The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP026599	Clostridioides difficile strain 09-00072 chromosome, complete genome	4119929	285637	301823	4119929		Synechococcus_phage(23.08%)	14	NA	NA
WP_009888043.1|285637_286150_-	nitroreductase family protein	NA	A0A1V0E011	Clostridioides_phage	87.1	2.3e-83
WP_003425290.1|286599_287076_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.8	6.9e-26
WP_003420966.1|287081_287780_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	43.9	1.5e-45
WP_003425288.1|287791_289159_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.0	2.6e-49
WP_003425286.1|289152_290229_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.2	1.7e-64
WP_003436064.1|290222_290816_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.4	4.3e-25
WP_009892582.1|290808_292341_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	49.7	2.3e-38
WP_009888045.1|292351_293602_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_009888046.1|293626_297433_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	24.1	3.0e-31
WP_009888047.1|297638_298511_+	dTDP-4-dehydrorhamnose reductase	NA	H9NCE8	Sphingomonas_phage	30.0	3.8e-14
WP_009888048.1|298619_299501_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	61.9	8.2e-97
WP_009888049.1|299537_300095_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.0	1.3e-47
WP_009888050.1|300132_301116_+	dTDP-glucose 4,6-dehydratase	NA	A0A291LAD7	Escherichia_phage	47.9	9.2e-81
WP_009888051.1|301154_301823_+	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	47.7	4.1e-24
>prophage 2
NZ_CP026599	Clostridioides difficile strain 09-00072 chromosome, complete genome	4119929	588696	659411	4119929	coat,tRNA,transposase,protease	Streptococcus_phage(33.33%)	55	NA	NA
WP_003425122.1|588696_589413_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003436985.1|589491_590802_+	methylase	NA	NA	NA	NA	NA
WP_003425127.1|590901_591438_+	signal peptidase I	NA	NA	NA	NA	NA
WP_003425129.1|591603_592140_+	signal peptidase I	NA	NA	NA	NA	NA
WP_009888346.1|592149_592905_+	TIM barrel protein	NA	NA	NA	NA	NA
WP_009888347.1|592978_594646_+	nucleoside kinase	NA	NA	NA	NA	NA
WP_003417962.1|595210_596140_+	glutaminase A	NA	NA	NA	NA	NA
WP_003417965.1|596237_596801_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009888348.1|597288_598125_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.5	2.1e-30
WP_009888349.1|598376_599372_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_009888350.1|599628_600033_-	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA	NA
WP_009888351.1|601032_601947_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_009888352.1|602052_604290_+	ATP-binding protein	NA	A0A2H4UU76	Bodo_saltans_virus	32.7	9.9e-06
WP_025984766.1|604921_605539_+	endonuclease III	NA	NA	NA	NA	NA
WP_003429657.1|605732_606203_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_009888355.1|606238_607087_+	DegV family protein	NA	NA	NA	NA	NA
WP_009892666.1|607459_608464_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_009888358.1|608588_609701_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003439005.1|610123_610885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003417993.1|610887_611706_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003439009.1|611885_612488_+	DUF445 family protein	NA	NA	NA	NA	NA
WP_009888359.1|613350_615270_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	39.9	1.3e-144
WP_100882489.1|616699_616849_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012816012.1|617205_618324_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	53.2	2.2e-110
WP_009888362.1|619321_620359_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_009888364.1|620351_621038_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888365.1|621049_621370_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009888366.1|621730_623071_+	sensor histidine kinase	NA	X5JAC0	Clostridium_phage	38.8	2.4e-79
WP_009888368.1|623748_624318_-	hydrolase	NA	NA	NA	NA	NA
WP_009888369.1|624478_625729_-	MFS transporter	NA	NA	NA	NA	NA
