assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002946935.1_ASM294693v1	NZ_CP026680	Pseudomonas aeruginosa strain F5677 chromosome, complete genome	1	57186-57305	1	CRISPRCasFinder	no		csa3,RT,DEDDh,cas3,DinG,WYL,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,TnsE_C	Orphan	ATAAAGGGGACAGATCTATTTTCCCTACTCTAATTTTCTAAGCA	44	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,DinG,WYL,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,TnsE_C	NA|134aa|up_2|NZ_CP026680.1_54895_55297_+,NA|133aa|up_0|NZ_CP026680.1_56717_57116_+,NA|110aa|down_2|NZ_CP026680.1_58449_58779_+,NA|171aa|down_5|NZ_CP026680.1_60457_60970_+,NA|69aa|down_6|NZ_CP026680.1_61193_61400_+	NA|296aa|up_9|NZ_CP026680.1_39201_40089_+	cd08482, PBP2_TrpI, The C-terminal substrate binding domain of LysR-type transcriptional regulator TrpI, which is involved in control of tryptophan synthesis, contains type 2 periplasmic binding fold	NA|72aa|up_8|NZ_CP026680.1_40189_40405_+	COG3360, COG3360, Uncharacterized conserved protein [Function unknown]	NA|76aa|up_7|NZ_CP026680.1_40588_40816_+	pfam06649, DUF1161, Protein of unknown function (DUF1161)	NA|563aa|up_6|NZ_CP026680.1_41112_42801_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|118aa|up_5|NZ_CP026680.1_53219_53573_+	pfam13108, DUF3969, Protein of unknown function (DUF3969)	NA|100aa|up_4|NZ_CP026680.1_54083_54383_+	pfam04591, DUF596, Protein of unknown function, DUF596	NA|84aa|up_3|NZ_CP026680.1_54647_54899_+	pfam14437, MafB19-deam, MafB19-like deaminase	NA|134aa|up_2|NZ_CP026680.1_54895_55297_+	NA	NA|343aa|up_1|NZ_CP026680.1_55390_56419_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|133aa|up_0|NZ_CP026680.1_56717_57116_+	NA	NA|231aa|down_0|NZ_CP026680.1_57343_58036_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|135aa|down_1|NZ_CP026680.1_58045_58450_+	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease	NA|110aa|down_2|NZ_CP026680.1_58449_58779_+	NA	NA|81aa|down_3|NZ_CP026680.1_59218_59461_+	pfam14206, Cys_rich_CPCC, Cysteine-rich CPCC	NA|231aa|down_4|NZ_CP026680.1_59642_60335_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|171aa|down_5|NZ_CP026680.1_60457_60970_+	NA	NA|69aa|down_6|NZ_CP026680.1_61193_61400_+	NA	NA|882aa|down_7|NZ_CP026680.1_61556_64202_+	pfam04830, DUF637, Possible hemagglutinin (DUF637)	NA|162aa|down_8|NZ_CP026680.1_64747_65233_+	sd00046, FHA_bHelix, beta-helical repeat found in filamentous hemagglutinin and related adhesins and CdiA family proteins	NA|231aa|down_9|NZ_CP026680.1_65274_65967_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_002946935.1_ASM294693v1	NZ_CP026680	Pseudomonas aeruginosa strain F5677 chromosome, complete genome	2	4332752-4333573	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,RT,DEDDh,cas3,DinG,WYL,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,TnsE_C	Type I-E	CGGTTCATCCCCACGCATGTGGGGAACAC,CGGTTCATCCCCACGCATGTGGGGAACAC,CGGTTCATCCCCACGCATGTGGGGAACAC	29,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	13,13,12	13	TypeI-E	csa3,RT,DEDDh,cas3,DinG,WYL,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,TnsE_C	NA|415aa|up_1|NZ_CP026680.1_4329993_4331238_-,NA	NA|527aa|up_9|NZ_CP026680.1_4318375_4319956_+	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase	NA|335aa|up_8|NZ_CP026680.1_4320059_4321064_-	COG2055, COG2055, Malate/L-lactate dehydrogenases [Energy production and conversion]	NA|542aa|up_7|NZ_CP026680.1_4321303_4322929_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|109aa|up_6|NZ_CP026680.1_4322941_4323268_-	pfam02974, Inh, Protease inhibitor Inh	NA|480aa|up_5|NZ_CP026680.1_4323583_4325023_-	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal	NA|482aa|up_4|NZ_CP026680.1_4325381_4326827_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|433aa|up_3|NZ_CP026680.1_4326830_4328129_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|594aa|up_2|NZ_CP026680.1_4328125_4329907_-	TIGR01842, Proteases_secretion_ATP-binding_protein_PrtD, type I secretion system ABC transporter, PrtD family	NA|415aa|up_1|NZ_CP026680.1_4329993_4331238_-	NA	NA|105aa|up_0|NZ_CP026680.1_4332278_4332593_+	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	cas2|100aa|down_0|NZ_CP026680.1_4333637_4333937_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas6e|204aa|down_1|NZ_CP026680.1_4334850_4335462_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|down_2|NZ_CP026680.1_4335436_4336099_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|381aa|down_3|NZ_CP026680.1_4336100_4337243_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|down_4|NZ_CP026680.1_4337252_4337783_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|523aa|down_5|NZ_CP026680.1_4337779_4339348_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|891aa|down_6|NZ_CP026680.1_4339350_4342023_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|859aa|down_7|NZ_CP026680.1_4343826_4346403_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|591aa|down_8|NZ_CP026680.1_4346425_4348198_-	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|483aa|down_9|NZ_CP026680.1_4348550_4349999_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]
