The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP026597	Clostridioides difficile strain 10-00078 chromosome, complete genome	4119749	285640	301826	4119749		Synechococcus_phage(23.08%)	14	NA	NA
WP_009888043.1|285640_286153_-	nitroreductase family protein	NA	A0A1V0E011	Clostridioides_phage	87.1	2.3e-83
WP_003425290.1|286602_287079_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.8	6.9e-26
WP_003420966.1|287084_287783_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	43.9	1.5e-45
WP_003425288.1|287794_289162_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.0	2.6e-49
WP_003425286.1|289155_290232_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.2	1.7e-64
WP_003436064.1|290225_290819_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.4	4.3e-25
WP_009892582.1|290811_292344_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	49.7	2.3e-38
WP_009888045.1|292354_293605_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_009888046.1|293629_297436_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	24.1	3.0e-31
WP_009888047.1|297641_298514_+	dTDP-4-dehydrorhamnose reductase	NA	H9NCE8	Sphingomonas_phage	30.0	3.8e-14
WP_009888048.1|298622_299504_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	61.9	8.2e-97
WP_009888049.1|299540_300098_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.0	1.3e-47
WP_009888050.1|300135_301119_+	dTDP-glucose 4,6-dehydratase	NA	A0A291LAD7	Escherichia_phage	47.9	9.2e-81
WP_009888051.1|301157_301826_+	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	47.7	4.1e-24
>prophage 2
NZ_CP026597	Clostridioides difficile strain 10-00078 chromosome, complete genome	4119749	466583	473212	4119749	transposase,integrase	Clostridium_phage(33.33%)	7	457921:457936	478993:479008
457921:457936	attL	TAGCTAAATTCCAAAA	NA	NA	NA	NA
WP_009888265.1|466583_467939_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	34.4	8.8e-58
WP_009888266.1|468020_468236_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIE1	Clostridium_phage	68.1	7.0e-10
WP_009888268.1|468461_469496_+	YHYH domain-containing protein	NA	NA	NA	NA	NA
WP_003426228.1|469582_469786_+	DUF4236 domain-containing protein	NA	A0A0A8WIL0	Clostridium_phage	74.1	1.5e-14
WP_009888269.1|469956_471117_+	cell wall-binding protein Cwp27	NA	A0A2R2ZGK6	Clostridioides_phage	47.9	5.0e-70
WP_009892621.1|471647_472547_-|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	60.7	2.7e-79
WP_009892623.1|472540_473212_-	helix-turn-helix domain-containing protein	NA	A0A0C5AJ29	Paenibacillus_phage	43.0	1.4e-43
478993:479008	attR	TTTTGGAATTTAGCTA	NA	NA	NA	NA
>prophage 3
NZ_CP026597	Clostridioides difficile strain 10-00078 chromosome, complete genome	4119749	588698	659427	4119749	tRNA,transposase,protease,coat	Streptococcus_phage(33.33%)	54	NA	NA
WP_003425122.1|588698_589415_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003436985.1|589493_590804_+	methylase	NA	NA	NA	NA	NA
WP_003425127.1|590903_591440_+	signal peptidase I	NA	NA	NA	NA	NA
WP_003425129.1|591605_592142_+	signal peptidase I	NA	NA	NA	NA	NA
WP_009888346.1|592151_592907_+	TIM barrel protein	NA	NA	NA	NA	NA
WP_009888347.1|592980_594648_+	nucleoside kinase	NA	NA	NA	NA	NA
WP_003417962.1|595228_596158_+	glutaminase A	NA	NA	NA	NA	NA
WP_003417965.1|596255_596819_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009888348.1|597306_598143_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.5	2.1e-30
WP_009888349.1|598394_599390_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_009888350.1|599646_600051_-	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA	NA