WP_074014400.1|626020_626608_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009888371.1|626929_628390_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_003429639.1|628763_629369_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009888372.1|629371_631939_+	pyruvate, phosphate dikinase	NA	A0A1V0SGR7	Hokovirus	39.6	4.1e-48
WP_003437599.1|631931_632096_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888376.1|633204_633480_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429630.1|633499_633787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009892676.1|635341_636451_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	53.8	3.1e-109
WP_009888381.1|636515_638639_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888382.1|638653_643864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888383.1|644088_646188_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	28.8	2.2e-68
WP_009892678.1|646230_646626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003438914.1|647686_647875_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888386.1|648059_648500_-	DUF3788 domain-containing protein	NA	NA	NA	NA	NA
WP_009888387.1|648835_650149_+	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	41.0	1.6e-93
WP_009888388.1|650166_650703_+	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	70.3	4.2e-64
WP_009888389.1|651221_651443_+|coat	spore coat associated protein CotJA	coat	NA	NA	NA	NA
WP_009888390.1|651442_651706_+|coat	spore coat protein CotJB	coat	NA	NA	NA	NA
WP_003418062.1|651767_652340_+	manganese catalase family protein	NA	NA	NA	NA	NA
WP_009888391.1|653157_653691_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.0	7.0e-35
WP_009888392.1|653915_654095_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_012816016.1|654701_654950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888395.1|655797_656211_+	DUF3795 domain-containing protein	NA	NA	NA	NA	NA
WP_009888396.1|656285_656795_+	GrpB family protein	NA	NA	NA	NA	NA
WP_009888399.1|658301_659411_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	54.3	6.6e-112
>prophage 3
NZ_CP026599	Clostridioides difficile strain 09-00072 chromosome, complete genome	4119929	1403062	1465961	4119929	tRNA,integrase,tail,protease,portal,plate	Clostridium_phage(46.15%)	61	1408220:1408236	1469390:1469406
WP_003428224.1|1403062_1403797_+|protease	Clp protease	protease	NA	NA	NA	NA
WP_009889104.1|1403919_1406331_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	50.4	3.3e-92
WP_009889105.1|1406333_1407392_+|tRNA	tRNA 2-selenouridine(34) synthase MnmH	tRNA	NA	NA	NA	NA
WP_009892976.1|1407385_1408720_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
1408220:1408236	attL	AAAGAAGATATATTAAA	NA	NA	NA	NA
WP_009889106.1|1408706_1409249_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003428218.1|1409536_1410583_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	63.5	2.7e-123
WP_003428216.1|1410758_1412300_+	ribonuclease Y	NA	NA	NA	NA	NA
WP_003438344.1|1412934_1414716_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_009889108.1|1414797_1415328_-	signal peptidase I	NA	NA	NA	NA	NA
WP_009889109.1|1415367_1416192_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_009889110.1|1416448_1417357_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_009889111.1|1417500_1418946_+	adenylosuccinate lyase	NA	NA	NA	NA	NA
WP_003419561.1|1419256_1419709_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009889112.1|1420121_1421699_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_009892977.1|1421857_1422610_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011861180.1|1422748_1424089_+	6-phospho-alpha-glucosidase	NA	NA	NA	NA	NA
WP_003438357.1|1424200_1425397_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_009889113.1|1425781_1426732_+	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_003438367.1|1426892_1427645_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	45.6	1.9e-57
WP_009889114.1|1427736_1428513_-	exonuclease domain-containing protein	NA	NA	NA	NA	NA
