assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002947505.1_ASM294750v1	NZ_CP026715	Klebsiella oxytoca strain AR_0028 chromosome, complete genome	1	103127-103765	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,WYL,cas14j	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	9,9,10	10	TypeI-E	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,WYL,cas14j	NA,NA	NA|571aa|up_9|NZ_CP026715.1_91841_93554_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP026715.1_93652_94387_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|887aa|up_7|NZ_CP026715.1_94582_97243_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|up_6|NZ_CP026715.1_97254_98811_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|185aa|up_5|NZ_CP026715.1_98807_99362_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|353aa|up_4|NZ_CP026715.1_99373_100432_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP026715.1_100441_101188_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|215aa|up_2|NZ_CP026715.1_101169_101814_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|NZ_CP026715.1_101816_102737_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP026715.1_102736_103030_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|352aa|down_0|NZ_CP026715.1_104058_105114_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|472aa|down_1|NZ_CP026715.1_105351_106767_+	PRK10637, cysG, siroheme synthase CysG	NA|303aa|down_2|NZ_CP026715.1_106776_107685_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_3|NZ_CP026715.1_107694_109122_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_4|NZ_CP026715.1_109121_109727_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|109aa|down_5|NZ_CP026715.1_109780_110107_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|106aa|down_6|NZ_CP026715.1_110247_110565_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_7|NZ_CP026715.1_110584_111295_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_8|NZ_CP026715.1_111294_111774_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_9|NZ_CP026715.1_111770_112820_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed
GCF_002947505.1_ASM294750v1	NZ_CP026715	Klebsiella oxytoca strain AR_0028 chromosome, complete genome	2	2890878-2891014	2	CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,WYL,cas14j	Orphan	ATTCGGCTTGAGAGCCGTTTCCA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,WYL,cas14j	NA|70aa|up_5|NZ_CP026715.1_2888205_2888415_-,NA|68aa|up_4|NZ_CP026715.1_2888411_2888615_-,NA|154aa|up_3|NZ_CP026715.1_2888608_2889070_-,NA|71aa|up_1|NZ_CP026715.1_2889844_2890057_-,NA|108aa|down_3|NZ_CP026715.1_2893429_2893753_+,NA|150aa|down_4|NZ_CP026715.1_2893723_2894173_-,NA|78aa|down_6|NZ_CP026715.1_2894849_2895083_+,NA|75aa|down_7|NZ_CP026715.1_2895125_2895350_+	NA|193aa|up_9|NZ_CP026715.1_2885483_2886062_-	pfam06576, DUF1133, Protein of unknown function (DUF1133)	NA|215aa|up_8|NZ_CP026715.1_2886058_2886703_-	COG4725, IME4, Transcriptional activator, adenine-specific DNA methyltransferase [Signal transduction mechanisms / Transcription]	NA|361aa|up_7|NZ_CP026715.1_2886699_2887782_-	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|138aa|up_6|NZ_CP026715.1_2887795_2888209_-	pfam13935, Ead_Ea22, Ead/Ea22-like protein	NA|70aa|up_5|NZ_CP026715.1_2888205_2888415_-	NA	NA|68aa|up_4|NZ_CP026715.1_2888411_2888615_-	NA	NA|154aa|up_3|NZ_CP026715.1_2888608_2889070_-	NA	NA|262aa|up_2|NZ_CP026715.1_2889066_2889852_-	TIGR03734, PRTRC_parB, PRTRC system ParB family protein	NA|71aa|up_1|NZ_CP026715.1_2889844_2890057_-	NA	NA|98aa|up_0|NZ_CP026715.1_2890053_2890347_-	COG3355, COG3355, Predicted transcriptional regulator [Transcription]	NA|138aa|down_0|NZ_CP026715.1_2891701_2892115_-	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT	NA|71aa|down_1|NZ_CP026715.1_2892173_2892386_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|199aa|down_2|NZ_CP026715.1_2892494_2893091_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|108aa|down_3|NZ_CP026715.1_2893429_2893753_+	NA	NA|150aa|down_4|NZ_CP026715.1_2893723_2894173_-	NA	NA|98aa|down_5|NZ_CP026715.1_2894490_2894784_+	pfam06301, Lambda_Kil, Bacteriophage lambda Kil protein	NA|78aa|down_6|NZ_CP026715.1_2894849_2895083_+	NA	NA|75aa|down_7|NZ_CP026715.1_2895125_2895350_+	NA	NA|232aa|down_8|NZ_CP026715.1_2895346_2896042_+	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb	NA|235aa|down_9|NZ_CP026715.1_2896038_2896743_+	pfam06213, CobT, Cobalamin biosynthesis protein CobT