WP_009888351.1|601050_601965_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_009888352.1|602070_604308_+	ATP-binding protein	NA	A0A2H4UU76	Bodo_saltans_virus	32.7	9.9e-06
WP_025984766.1|604939_605557_+	endonuclease III	NA	NA	NA	NA	NA
WP_003429657.1|605750_606221_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_009888355.1|606256_607105_+	DegV family protein	NA	NA	NA	NA	NA
WP_009892666.1|607477_608482_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_009888358.1|608606_609719_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003439005.1|610140_610902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003417993.1|610904_611723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003439009.1|611902_612505_+	DUF445 family protein	NA	NA	NA	NA	NA
WP_009888359.1|613367_615287_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	39.9	1.3e-144
WP_100882489.1|616716_616866_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012816012.1|617222_618341_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	53.2	2.2e-110
WP_009888362.1|619338_620376_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_009888365.1|621065_621386_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009888366.1|621746_623087_+	sensor histidine kinase	NA	X5JAC0	Clostridium_phage	38.8	2.4e-79
WP_009888368.1|623764_624334_-	hydrolase	NA	NA	NA	NA	NA
WP_009888369.1|624494_625745_-	MFS transporter	NA	NA	NA	NA	NA
WP_074014400.1|626036_626624_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009888371.1|626945_628406_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_003429639.1|628779_629385_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009888372.1|629387_631955_+	pyruvate, phosphate dikinase	NA	A0A1V0SGR7	Hokovirus	39.6	4.1e-48
WP_003437599.1|631947_632112_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888376.1|633220_633496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429630.1|633515_633803_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009892676.1|635357_636467_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	53.8	3.1e-109
WP_009888381.1|636531_638655_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888382.1|638669_643880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888383.1|644104_646204_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	28.8	2.2e-68
WP_009892678.1|646246_646642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003438914.1|647702_647891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888386.1|648075_648516_-	DUF3788 domain-containing protein	NA	NA	NA	NA	NA
WP_009888387.1|648851_650165_+	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	41.0	1.6e-93
WP_009888388.1|650182_650719_+	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	70.3	4.2e-64
WP_009888389.1|651237_651459_+|coat	spore coat associated protein CotJA	coat	NA	NA	NA	NA
WP_009888390.1|651458_651722_+|coat	spore coat protein CotJB	coat	NA	NA	NA	NA
WP_003418062.1|651783_652356_+	manganese catalase family protein	NA	NA	NA	NA	NA
WP_009888391.1|653173_653707_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.0	7.0e-35
WP_009888392.1|653931_654111_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_012816016.1|654717_654966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888395.1|655813_656227_+	DUF3795 domain-containing protein	NA	NA	NA	NA	NA
WP_009888396.1|656301_656811_+	GrpB family protein	NA	NA	NA	NA	NA
WP_009888399.1|658317_659427_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	54.3	6.6e-112
>prophage 4
NZ_CP026597	Clostridioides difficile strain 10-00078 chromosome, complete genome	4119749	1393419	1466003	4119749	portal,tail,tRNA,protease,plate,integrase	Clostridium_phage(46.15%)	68	1387824:1387842	1430970:1430988