WP_003428202.1|1428827_1430726_+	glutamine synthetase	NA	NA	NA	NA	NA
WP_003428201.1|1430853_1431975_-	galactosyldiacylglycerol synthase	NA	NA	NA	NA	NA
WP_009889116.1|1432173_1432506_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012816112.1|1432492_1433551_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_009889118.1|1433543_1434614_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_003428196.1|1434715_1435252_+	lipoprotein	NA	NA	NA	NA	NA
WP_009889121.1|1435368_1436076_+	lantibiotic protection ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	48.0	3.6e-55
WP_009889122.1|1436077_1436794_+	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	NA	NA	NA	NA
WP_009889124.1|1436795_1437554_+	lantibiotic immunity ABC transporter MutG family permease subunit	NA	NA	NA	NA	NA
WP_009889126.1|1437697_1439086_+	two-component system sensor histidine kinase	NA	NA	NA	NA	NA
WP_003428191.1|1439161_1439983_-	pyridoxamine kinase	NA	NA	NA	NA	NA
WP_009892989.1|1440233_1441388_+	amidase domain-containing protein	NA	NA	NA	NA	NA
WP_003419624.1|1441570_1441771_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	66.2	2.7e-16
WP_009889129.1|1442191_1442620_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_009889131.1|1442762_1443518_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_009889132.1|1443638_1444055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003428186.1|1444218_1444725_-	hypothetical protein	NA	A0A0A8WEK1	Clostridium_phage	67.1	4.0e-56
WP_003428185.1|1444806_1445127_-	XRE family transcriptional regulator	NA	A0A0A8WE28	Clostridium_phage	54.5	3.7e-23
WP_003419641.1|1445295_1445493_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009889133.1|1445597_1446038_+	hypothetical protein	NA	A0A090EUN5	Clostridium_phage	51.4	4.6e-32
WP_009889135.1|1446286_1446730_+	hypothetical protein	NA	A0A1V0DZX9	Clostridioides_phage	36.7	7.6e-19
WP_009889137.1|1446734_1447799_+|portal	phage portal protein	portal	A0A1V0DZX4	Clostridioides_phage	52.8	2.6e-97
WP_003419646.1|1447812_1448241_+|tail	phage tail tube protein	tail	A0A1V0DZX1	Clostridioides_phage	51.8	2.8e-34
WP_009889139.1|1448354_1448801_+|portal	phage portal protein	portal	A0A0A7RTP2	Clostridium_phage	36.4	1.1e-12
WP_003419648.1|1448827_1448995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009889141.1|1448994_1451448_+	hypothetical protein	NA	A0A1V0DZX3	Clostridioides_phage	61.0	6.1e-17
WP_009889143.1|1451447_1451870_+	hypothetical protein	NA	A0A090DBR9	Clostridium_phage	70.4	2.2e-52
WP_009889145.1|1452151_1453681_+	cell wall XkdQ hydrolase	NA	A0A1V0DZX6	Clostridioides_phage	81.1	1.0e-243
WP_003438447.1|1453696_1454023_+	DUF2577 domain-containing protein	NA	J9QE86	Clostridium_phage	94.4	1.0e-52
WP_003428161.1|1454022_1454451_+	DUF2634 domain-containing protein	NA	A0A0A8WJ32	Clostridium_phage	82.4	5.8e-64
WP_009889148.1|1454443_1455496_+|plate	baseplate J/gp47 family protein	plate	A0A0A8WFP3	Clostridium_phage	71.3	9.3e-140
WP_009889149.1|1455492_1456191_+	DUF2313 domain-containing protein	NA	A0A090D815	Clostridium_phage	56.9	3.3e-48
WP_009889153.1|1456191_1457178_+|tail	phage tail protein	tail	A0A2H4J039	uncultured_Caudovirales_phage	45.8	3.4e-59
WP_009892995.1|1457199_1462377_+	chromosome condensation regulator	NA	A0A0A8WEY5	Clostridium_phage	28.3	8.2e-88
WP_009889155.1|1462393_1462747_+	hypothetical protein	NA	A0A0A8WJF2	Clostridium_phage	42.1	4.2e-12
WP_003419670.1|1463009_1463270_+	hypothetical protein	NA	E2ELK7	Clostridium_phage	90.6	9.9e-35
WP_003419674.1|1463494_1463950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003438466.1|1464177_1464597_-	helix-turn-helix transcriptional regulator	NA	S5MUV6	Brevibacillus_phage	37.2	5.4e-06
WP_003428146.1|1464895_1465105_+	helix-turn-helix transcriptional regulator	NA	Q5YAA3	Bacillus_phage	47.2	5.9e-06
WP_003428145.1|1465124_1465346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009889162.1|1465562_1465961_-	helix-turn-helix domain-containing protein	NA	A0A1L2JY18	Aeribacillus_phage	29.7	2.7e-07
1469390:1469406	attR	TTTAATATATCTTCTTT	NA	NA	NA	NA
>prophage 4
