The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016610	Xylella fastidiosa strain Salento-2 chromosome, complete genome	2508296	767289	779472	2508296	integrase,tRNA	Xylella_phage(33.33%)	12	761672:761686	784656:784670
761672:761686	attL	CGTGCTGTACTACGG	NA	NA	NA	NA
WP_046420592.1|767289_768702_-	DEAD/DEAH box helicase	NA	C8CLF7	Xylella_phage	94.9	2.5e-225
WP_060870121.1|768698_769376_-	KilA-N domain-containing protein	NA	A0A1W6JP13	Morganella_phage	41.1	6.2e-12
WP_046420589.1|769478_769784_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046420587.1|769785_770064_-	VRR-NUC domain-containing protein	NA	C8CLF9	Xylella_phage	96.7	1.1e-44
WP_060871515.1|771653_771968_+	hypothetical protein	NA	C8CLF7	Xylella_phage	95.9	5.6e-32
WP_046420585.1|771964_772261_+	DUF4224 domain-containing protein	NA	A0A2H4JF29	uncultured_Caudovirales_phage	48.1	4.5e-07
WP_046420583.1|772272_773334_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	52.7	1.4e-95
WP_046420580.1|773591_774287_-	energy transducer TonB	NA	NA	NA	NA	NA
WP_010894734.1|774408_775689_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.2	6.5e-95
WP_046420578.1|776494_777448_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010894730.1|777745_778540_+	ParA family protein	NA	A0A0K2FLP4	Brevibacillus_phage	29.7	8.0e-19
WP_046420575.1|778539_779472_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	36.6	6.3e-15
784656:784670	attR	CCGTAGTACAGCACG	NA	NA	NA	NA
>prophage 2
NZ_CP016610	Xylella fastidiosa strain Salento-2 chromosome, complete genome	2508296	1138450	1151605	2508296	coat	Stenotrophomonas_phage(62.5%)	20	NA	NA
WP_046419278.1|1138450_1139626_+	replication initiation factor	NA	S0F3F7	Stenotrophomonas_phage	45.5	2.5e-77
WP_046419276.1|1139671_1139986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419274.1|1140109_1140361_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011097859.1|1140380_1140509_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104993177.1|1140642_1141932_+	hypothetical protein	NA	Q94MX3	Xanthomonas_phage	48.3	9.1e-20
WP_085808098.1|1141944_1142274_+|coat	phage coat protein	coat	NA	NA	NA	NA
WP_085808099.1|1142273_1143608_+	Zonular occludens toxin	NA	Q4LAU4	Stenotrophomonas_phage	49.3	7.2e-113
WP_057683733.1|1143747_1144026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060871500.1|1144088_1144436_-	hypothetical protein	NA	Q38057	Xanthomonas_phage	32.4	3.4e-06
WP_060870210.1|1144585_1144999_-	DUF3693 domain-containing protein	NA	S0F314	Stenotrophomonas_phage	38.5	3.7e-15
WP_046420105.1|1145140_1145476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081089932.1|1145477_1145735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419283.1|1145738_1145921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419278.1|1146446_1147622_+	replication initiation factor	NA	S0F3F7	Stenotrophomonas_phage	45.5	2.5e-77
WP_046419276.1|1147667_1147982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419274.1|1148106_1148358_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011097859.1|1148377_1148506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104993177.1|1148639_1149929_+	hypothetical protein	NA	Q94MX3	Xanthomonas_phage	48.3	9.1e-20
WP_085808098.1|1149941_1150271_+|coat	phage coat protein	coat	NA	NA	NA	NA