1387824:1387842	attL	ATGAAAAAAAATTTAGAAG	NA	NA	NA	NA
WP_009889097.1|1393419_1394325_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_009889098.1|1394455_1395385_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_011861174.1|1395384_1395483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003419491.1|1395488_1395746_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_009889099.1|1395985_1396831_+	DegV family protein	NA	NA	NA	NA	NA
WP_003438316.1|1396955_1399067_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003438319.1|1399332_1400076_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_009889101.1|1400233_1401481_+	insulinase family protein	NA	G3MBJ8	Bacillus_virus	35.1	6.6e-52
WP_003419503.1|1401515_1401761_+	YlmC/YmxH family sporulation protein	NA	NA	NA	NA	NA
WP_009889103.1|1401770_1402994_+	aspartate kinase	NA	NA	NA	NA	NA
WP_003428224.1|1403106_1403841_+|protease	Clp protease	protease	NA	NA	NA	NA
WP_009889104.1|1403963_1406375_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	50.4	3.3e-92
WP_009889105.1|1406377_1407436_+|tRNA	tRNA 2-selenouridine(34) synthase MnmH	tRNA	NA	NA	NA	NA
WP_009892976.1|1407429_1408764_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_009889106.1|1408750_1409293_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003428218.1|1409580_1410627_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	63.5	2.7e-123
WP_003428216.1|1410802_1412344_+	ribonuclease Y	NA	NA	NA	NA	NA
WP_003438344.1|1412978_1414760_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_009889108.1|1414841_1415372_-	signal peptidase I	NA	NA	NA	NA	NA
WP_009889109.1|1415411_1416236_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_009889110.1|1416492_1417401_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_009889111.1|1417544_1418990_+	adenylosuccinate lyase	NA	NA	NA	NA	NA
WP_003419561.1|1419300_1419753_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009889112.1|1420164_1421742_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_011861180.1|1422790_1424131_+	6-phospho-alpha-glucosidase	NA	NA	NA	NA	NA
WP_003438357.1|1424242_1425439_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_009889113.1|1425823_1426774_+	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_003438367.1|1426934_1427687_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	45.6	1.9e-57
WP_009889114.1|1427778_1428555_-	exonuclease domain-containing protein	NA	NA	NA	NA	NA
WP_003428202.1|1428869_1430768_+	glutamine synthetase	NA	NA	NA	NA	NA
WP_009889116.1|1432216_1432549_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
1430970:1430988	attR	CTTCTAAATTTTTTTTCAT	NA	NA	NA	NA
WP_012816112.1|1432535_1433594_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_009889118.1|1433586_1434657_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_003428196.1|1434758_1435295_+	lipoprotein	NA	NA	NA	NA	NA
WP_009889121.1|1435411_1436119_+	lantibiotic protection ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	48.0	3.6e-55
WP_009889122.1|1436120_1436837_+	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	NA	NA	NA	NA
WP_009889124.1|1436838_1437597_+	lantibiotic immunity ABC transporter MutG family permease subunit	NA	NA	NA	NA	NA
WP_009889126.1|1437740_1439129_+	two-component system sensor histidine kinase	NA	NA	NA	NA	NA
WP_003428191.1|1439204_1440026_-	pyridoxamine kinase	NA	NA	NA	NA	NA
WP_009892989.1|1440276_1441431_+	amidase domain-containing protein	NA	NA	NA	NA	NA
WP_003419624.1|1441613_1441814_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	66.2	2.7e-16