NZ_CP026599	Clostridioides difficile strain 09-00072 chromosome, complete genome	4119929	1548653	1557198	4119929		Pandoravirus(33.33%)	10	NA	NA
WP_009889249.1|1548653_1549238_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	52.6	4.2e-57
WP_074014342.1|1549230_1550589_+	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	41.2	3.0e-37
WP_003438634.1|1550578_1551322_+	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
WP_009889253.1|1551355_1552057_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429416.1|1552082_1552655_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	51.6	3.0e-44
WP_012816129.1|1552708_1553512_+	dihydropteroate synthase	NA	S4W084	Pandoravirus	28.6	2.4e-23
WP_009889257.1|1553522_1553888_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_009889259.1|1553880_1554387_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_009893063.1|1554367_1555153_+	3-deoxy-7-phosphoheptulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	27.9	1.0e-13
WP_009893065.1|1555407_1557198_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	32.8	5.6e-52
>prophage 5
NZ_CP026599	Clostridioides difficile strain 09-00072 chromosome, complete genome	4119929	1684613	1739744	4119929	holin,integrase,tail,portal,terminase,plate	Clostridium_phage(78.57%)	68	1678616:1678631	1687836:1687851
1678616:1678631	attL	ATATAAAAGAGCAGAT	NA	NA	NA	NA
WP_003429803.1|1684613_1685744_-|integrase	site-specific integrase	integrase	A0A0A8WIE1	Clostridium_phage	99.7	2.9e-216
WP_009888800.1|1685822_1686530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888801.1|1686542_1687412_-	protein kinase	NA	NA	NA	NA	NA
WP_003429804.1|1688031_1688538_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A8WEK1	Clostridium_phage	100.0	1.5e-87
1687836:1687851	attR	ATATAAAAGAGCAGAT	NA	NA	NA	NA
WP_009893126.1|1688613_1689162_-	helix-turn-helix domain-containing protein	NA	A0A0A8WJ60	Clostridium_phage	98.4	2.2e-92
WP_009888806.1|1689173_1689515_-	XRE family transcriptional regulator	NA	A0A0A8WE28	Clostridium_phage	100.0	7.6e-59
WP_009893129.1|1689691_1689895_+	helix-turn-helix domain-containing protein	NA	A0A0A8WHR3	Clostridium_phage	100.0	3.7e-29
WP_009888810.1|1689942_1690752_+	phage antirepressor	NA	A0A0A8WIE3	Clostridium_phage	97.4	1.0e-146
WP_009888812.1|1690798_1691008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003433505.1|1691017_1691392_-	hypothetical protein	NA	A0A1L5C299	Pseudoalteromonas_phage	37.1	2.2e-11
WP_009888813.1|1691467_1691665_+	helix-turn-helix transcriptional regulator	NA	A0A0A8WE47	Clostridium_phage	92.3	2.9e-26
WP_009888815.1|1691695_1692088_+	helix-turn-helix domain-containing protein	NA	A0A0A8WHS2	Clostridium_phage	93.0	9.6e-58
WP_003429817.1|1692068_1692218_+	hypothetical protein	NA	A0A0A8WIF8	Clostridium_phage	89.4	4.2e-14
WP_003433513.1|1692288_1692726_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888818.1|1692737_1693904_+	DUF2800 domain-containing protein	NA	S5MUB5	Brevibacillus_phage	55.9	1.5e-117
WP_009888819.1|1693918_1694254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429822.1|1694306_1694879_+	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA	NA
WP_003433516.1|1694901_1695474_+	DUF2815 family protein	NA	S5MC21	Brevibacillus_phage	66.7	8.5e-63
WP_009888821.1|1695473_1697432_+	DNA polymerase	NA	A0A0A7RTL3	Clostridium_phage	69.1	7.8e-265
WP_009888822.1|1697443_1699861_+	virulence-associated protein E	NA	A0A0A7RTG3	Clostridium_phage	67.7	0.0e+00
WP_003433522.1|1700142_1700469_+	VRR-NUC domain-containing protein	NA	A0A2K5B272	Erysipelothrix_phage	55.4	8.7e-20
WP_009888823.1|1700417_1701788_+	DEAD/DEAH box helicase	NA	A0A1S7FYY5	Listeria_phage	60.0	8.4e-157
WP_009888825.1|1701941_1702421_+	hypothetical protein	NA	I2E8Y5	Clostridium_phage	51.0	4.4e-36
WP_009888827.1|1703447_1704422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429834.1|1704442_1704952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888829.1|1705021_1705714_+	helix-turn-helix domain-containing protein	NA	A0A0A8WFS6	Clostridium_phage	97.0	7.0e-120