WP_085808105.1|1150270_1151605_+	Zonular occludens toxin	NA	Q4LAU4	Stenotrophomonas_phage	49.3	5.5e-113
>prophage 3
NZ_CP016610	Xylella fastidiosa strain Salento-2 chromosome, complete genome	2508296	1186471	1207244	2508296		Xylella_phage(100.0%)	20	NA	NA
WP_046419225.1|1186471_1187974_-	hypothetical protein	NA	C8CLJ8	Xylella_phage	86.7	6.7e-224
WP_046419223.1|1187970_1188753_-	hypothetical protein	NA	C8CLJ7	Xylella_phage	88.5	7.4e-126
WP_060872308.1|1188788_1189187_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419799.1|1189183_1190488_-	hypothetical protein	NA	C8CLJ3	Xylella_phage	83.4	2.6e-184
WP_046419220.1|1192182_1192890_-	hypothetical protein	NA	C8CLJ1	Xylella_phage	70.6	1.2e-77
WP_046419219.1|1192920_1193166_-	hypothetical protein	NA	C8CLJ0	Xylella_phage	97.2	1.6e-34
WP_046419217.1|1193135_1195064_-	hypothetical protein	NA	C8CLI9	Xylella_phage	95.2	0.0e+00
WP_046419214.1|1195060_1195468_-	hypothetical protein	NA	C8CLI8	Xylella_phage	98.5	1.3e-68
WP_046419213.1|1195488_1196715_-	hypothetical protein	NA	C8CLI7	Xylella_phage	92.9	1.6e-215
WP_046419211.1|1196763_1197618_-	hypothetical protein	NA	C8CLI6	Xylella_phage	78.5	8.4e-107
WP_046419208.1|1197619_1199692_-	hypothetical protein	NA	C8CLI5	Xylella_phage	97.5	0.0e+00
WP_080939574.1|1199694_1201110_-	DNA packaging protein	NA	C8CLI4	Xylella_phage	98.9	2.8e-280
WP_046419203.1|1201018_1201345_-	hypothetical protein	NA	C8CLI3	Xylella_phage	96.3	1.7e-52
WP_046419200.1|1201344_1201659_-	hypothetical protein	NA	C8CLI2	Xylella_phage	95.2	2.0e-50
WP_046419794.1|1201658_1202201_-	hypothetical protein	NA	C8CLI0	Xylella_phage	87.8	2.4e-75
WP_053014138.1|1202197_1202695_-	lysozyme	NA	C8CLH9	Xylella_phage	94.4	4.3e-87
WP_046419792.1|1202675_1202900_-	hypothetical protein	NA	C8CLH8	Xylella_phage	97.3	5.5e-34
WP_046419197.1|1203022_1203745_-	hypothetical protein	NA	C8CLH7	Xylella_phage	91.7	1.3e-116
WP_046419194.1|1204015_1206544_-	DNA primase	NA	C8CLH6	Xylella_phage	75.8	0.0e+00
WP_046419191.1|1206680_1207244_-	hypothetical protein	NA	C8CLH5	Xylella_phage	69.7	2.3e-68
>prophage 4
NZ_CP016610	Xylella fastidiosa strain Salento-2 chromosome, complete genome	2508296	1211053	1222432	2508296	integrase	Xylella_phage(100.0%)	15	1208760:1208773	1225049:1225062
1208760:1208773	attL	ACAACAGCATTCTG	NA	NA	NA	NA
WP_046419172.1|1211053_1211569_+	hypothetical protein	NA	C8CLG9	Xylella_phage	36.6	2.9e-09
WP_046419169.1|1211565_1211961_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419166.1|1211957_1212425_+	DUF1566 domain-containing protein	NA	NA	NA	NA	NA
WP_004088054.1|1212421_1212823_+	hypothetical protein	NA	C8CLG7	Xylella_phage	97.7	3.6e-68
WP_046419163.1|1212819_1213014_+	hypothetical protein	NA	C8CLG6	Xylella_phage	89.1	1.4e-25
WP_046419160.1|1213045_1213240_+	hypothetical protein	NA	C8CLG5	Xylella_phage	71.4	4.5e-16
WP_046419156.1|1213728_1215006_+	DUF2800 domain-containing protein	NA	C8CLG3	Xylella_phage	87.7	3.1e-214
WP_020851622.1|1215005_1215572_+	DUF2815 family protein	NA	C8CLG2	Xylella_phage	98.4	5.8e-104
WP_080939573.1|1215639_1216794_+	hypothetical protein	NA	C8CLG1	Xylella_phage	89.7	7.7e-196
WP_085808107.1|1216795_1218946_+	DNA polymerase	NA	C8CLG0	Xylella_phage	92.3	0.0e+00
WP_046420587.1|1218942_1219221_+	VRR-NUC domain-containing protein	NA	C8CLF9	Xylella_phage	96.7	1.1e-44