WP_009889129.1|1442234_1442663_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_009889131.1|1442805_1443561_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_009889132.1|1443681_1444098_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003428186.1|1444261_1444768_-	hypothetical protein	NA	A0A0A8WEK1	Clostridium_phage	67.1	4.0e-56
WP_003428185.1|1444849_1445170_-	XRE family transcriptional regulator	NA	A0A0A8WE28	Clostridium_phage	54.5	3.7e-23
WP_003419641.1|1445338_1445536_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009889133.1|1445640_1446081_+	hypothetical protein	NA	A0A090EUN5	Clostridium_phage	51.4	4.6e-32
WP_009889135.1|1446329_1446773_+	hypothetical protein	NA	A0A1V0DZX9	Clostridioides_phage	36.7	7.6e-19
WP_009889137.1|1446777_1447842_+|portal	phage portal protein	portal	A0A1V0DZX4	Clostridioides_phage	52.8	2.6e-97
WP_003419646.1|1447855_1448284_+|tail	phage tail tube protein	tail	A0A1V0DZX1	Clostridioides_phage	51.8	2.8e-34
WP_009889139.1|1448397_1448844_+|portal	phage portal protein	portal	A0A0A7RTP2	Clostridium_phage	36.4	1.1e-12
WP_003419648.1|1448870_1449038_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009889143.1|1451489_1451912_+	hypothetical protein	NA	A0A090DBR9	Clostridium_phage	70.4	2.2e-52
WP_009889145.1|1452193_1453723_+	cell wall XkdQ hydrolase	NA	A0A1V0DZX6	Clostridioides_phage	81.1	1.0e-243
WP_003438447.1|1453738_1454065_+	DUF2577 domain-containing protein	NA	J9QE86	Clostridium_phage	94.4	1.0e-52
WP_003428161.1|1454064_1454493_+	DUF2634 domain-containing protein	NA	A0A0A8WJ32	Clostridium_phage	82.4	5.8e-64
WP_009889148.1|1454485_1455538_+|plate	baseplate J/gp47 family protein	plate	A0A0A8WFP3	Clostridium_phage	71.3	9.3e-140
WP_009889149.1|1455534_1456233_+	DUF2313 domain-containing protein	NA	A0A090D815	Clostridium_phage	56.9	3.3e-48
WP_009889153.1|1456233_1457220_+|tail	phage tail protein	tail	A0A2H4J039	uncultured_Caudovirales_phage	45.8	3.4e-59
WP_009892995.1|1457241_1462419_+	chromosome condensation regulator	NA	A0A0A8WEY5	Clostridium_phage	28.3	8.2e-88
WP_009889155.1|1462435_1462789_+	hypothetical protein	NA	A0A0A8WJF2	Clostridium_phage	42.1	4.2e-12
WP_003419670.1|1463051_1463312_+	hypothetical protein	NA	E2ELK7	Clostridium_phage	90.6	9.9e-35
WP_003419674.1|1463536_1463992_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003438466.1|1464219_1464639_-	helix-turn-helix transcriptional regulator	NA	S5MUV6	Brevibacillus_phage	37.2	5.4e-06
WP_003428146.1|1464937_1465147_+	helix-turn-helix transcriptional regulator	NA	Q5YAA3	Bacillus_phage	47.2	5.9e-06
WP_003428145.1|1465166_1465388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009889162.1|1465604_1466003_-	helix-turn-helix domain-containing protein	NA	A0A1L2JY18	Aeribacillus_phage	29.7	2.7e-07
>prophage 5
NZ_CP026597	Clostridioides difficile strain 10-00078 chromosome, complete genome	4119749	1548696	1557241	4119749		Pandoravirus(33.33%)	9	NA	NA
WP_009889249.1|1548696_1549281_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	52.6	4.2e-57
WP_074014342.1|1549273_1550632_+	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	41.2	3.0e-37
WP_003438634.1|1550621_1551365_+	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
WP_003429416.1|1552125_1552698_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	51.6	3.0e-44
WP_012816129.1|1552751_1553555_+	dihydropteroate synthase	NA	S4W084	Pandoravirus	28.6	2.4e-23
WP_009889257.1|1553565_1553931_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_009889259.1|1553923_1554430_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_009893063.1|1554410_1555196_+	3-deoxy-7-phosphoheptulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	27.9	1.0e-13