WP_009888830.1|1705703_1706945_+|terminase	PBSX family phage terminase large subunit	terminase	X5JAB3	Clostridium_phage	98.3	1.1e-243
WP_009888831.1|1706950_1708393_+|portal	phage portal protein	portal	A0A0A8WIH2	Clostridium_phage	97.7	3.0e-274
WP_009893134.1|1708382_1709918_+	hypothetical protein	NA	X5JAI9	Clostridium_phage	71.9	2.5e-194
WP_009888832.1|1709919_1710168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888833.1|1710235_1710799_+	scaffold protein	NA	A0A0A8WFU8	Clostridium_phage	93.6	6.0e-85
WP_009888834.1|1710810_1711701_+	hypothetical protein	NA	X5J9Z5	Clostridium_phage	99.3	1.4e-165
WP_009888835.1|1711719_1711953_+	hypothetical protein	NA	A0A0A8WFD0	Clostridium_phage	93.5	4.6e-31
WP_009888836.1|1711962_1712364_+	hypothetical protein	NA	X5JAJ0	Clostridium_phage	97.0	8.1e-68
WP_003433540.1|1712357_1712705_+	hypothetical protein	NA	X5JAV9	Clostridium_phage	99.1	1.1e-57
WP_009893135.1|1712704_1712995_+	HK97 gp10 family phage protein	NA	A0A0A8WFV8	Clostridium_phage	96.7	4.1e-45
WP_009888838.1|1713104_1713911_+	hypothetical protein	NA	F8UBL7	Clostridium_phage	48.0	2.4e-47
WP_009888839.1|1714259_1714697_+	hypothetical protein	NA	A0A0A8WJT3	Clostridium_phage	95.2	3.3e-75
WP_009888840.1|1714689_1714866_+	hypothetical protein	NA	X5J9Z6	Clostridium_phage	93.1	1.1e-21
WP_009893136.1|1714866_1716177_+	hypothetical protein	NA	X5JAJ1	Clostridium_phage	92.7	8.1e-234
WP_009888842.1|1716193_1716664_+|tail	phage tail tube protein	tail	A0A0A8WJ62	Clostridium_phage	81.3	1.3e-69
WP_009888843.1|1716722_1717550_+	hypothetical protein	NA	A0A2R4P8H7	Staphylococcus_phage	48.3	1.8e-45
WP_003429853.1|1717621_1718062_+|portal	phage portal protein	portal	X5JAB6	Clostridium_phage	63.7	8.6e-47
WP_011861033.1|1718061_1718256_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429855.1|1718402_1718564_+	hypothetical protein	NA	A0A0A8WE04	Clostridium_phage	84.3	1.2e-14
WP_003429858.1|1719900_1720089_+	hypothetical protein	NA	X5JAJ2	Clostridium_phage	96.8	2.2e-23
WP_009888845.1|1720207_1721074_+	hypothetical protein	NA	X5JAW1	Clostridium_phage	80.1	3.2e-130
WP_009888846.1|1721126_1721261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888847.1|1721938_1722466_+	DUF4352 domain-containing protein	NA	A0A0A8WJ63	Clostridium_phage	97.1	8.7e-62
WP_009888848.1|1722603_1723371_+	DUF4428 domain-containing protein	NA	X5JB37	Clostridium_phage	44.4	6.3e-45
WP_009893138.1|1723436_1725809_+	tape measure protein	NA	X5JAB7	Clostridium_phage	41.5	8.8e-146
WP_009888849.1|1725825_1726515_+	LysM peptidoglycan-binding domain-containing protein	NA	X5J9Z8	Clostridium_phage	94.8	2.0e-119
WP_009893140.1|1726507_1728400_+	cell wall hydrolase	NA	A3QSB3	Clostridium_virus	94.8	0.0e+00
WP_009893142.1|1728413_1728674_+	DUF2577 domain-containing protein	NA	A0A0A8WJ65	Clostridium_phage	86.0	1.4e-33
WP_009888851.1|1728678_1729098_+	DUF2634 domain-containing protein	NA	A0A0A8WJV8	Clostridium_phage	95.7	1.3e-71
WP_009888852.1|1729098_1730148_+|plate	baseplate J/gp47 family protein	plate	A0A0A8WFK0	Clostridium_phage	94.8	1.0e-186
WP_003433579.1|1730140_1730758_+	YmfQ family protein	NA	A0A0A8WII4	Clostridium_phage	98.0	8.8e-114
WP_009888853.1|1730769_1731795_+|tail	phage tail protein	tail	A3QSB7	Clostridium_virus	87.8	9.1e-140
WP_009893144.1|1731811_1733338_+	hypothetical protein	NA	B6SBV0	Clostridium_virus	60.8	1.3e-89
WP_009889429.1|1733352_1733646_+	hypothetical protein	NA	E2ELK3	Clostridium_phage	77.9	2.2e-38
WP_009889431.1|1733645_1733828_+	hypothetical protein	NA	A3QSC3	Clostridium_virus	95.0	5.5e-24
WP_009889434.1|1733861_1734428_+	hypothetical protein	NA	A0A0A8WFF2	Clostridium_phage	77.8	3.6e-37
WP_009889435.1|1734458_1734749_+	hypothetical protein	NA	A0A0A8WIF5	Clostridium_phage	95.8	6.9e-45
WP_009889440.1|1734752_1735010_+|holin	holin	holin	A3QSC5	Clostridium_virus	100.0	1.1e-41
WP_003429958.1|1735270_1736134_+	Abi family protein	NA	A3QSC6	Clostridium_virus	99.7	8.4e-163
WP_009889444.1|1736212_1737025_+	N-acetylmuramoyl-L-alanine amidase	NA	X5JAJ5	Clostridium_phage	97.4	9.7e-153