GCF_002947505.1_ASM294750v1	NZ_CP026715	Klebsiella oxytoca strain AR_0028 chromosome, complete genome	3	3549659-3549766	3	CRISPRCasFinder	no	WYL	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,WYL,cas14j	Unclear	ATACACAAAATCATTCACGCTGCGTCGAGGCGG	33	1	1	3549692-3549733	NZ_CP026715.1_3549815-3549856	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,WYL,cas14j	NA,NA	NA|616aa|up_9|NZ_CP026715.1_3536950_3538798_-	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|111aa|up_8|NZ_CP026715.1_3538825_3539158_-	PRK05585, yajC, preprotein translocase subunit YajC; Validated	NA|376aa|up_7|NZ_CP026715.1_3539180_3540308_-	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional	NA|355aa|up_6|NZ_CP026715.1_3540417_3541482_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_5|NZ_CP026715.1_3541573_3542155_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|201aa|up_4|NZ_CP026715.1_3542325_3542928_+	PRK15000, PRK15000, peroxiredoxin C	NA|465aa|up_3|NZ_CP026715.1_3542975_3544370_-	pfam13163, DUF3999, Protein of unknown function (DUF3999)	NA|886aa|up_2|NZ_CP026715.1_3544366_3547024_-	pfam10101, DUF2339, Predicted membrane protein (DUF2339)	NA|623aa|up_1|NZ_CP026715.1_3547160_3549029_-	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]	NA|182aa|up_0|NZ_CP026715.1_3549053_3549599_-	COG3224, COG3224, Uncharacterized protein conserved in bacteria [Function unknown]	NA|214aa|down_0|NZ_CP026715.1_3550227_3550869_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|301aa|down_1|NZ_CP026715.1_3551160_3552063_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|607aa|down_2|NZ_CP026715.1_3552059_3553880_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|457aa|down_3|NZ_CP026715.1_3554030_3555401_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|down_4|NZ_CP026715.1_3555524_3556844_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|430aa|down_5|NZ_CP026715.1_3557262_3558552_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|down_6|NZ_CP026715.1_3558573_3559263_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|down_7|NZ_CP026715.1_3559541_3560744_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1045aa|down_8|NZ_CP026715.1_3560740_3563875_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|121aa|down_9|NZ_CP026715.1_3564164_3564527_+	pfam14359, DUF4406, Domain of unknown function (DUF4406)
GCF_002947505.1_ASM294750v1	NZ_CP026715	Klebsiella oxytoca strain AR_0028 chromosome, complete genome	4	4944565-4944655	4	CRISPRCasFinder	no		cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,WYL,cas14j	Orphan	TCCGGGCTACCCGAACGCAGGCGG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,WYL,cas14j	NA,NA	NA|294aa|up_9|NZ_CP026715.1_4932606_4933488_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|103aa|up_8|NZ_CP026715.1_4933659_4933968_-	pfam01845, CcdB, CcdB protein	NA|79aa|up_7|NZ_CP026715.1_4933970_4934207_-	pfam07362, CcdA, Post-segregation antitoxin CcdA	NA|478aa|up_6|NZ_CP026715.1_4934312_4935746_-	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed	NA|301aa|up_5|NZ_CP026715.1_4935770_4936673_-	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|389aa|up_4|NZ_CP026715.1_4936833_4938000_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|455aa|up_3|NZ_CP026715.1_4938050_4939415_-	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein	NA|1036aa|up_2|NZ_CP026715.1_4939418_4942526_-	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|375aa|up_1|NZ_CP026715.1_4942525_4943650_-	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA	NA|139aa|up_0|NZ_CP026715.1_4944103_4944520_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|216aa|down_0|NZ_CP026715.1_4944721_4945369_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|499aa|down_1|NZ_CP026715.1_4945449_4946946_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|305aa|down_2|NZ_CP026715.1_4946942_4947857_-	cd08471, PBP2_CrgA_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|207aa|down_3|NZ_CP026715.1_4947959_4948580_+	COG3576, COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase [General function prediction only]	NA|157aa|down_4|NZ_CP026715.1_4948710_4949181_+	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|270aa|down_5|NZ_CP026715.1_4949436_4950246_+	PRK09861, PRK09861, lipoprotein NlpA	NA|287aa|down_6|NZ_CP026715.1_4950270_4951131_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|185aa|down_7|NZ_CP026715.1_4951122_4951677_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|260aa|down_8|NZ_CP026715.1_4951846_4952626_+	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|318aa|down_9|NZ_CP026715.1_4952640_4953594_+	PRK09393, ftrA, transcriptional activator FtrA; Provisional