WP_046420063.1|1219222_1219669_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046420062.1|1219753_1221172_+	DEAD/DEAH box helicase	NA	C8CLF7	Xylella_phage	98.1	1.5e-273
WP_080939599.1|1221168_1221423_+	DUF4224 domain-containing protein	NA	C8CLF5	Xylella_phage	91.2	5.7e-35
WP_046420060.1|1221412_1222432_+|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	97.1	5.2e-188
1225049:1225062	attR	CAGAATGCTGTTGT	NA	NA	NA	NA
>prophage 5
NZ_CP016610	Xylella fastidiosa strain Salento-2 chromosome, complete genome	2508296	1290122	1299209	2508296	tail,plate	Salmonella_phage(27.27%)	12	NA	NA
WP_046419977.1|1290122_1290455_-	DNA-binding transcriptional regulator	NA	A0A0P0IRJ4	Acinetobacter_phage	40.7	1.6e-16
WP_046419976.1|1290729_1292721_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_046420067.1|1292973_1293543_+	SocA family protein	NA	I6R0L8	Salmonella_phage	40.7	1.3e-18
WP_046419974.1|1293542_1293770_+	hypothetical protein	NA	C8CLJ6	Xylella_phage	66.1	2.0e-15
WP_046419971.1|1293770_1294934_-|tail	tail fiber protein	tail	H9C1B7	Pectobacterium_phage	38.5	9.0e-19
WP_046419969.1|1294937_1295498_-	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	26.8	8.5e-07
WP_046419967.1|1295494_1296640_-|plate	baseplate J/gp47 family protein	plate	D0UIH5	Aggregatibacter_phage	49.0	5.3e-96
WP_004085590.1|1296742_1297039_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	54.7	9.0e-24
WP_004085592.1|1297041_1297335_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	37.9	6.2e-09
WP_046419963.1|1297390_1297744_-	hypothetical protein	NA	Q7Y5S5	Haemophilus_phage	51.0	4.1e-23
WP_046419962.1|1297740_1298382_-	hypothetical protein	NA	A0A0M5M1K7	Salmonella_phage	37.3	2.5e-31
WP_046419672.1|1298378_1299209_-	hypothetical protein	NA	D0UIH8	Aggregatibacter_phage	51.8	6.8e-77
>prophage 6
NZ_CP016610	Xylella fastidiosa strain Salento-2 chromosome, complete genome	2508296	1303717	1323984	2508296	head,terminase	Haemophilus_phage(25.0%)	29	NA	NA
WP_004087249.1|1303717_1304155_-	DUF3277 family protein	NA	Q7Y5T4	Haemophilus_phage	63.1	3.6e-45
WP_046419658.1|1304164_1305661_-	DUF3383 domain-containing protein	NA	Q7Y5T5	Haemophilus_phage	47.8	1.9e-122
WP_080939589.1|1305661_1306132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419655.1|1306118_1306487_-	hypothetical protein	NA	Q776V7	Haemophilus_phage	42.9	2.8e-19
WP_046419654.1|1306473_1306953_-	hypothetical protein	NA	M4SN98	Psychrobacter_phage	28.0	8.6e-08
WP_046419652.1|1306949_1307318_-	DUF4054 domain-containing protein	NA	Q7Y5T9	Haemophilus_phage	38.1	1.7e-11
WP_046419651.1|1307317_1307671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419650.1|1307736_1308720_-	DUF2184 domain-containing protein	NA	A0A2R3UA82	Siphoviridae_environmental_samples	39.0	1.1e-49
WP_046419648.1|1308729_1309212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419647.1|1309239_1310430_-	DUF2213 domain-containing protein	NA	H9C194	Pectobacterium_phage	41.7	2.1e-39
WP_046419646.1|1310429_1311275_-|head	phage head morphogenesis protein	head	Q7Y5U5	Haemophilus_phage	32.3	1.6e-28
WP_046419644.1|1311347_1311686_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_046419643.1|1311682_1311964_+	XRE family transcriptional regulator	NA	A0A2D1GR59	Pseudomonas_phage	45.2	5.2e-13
WP_080939596.1|1312012_1313317_-	DUF1073 domain-containing protein	NA	H9C106	Vibrio_phage	37.1	2.6e-67