WP_009893065.1|1555450_1557241_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	32.8	5.6e-52
>prophage 6
NZ_CP026597	Clostridioides difficile strain 10-00078 chromosome, complete genome	4119749	1684652	1739782	4119749	portal,tail,holin,terminase,plate,integrase	Clostridium_phage(78.18%)	67	1678655:1678670	1687875:1687890
1678655:1678670	attL	ATATAAAAGAGCAGAT	NA	NA	NA	NA
WP_003429803.1|1684652_1685783_-|integrase	site-specific integrase	integrase	A0A0A8WIE1	Clostridium_phage	99.7	2.9e-216
WP_009888800.1|1685861_1686569_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888801.1|1686581_1687451_-	protein kinase	NA	NA	NA	NA	NA
WP_003429804.1|1688070_1688577_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A8WEK1	Clostridium_phage	100.0	1.5e-87
1687875:1687890	attR	ATATAAAAGAGCAGAT	NA	NA	NA	NA
WP_009893126.1|1688652_1689201_-	helix-turn-helix domain-containing protein	NA	A0A0A8WJ60	Clostridium_phage	98.4	2.2e-92
WP_009888806.1|1689212_1689554_-	XRE family transcriptional regulator	NA	A0A0A8WE28	Clostridium_phage	100.0	7.6e-59
WP_009893129.1|1689730_1689934_+	helix-turn-helix domain-containing protein	NA	A0A0A8WHR3	Clostridium_phage	100.0	3.7e-29
WP_009888810.1|1689981_1690791_+	phage antirepressor	NA	A0A0A8WIE3	Clostridium_phage	97.4	1.0e-146
WP_009888812.1|1690837_1691047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003433505.1|1691056_1691431_-	hypothetical protein	NA	A0A1L5C299	Pseudoalteromonas_phage	37.1	2.2e-11
WP_009888813.1|1691506_1691704_+	helix-turn-helix transcriptional regulator	NA	A0A0A8WE47	Clostridium_phage	92.3	2.9e-26
WP_009888815.1|1691734_1692127_+	helix-turn-helix domain-containing protein	NA	A0A0A8WHS2	Clostridium_phage	93.0	9.6e-58
WP_003429817.1|1692107_1692257_+	hypothetical protein	NA	A0A0A8WIF8	Clostridium_phage	89.4	4.2e-14
WP_003433513.1|1692327_1692765_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888818.1|1692776_1693943_+	DUF2800 domain-containing protein	NA	S5MUB5	Brevibacillus_phage	55.9	1.5e-117
WP_009888819.1|1693957_1694293_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429822.1|1694345_1694918_+	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA	NA
WP_003433516.1|1694940_1695513_+	DUF2815 family protein	NA	S5MC21	Brevibacillus_phage	66.7	8.5e-63
WP_009888821.1|1695512_1697471_+	DNA polymerase	NA	A0A0A7RTL3	Clostridium_phage	69.1	7.8e-265
WP_009888822.1|1697482_1699900_+	virulence-associated protein E	NA	A0A0A7RTG3	Clostridium_phage	67.7	0.0e+00
WP_003433522.1|1700181_1700508_+	VRR-NUC domain-containing protein	NA	A0A2K5B272	Erysipelothrix_phage	55.4	8.7e-20
WP_009888823.1|1700456_1701827_+	DEAD/DEAH box helicase	NA	A0A1S7FYY5	Listeria_phage	60.0	8.4e-157
WP_009888825.1|1701980_1702460_+	hypothetical protein	NA	I2E8Y5	Clostridium_phage	51.0	4.4e-36
WP_009888827.1|1703486_1704461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429834.1|1704481_1704991_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888829.1|1705060_1705753_+	helix-turn-helix domain-containing protein	NA	A0A0A8WFS6	Clostridium_phage	97.0	7.0e-120
WP_009888830.1|1705742_1706984_+|terminase	PBSX family phage terminase large subunit	terminase	X5JAB3	Clostridium_phage	98.3	1.1e-243
WP_009888831.1|1706989_1708432_+|portal	phage portal protein	portal	A0A0A8WIH2	Clostridium_phage	97.7	3.0e-274
WP_009893134.1|1708421_1709957_+	hypothetical protein	NA	X5JAI9	Clostridium_phage	71.9	2.5e-194
WP_009888832.1|1709958_1710207_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888833.1|1710274_1710838_+	scaffold protein	NA	A0A0A8WFU8	Clostridium_phage	93.6	6.0e-85