GCF_002946935.1_ASM294693v1	NZ_CP026680	Pseudomonas aeruginosa strain F5677 chromosome, complete genome	3	4342743-4343566	2,3,2,3	CRT,CRISPRCasFinder,PILER-CR,PILER-CR	no	cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,RT,DEDDh,cas3,DinG,WYL,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,TnsE_C	Type I-E	NCGGTTCATCCCCACACCCGTGGGGAACAC,CGGTTCATCCCCACACCCGTGGGGAACAC,CAGCGGTTCATCCCCACACCCGTGGGGAACAC,CGGTTCATCCCCACACCCGTGGGGAACAC	30,29,32,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B:I-E,II-B	13,12,9,9	13	TypeI-E	csa3,RT,DEDDh,cas3,DinG,WYL,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,TnsE_C	NA|415aa|up_8|NZ_CP026680.1_4329993_4331238_-,NA	NA|594aa|up_9|NZ_CP026680.1_4328125_4329907_-	TIGR01842, Proteases_secretion_ATP-binding_protein_PrtD, type I secretion system ABC transporter, PrtD family	NA|415aa|up_8|NZ_CP026680.1_4329993_4331238_-	NA	NA|105aa|up_7|NZ_CP026680.1_4332278_4332593_+	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	cas2|100aa|up_6|NZ_CP026680.1_4333637_4333937_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas6e|204aa|up_5|NZ_CP026680.1_4334850_4335462_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|up_4|NZ_CP026680.1_4335436_4336099_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|381aa|up_3|NZ_CP026680.1_4336100_4337243_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|up_2|NZ_CP026680.1_4337252_4337783_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|523aa|up_1|NZ_CP026680.1_4337779_4339348_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|891aa|up_0|NZ_CP026680.1_4339350_4342023_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|859aa|down_0|NZ_CP026680.1_4343826_4346403_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|591aa|down_1|NZ_CP026680.1_4346425_4348198_-	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|483aa|down_2|NZ_CP026680.1_4348550_4349999_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|384aa|down_3|NZ_CP026680.1_4349995_4351147_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|504aa|down_4|NZ_CP026680.1_4351136_4352648_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|261aa|down_5|NZ_CP026680.1_4352650_4353433_-	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|168aa|down_6|NZ_CP026680.1_4353624_4354128_+	pfam14595, Thioredoxin_9, Thioredoxin	NA|86aa|down_7|NZ_CP026680.1_4354149_4354407_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|680aa|down_8|NZ_CP026680.1_4354403_4356443_-	pfam04632, FUSC, Fusaric acid resistance protein family	NA|303aa|down_9|NZ_CP026680.1_4356442_4357351_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]
GCF_002946935.1_ASM294693v1	NZ_CP026680	Pseudomonas aeruginosa strain F5677 chromosome, complete genome	4	5050053-5050141	4	CRISPRCasFinder	no	DEDDh	csa3,RT,DEDDh,cas3,DinG,WYL,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,TnsE_C	Unclear	GGCGTTATCCGCCCTACGGACCG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,DinG,WYL,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,TnsE_C	NA|128aa|up_3|NZ_CP026680.1_5046097_5046481_-,NA	NA|524aa|up_9|NZ_CP026680.1_5039964_5041536_+	pfam13559, DUF4129, Domain of unknown function (DUF4129)	NA|428aa|up_8|NZ_CP026680.1_5041532_5042816_+	pfam14258, DUF4350, Domain of unknown function (DUF4350)	NA|336aa|up_7|NZ_CP026680.1_5042812_5043820_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|444aa|up_6|NZ_CP026680.1_5043816_5045148_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|120aa|up_5|NZ_CP026680.1_5045152_5045512_-	TIGR02266, gmx_TIGR02266, Myxococcus xanthus paralogous domain TIGR02266	NA|141aa|up_4|NZ_CP026680.1_5045572_5045995_-	pfam13511, DUF4124, Domain of unknown function (DUF4124)	NA|128aa|up_3|NZ_CP026680.1_5046097_5046481_-	NA	NA|269aa|up_2|NZ_CP026680.1_5046574_5047381_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|305aa|up_1|NZ_CP026680.1_5047465_5048380_+	PRK11175, PRK11175, universal stress protein UspE; Provisional	NA|484aa|up_0|NZ_CP026680.1_5048462_5049914_+	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|258aa|down_0|NZ_CP026680.1_5050391_5051165_-	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional	NA|309aa|down_1|NZ_CP026680.1_5051229_5052156_-	PRK05713, PRK05713, iron-sulfur-binding ferredoxin reductase	NA|376aa|down_2|NZ_CP026680.1_5052148_5053276_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|508aa|down_3|NZ_CP026680.1_5053553_5055077_+	COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion]	NA|436aa|down_4|NZ_CP026680.1_5055173_5056481_-	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|103aa|down_5|NZ_CP026680.1_5056565_5056874_-	COG4321, COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis [General function prediction only]	NA|195aa|down_6|NZ_CP026680.1_5056894_5057479_-	cd03169, GATase1_PfpI_1, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus	NA|204aa|down_7|NZ_CP026680.1_5057582_5058194_-	pfam11008, DUF2846, Protein of unknown function (DUF2846)	NA|427aa|down_8|NZ_CP026680.1_5058287_5059568_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|360aa|down_9|NZ_CP026680.1_5059667_5060747_-	COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism]