WP_009893147.1|1737118_1739518_+	cell wall-binding repeat-containing protein	NA	NA	NA	NA	NA
WP_003433687.1|1739558_1739744_-	hypothetical protein	NA	A0A0A8WHQ4	Clostridium_phage	62.1	7.6e-13
>prophage 6
NZ_CP026599	Clostridioides difficile strain 09-00072 chromosome, complete genome	4119929	3845403	3859235	4119929	portal,transposase	Clostridioides_phage(83.33%)	17	NA	NA
WP_009888243.1|3845403_3846543_+	Fic family protein	NA	A0A1V0E025	Clostridioides_phage	91.8	4.9e-195
WP_009888245.1|3846875_3847451_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888246.1|3847461_3847650_+	hypothetical protein	NA	A0A1V0E014	Clostridioides_phage	96.8	5.3e-22
WP_009888247.1|3847844_3848402_+	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	97.8	4.1e-94
WP_012816430.1|3848701_3849445_+	hypothetical protein	NA	A0A1V0DZW7	Clostridioides_phage	92.3	4.3e-131
WP_021396478.1|3849640_3849859_+	hypothetical protein	NA	A0A1V0DZW7	Clostridioides_phage	94.4	6.8e-37
WP_012816431.1|3849898_3850441_+	hypothetical protein	NA	A0A1V0DZW7	Clostridioides_phage	95.0	8.3e-92
WP_009888248.1|3850535_3851741_+|portal	phage portal protein	portal	A0A1V0DZW8	Clostridioides_phage	95.0	2.0e-210
WP_009888251.1|3852269_3852713_-	hypothetical protein	NA	A0A1V0DZZ2	Clostridioides_phage	82.6	4.3e-62
WP_009888252.1|3852930_3853374_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888253.1|3853395_3853713_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012816432.1|3853902_3854565_-	DUF4367 domain-containing protein	NA	A0A1V0DZZ4	Clostridioides_phage	76.2	4.4e-87
WP_009888255.1|3854596_3855139_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1V0DZZ1	Clostridioides_phage	96.7	3.8e-89
WP_009888256.1|3855378_3855561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888257.1|3855588_3856200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012816433.1|3856676_3857891_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	7.9e-50
WP_003437815.1|3858077_3859235_-	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	28.5	8.4e-17
>prophage 7
NZ_CP026599	Clostridioides difficile strain 09-00072 chromosome, complete genome	4119929	4030960	4046383	4119929		Streptococcus_phage(92.31%)	20	NA	NA
WP_009892195.1|4030960_4031284_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	73.5	1.7e-39
WP_009892197.1|4031298_4031682_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	66.1	6.3e-38
WP_009892199.1|4031777_4032191_+	DUF3788 domain-containing protein	NA	NA	NA	NA	NA
WP_009892201.1|4032297_4032756_+	glyoxalase	NA	NA	NA	NA	NA
WP_009892206.1|4032780_4033323_+	DUF3795 domain-containing protein	NA	NA	NA	NA	NA
WP_009892207.1|4033379_4033886_+	YcxB family protein	NA	NA	NA	NA	NA
WP_012816450.1|4033995_4035390_+	cell division protein FtsK	NA	A0A1S5SFB5	Streptococcus_phage	66.8	1.3e-178
WP_009892210.1|4035669_4036791_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	62.7	1.3e-134
WP_009892216.1|4036797_4036932_+	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_006354966.1|4036932_4037154_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	86.3	1.2e-28
WP_009892220.1|4037473_4038112_+	chloramphenicol acetyltransferase CAT	NA	G3CFL0	Escherichia_phage	35.3	7.6e-36
WP_009892222.1|4038188_4038377_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009892224.1|4038397_4038895_+	conjugal transfer protein	NA	A0A1S5SF25	Streptococcus_phage	41.2	1.3e-27
WP_009892226.1|4038910_4039414_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	47.6	4.4e-39
WP_153300386.1|4039376_4039517_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009892227.1|4039526_4039916_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	73.8	8.1e-49
WP_009892228.1|4039902_4042335_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.0	0.0e+00
WP_009892229.1|4042334_4044470_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	58.6	1.3e-177
WP_009892230.1|4044466_4045474_+	C40 family peptidase	NA	A0A1S5SEZ8	Streptococcus_phage	67.3	6.4e-130
WP_009892232.1|4045489_4046383_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	53.0	1.6e-79