WP_009888834.1|1710849_1711740_+	hypothetical protein	NA	X5J9Z5	Clostridium_phage	99.3	1.4e-165
WP_009888835.1|1711758_1711992_+	hypothetical protein	NA	A0A0A8WFD0	Clostridium_phage	93.5	4.6e-31
WP_009888836.1|1712001_1712403_+	hypothetical protein	NA	X5JAJ0	Clostridium_phage	97.0	8.1e-68
WP_003433540.1|1712396_1712744_+	hypothetical protein	NA	X5JAV9	Clostridium_phage	99.1	1.1e-57
WP_009893135.1|1712743_1713034_+	HK97 gp10 family phage protein	NA	A0A0A8WFV8	Clostridium_phage	96.7	4.1e-45
WP_009888838.1|1713143_1713950_+	hypothetical protein	NA	F8UBL7	Clostridium_phage	48.0	2.4e-47
WP_009888839.1|1714298_1714736_+	hypothetical protein	NA	A0A0A8WJT3	Clostridium_phage	95.2	3.3e-75
WP_009888840.1|1714728_1714905_+	hypothetical protein	NA	X5J9Z6	Clostridium_phage	93.1	1.1e-21
WP_009893136.1|1714905_1716216_+	hypothetical protein	NA	X5JAJ1	Clostridium_phage	92.7	8.1e-234
WP_009888843.1|1716760_1717588_+	hypothetical protein	NA	A0A2R4P8H7	Staphylococcus_phage	48.3	1.8e-45
WP_003429853.1|1717659_1718100_+|portal	phage portal protein	portal	X5JAB6	Clostridium_phage	63.7	8.6e-47
WP_011861033.1|1718099_1718294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429855.1|1718440_1718602_+	hypothetical protein	NA	A0A0A8WE04	Clostridium_phage	84.3	1.2e-14
WP_003429858.1|1719938_1720127_+	hypothetical protein	NA	X5JAJ2	Clostridium_phage	96.8	2.2e-23
WP_009888845.1|1720245_1721112_+	hypothetical protein	NA	X5JAW1	Clostridium_phage	80.1	3.2e-130
WP_009888846.1|1721164_1721299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888847.1|1721976_1722504_+	DUF4352 domain-containing protein	NA	A0A0A8WJ63	Clostridium_phage	97.1	8.7e-62
WP_009888848.1|1722641_1723409_+	DUF4428 domain-containing protein	NA	X5JB37	Clostridium_phage	44.4	6.3e-45
WP_009893138.1|1723474_1725847_+	tape measure protein	NA	X5JAB7	Clostridium_phage	41.5	8.8e-146
WP_009888849.1|1725863_1726553_+	LysM peptidoglycan-binding domain-containing protein	NA	X5J9Z8	Clostridium_phage	94.8	2.0e-119
WP_009893140.1|1726545_1728438_+	cell wall hydrolase	NA	A3QSB3	Clostridium_virus	94.8	0.0e+00
WP_009893142.1|1728451_1728712_+	DUF2577 domain-containing protein	NA	A0A0A8WJ65	Clostridium_phage	86.0	1.4e-33
WP_009888851.1|1728716_1729136_+	DUF2634 domain-containing protein	NA	A0A0A8WJV8	Clostridium_phage	95.7	1.3e-71
WP_009888852.1|1729136_1730186_+|plate	baseplate J/gp47 family protein	plate	A0A0A8WFK0	Clostridium_phage	94.8	1.0e-186
WP_003433579.1|1730178_1730796_+	YmfQ family protein	NA	A0A0A8WII4	Clostridium_phage	98.0	8.8e-114
WP_009888853.1|1730807_1731833_+|tail	phage tail protein	tail	A3QSB7	Clostridium_virus	87.8	9.1e-140
WP_009893144.1|1731849_1733376_+	hypothetical protein	NA	B6SBV0	Clostridium_virus	60.8	1.3e-89
WP_009889429.1|1733390_1733684_+	hypothetical protein	NA	E2ELK3	Clostridium_phage	77.9	2.2e-38
WP_009889431.1|1733683_1733866_+	hypothetical protein	NA	A3QSC3	Clostridium_virus	95.0	5.5e-24
WP_009889434.1|1733899_1734466_+	hypothetical protein	NA	A0A0A8WFF2	Clostridium_phage	77.8	3.6e-37
WP_009889435.1|1734496_1734787_+	hypothetical protein	NA	A0A0A8WIF5	Clostridium_phage	95.8	6.9e-45
WP_009889440.1|1734790_1735048_+|holin	holin	holin	A3QSC5	Clostridium_virus	100.0	1.1e-41
WP_003429958.1|1735308_1736172_+	Abi family protein	NA	A3QSC6	Clostridium_virus	99.7	8.4e-163
WP_009889444.1|1736250_1737063_+	N-acetylmuramoyl-L-alanine amidase	NA	X5JAJ5	Clostridium_phage	97.4	9.7e-153
WP_009893147.1|1737156_1739556_+	cell wall-binding repeat-containing protein	NA	NA	NA	NA	NA
WP_003433687.1|1739596_1739782_-	hypothetical protein	NA	A0A0A8WHQ4	Clostridium_phage	62.1	7.6e-13