WP_046419640.1|1313397_1314948_-|terminase	phage terminase large subunit	terminase	H9C0C7	Vibrio_phage	44.7	5.4e-112
WP_046419638.1|1314898_1315297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046420065.1|1315388_1315619_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419636.1|1315602_1316064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419634.1|1316053_1316383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023907472.1|1316375_1316873_-	lysozyme	NA	A0A2I7RLY1	Vibrio_phage	53.1	2.3e-27
WP_004085696.1|1317077_1317416_-	BrnA antitoxin family protein	NA	K4NZP3	Burkholderia_phage	54.9	1.0e-07
WP_010894061.1|1317402_1317669_-	hypothetical protein	NA	K4NX81	Burkholderia_phage	40.7	8.1e-08
WP_046419632.1|1317856_1318555_-	hypothetical protein	NA	C8CLH7	Xylella_phage	81.7	4.3e-101
WP_046419893.1|1318683_1319094_-	hypothetical protein	NA	A0A088F6Y8	Sulfitobacter_phage	42.1	3.2e-11
WP_046419785.1|1319099_1320560_-	replicative DNA helicase	NA	O80281	Escherichia_phage	39.7	5.7e-71
WP_046419782.1|1320962_1321424_-	hypothetical protein	NA	A0A0F7LAQ7	uncultured_marine_virus	36.9	8.2e-08
WP_046419776.1|1321796_1322075_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053014142.1|1322053_1323166_-	hypothetical protein	NA	C8CLG1	Xylella_phage	59.5	3.3e-111
WP_046419774.1|1323198_1323984_-	hypothetical protein	NA	C8CLH5	Xylella_phage	55.9	2.1e-27
>prophage 7
NZ_CP016610	Xylella fastidiosa strain Salento-2 chromosome, complete genome	2508296	1329505	1337823	2508296	integrase	Xylella_phage(45.45%)	13	1330045:1330057	1338425:1338437
WP_046419752.1|1329505_1329895_+	hypothetical protein	NA	C8CLG8	Xylella_phage	78.6	1.7e-17
WP_046419749.1|1329894_1330311_+	hypothetical protein	NA	C8CLG7	Xylella_phage	73.9	3.0e-49
1330045:1330057	attL	GCCGGTACGTTGT	NA	NA	NA	NA
WP_046419748.1|1330307_1330499_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080939592.1|1330542_1330818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046419746.1|1330840_1331032_+	hypothetical protein	NA	C8CLG6	Xylella_phage	78.1	2.8e-18
WP_046419745.1|1331052_1331397_+	hypothetical protein	NA	U5P4J6	Shigella_phage	45.5	3.0e-15
WP_046419741.1|1331436_1332258_+	YfdQ family protein	NA	K7ZMK3	Xanthomonas_citri_phage	43.3	5.2e-53
WP_046419739.1|1332273_1333191_+	phage recombination protein Bet	NA	U6C6J0	Ralstonia_phage	48.7	4.6e-58
WP_046419737.1|1333187_1334822_+	hypothetical protein	NA	U6C712	Ralstonia_phage	38.2	6.8e-97
WP_046419912.1|1335193_1336024_+	hypothetical protein	NA	Q3LZN7	Bacteriophage	46.7	1.8e-21
WP_046419733.1|1336090_1336537_+	single-stranded DNA-binding protein	NA	L7TJL2	Pseudomonas_virus	52.9	1.1e-33
WP_060870176.1|1336555_1336804_+	DUF4224 domain-containing protein	NA	C8CLF5	Xylella_phage	81.7	8.0e-34
WP_046419731.1|1336803_1337823_+|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	87.9	5.4e-169
1338425:1338437	attR	ACAACGTACCGGC	NA	NA	NA	NA
>prophage 8
NZ_CP016610	Xylella fastidiosa strain Salento-2 chromosome, complete genome	2508296	1383365	1393944	2508296	tail,plate	Haemophilus_phage(23.08%)	17	NA	NA
WP_004085592.1|1383365_1383659_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	37.9	6.2e-09
WP_046419676.1|1383714_1384068_-	hypothetical protein	NA	Q7Y5S5	Haemophilus_phage	47.0	9.1e-23
WP_060870179.1|1384982_1385999_+	peptidase M4 family protein	NA	NA	NA	NA	NA