>prophage 7
NZ_CP026597	Clostridioides difficile strain 10-00078 chromosome, complete genome	4119749	3845220	3859052	4119749	transposase,portal	Clostridioides_phage(83.33%)	17	NA	NA
WP_009888243.1|3845220_3846360_+	Fic family protein	NA	A0A1V0E025	Clostridioides_phage	91.8	4.9e-195
WP_009888245.1|3846692_3847268_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888246.1|3847278_3847467_+	hypothetical protein	NA	A0A1V0E014	Clostridioides_phage	96.8	5.3e-22
WP_009888247.1|3847661_3848219_+	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	97.8	4.1e-94
WP_012816430.1|3848518_3849262_+	hypothetical protein	NA	A0A1V0DZW7	Clostridioides_phage	92.3	4.3e-131
WP_021396478.1|3849457_3849676_+	hypothetical protein	NA	A0A1V0DZW7	Clostridioides_phage	94.4	6.8e-37
WP_012816431.1|3849715_3850258_+	hypothetical protein	NA	A0A1V0DZW7	Clostridioides_phage	95.0	8.3e-92
WP_009888248.1|3850352_3851558_+|portal	phage portal protein	portal	A0A1V0DZW8	Clostridioides_phage	95.0	2.0e-210
WP_009888251.1|3852086_3852530_-	hypothetical protein	NA	A0A1V0DZZ2	Clostridioides_phage	82.6	4.3e-62
WP_009888252.1|3852747_3853191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888253.1|3853212_3853530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012816432.1|3853719_3854382_-	DUF4367 domain-containing protein	NA	A0A1V0DZZ4	Clostridioides_phage	76.2	4.4e-87
WP_009888255.1|3854413_3854956_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1V0DZZ1	Clostridioides_phage	96.7	3.8e-89
WP_009888256.1|3855195_3855378_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888257.1|3855405_3856017_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012816433.1|3856493_3857708_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	7.9e-50
WP_003437815.1|3857894_3859052_-	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	28.5	8.4e-17
>prophage 8
NZ_CP026597	Clostridioides difficile strain 10-00078 chromosome, complete genome	4119749	4030779	4044290	4119749		Streptococcus_phage(90.0%)	17	NA	NA
WP_009892195.1|4030779_4031103_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	73.5	1.7e-39
WP_009892197.1|4031117_4031501_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	66.1	6.3e-38
WP_009892199.1|4031596_4032010_+	DUF3788 domain-containing protein	NA	NA	NA	NA	NA
WP_009892201.1|4032116_4032575_+	glyoxalase	NA	NA	NA	NA	NA
WP_009892206.1|4032599_4033142_+	DUF3795 domain-containing protein	NA	NA	NA	NA	NA
WP_009892207.1|4033198_4033705_+	YcxB family protein	NA	NA	NA	NA	NA
WP_012816450.1|4033814_4035209_+	cell division protein FtsK	NA	A0A1S5SFB5	Streptococcus_phage	66.8	1.3e-178
WP_009892210.1|4035488_4036610_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	62.7	1.3e-134
WP_009892216.1|4036616_4036751_+	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_006354966.1|4036751_4036973_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	86.3	1.2e-28
WP_009892220.1|4037292_4037931_+	chloramphenicol acetyltransferase CAT	NA	G3CFL0	Escherichia_phage	35.3	7.6e-36
WP_009892222.1|4038007_4038196_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009892224.1|4038216_4038714_+	conjugal transfer protein	NA	A0A1S5SF25	Streptococcus_phage	41.2	1.3e-27
WP_009892226.1|4038729_4039233_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	47.6	4.4e-39
WP_153300386.1|4039195_4039336_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009892227.1|4039345_4039735_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	73.8	8.1e-49
WP_009892229.1|4042154_4044290_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	58.6	1.3e-177