WP_081089730.1|1386006_1386360_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060871504.1|1386383_1386656_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_081089935.1|1386627_1387194_+	SocA family protein	NA	I6R0L8	Salmonella_phage	33.1	1.4e-17
WP_046419974.1|1387193_1387421_+	hypothetical protein	NA	C8CLJ6	Xylella_phage	66.1	2.0e-15
WP_046419971.1|1387421_1388585_-|tail	tail fiber protein	tail	H9C1B7	Pectobacterium_phage	38.5	9.0e-19
WP_046419969.1|1388588_1389149_-	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	26.8	8.5e-07
WP_046419967.1|1389145_1390291_-|plate	baseplate J/gp47 family protein	plate	D0UIH5	Aggregatibacter_phage	49.0	5.3e-96
WP_004085590.1|1390393_1390690_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	54.7	9.0e-24
WP_004085592.1|1390692_1390986_+	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	37.9	6.2e-09
WP_046419963.1|1391041_1391395_-	hypothetical protein	NA	Q7Y5S5	Haemophilus_phage	51.0	4.1e-23
WP_046419962.1|1391391_1392033_-	hypothetical protein	NA	A0A0M5M1K7	Salmonella_phage	37.3	2.5e-31
WP_046419672.1|1392029_1392860_-	hypothetical protein	NA	D0UIH8	Aggregatibacter_phage	51.8	6.8e-77
WP_046419669.1|1392856_1393174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419667.1|1393173_1393944_-	hypothetical protein	NA	Q7Y5T0	Haemophilus_phage	34.1	1.4e-28
>prophage 9
NZ_CP016610	Xylella fastidiosa strain Salento-2 chromosome, complete genome	2508296	1404061	1416148	2508296	integrase,head,terminase	Vibrio_phage(27.27%)	17	1414405:1414418	1418839:1418852
WP_046419646.1|1404061_1404907_-|head	phage head morphogenesis protein	head	Q7Y5U5	Haemophilus_phage	32.3	1.6e-28
WP_046419644.1|1404979_1405318_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_046419643.1|1405314_1405596_+	XRE family transcriptional regulator	NA	A0A2D1GR59	Pseudomonas_phage	45.2	5.2e-13
WP_080939596.1|1405644_1406949_-	DUF1073 domain-containing protein	NA	H9C106	Vibrio_phage	37.1	2.6e-67
WP_046419640.1|1407029_1408580_-|terminase	phage terminase large subunit	terminase	H9C0C7	Vibrio_phage	44.7	5.4e-112
WP_046419638.1|1408530_1408929_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046420065.1|1409020_1409251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419636.1|1409234_1409696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046419634.1|1409685_1410015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023907472.1|1410007_1410505_-	lysozyme	NA	A0A2I7RLY1	Vibrio_phage	53.1	2.3e-27
WP_004085696.1|1410709_1411048_-	BrnA antitoxin family protein	NA	K4NZP3	Burkholderia_phage	54.9	1.0e-07
WP_010894061.1|1411034_1411301_-	hypothetical protein	NA	K4NX81	Burkholderia_phage	40.7	8.1e-08
WP_046419893.1|1412314_1412725_-	hypothetical protein	NA	A0A088F6Y8	Sulfitobacter_phage	42.1	3.2e-11
WP_046419631.1|1412772_1413462_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104993183.1|1413442_1414435_-	DUF1376 domain-containing protein	NA	A0A0P0I481	Acinetobacter_phage	44.3	2.9e-18
1414405:1414418	attL	AATCGCCAATGTGG	NA	NA	NA	NA
WP_080939588.1|1414808_1415129_+	DUF4224 domain-containing protein	NA	C8CLF5	Xylella_phage	80.3	1.4e-27
WP_046419629.1|1415128_1416148_+|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	90.3	1.2e-173
1418839:1418852	attR	AATCGCCAATGTGG	NA	NA	NA	NA
