assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002996665.1_ASM299666v1	NZ_CP027255	Escherichia coli strain EC11 chromosome, complete genome	1	630477-630705	1,1,1	CRT,CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG	Type I-E	CCGGTTTATCCCCGCTGGCGCGGGGAACAC,GCCGGTTTATCCCCGCTGGCGCGGGGAACAC,GCCGGTTTATCCCCGCTGGCGCGGGGAACACACTAAGCATACAGAAC	30,31,47	0	0	NA	NA	I-E:I-E:I-E	3,2,2	3	TypeI-E	cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG	NA,NA	NA|254aa|up_9|NZ_CP027255.1_622351_623113_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP027255.1_623093_624143_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP027255.1_624139_624619_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP027255.1_624618_625329_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP027255.1_625347_625659_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP027255.1_625852_626176_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP027255.1_626225_626831_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP027255.1_626830_628258_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP027255.1_628259_629168_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP027255.1_629419_630457_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP027255.1_630785_631079_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP027255.1_631078_631999_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP027255.1_631995_632646_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP027255.1_632627_633374_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP027255.1_633384_634440_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|180aa|down_5|NZ_CP027255.1_634451_634991_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|down_6|NZ_CP027255.1_634987_636550_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP027255.1_636647_639347_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_8|NZ_CP027255.1_639540_639693_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_9|NZ_CP027255.1_639957_640692_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_002996665.1_ASM299666v1	NZ_CP027255	Escherichia coli strain EC11 chromosome, complete genome	2	646191-647561	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	22,22,21	22	TypeI-E	cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG	NA,NA|121aa|down_3|NZ_CP027255.1_650301_650664_+	cas7|352aa|up_9|NZ_CP027255.1_633384_634440_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|180aa|up_8|NZ_CP027255.1_634451_634991_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|up_7|NZ_CP027255.1_634987_636550_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|up_6|NZ_CP027255.1_636647_639347_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|up_5|NZ_CP027255.1_639540_639693_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|up_4|NZ_CP027255.1_639957_640692_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|up_3|NZ_CP027255.1_640765_642478_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|up_2|NZ_CP027255.1_642477_644277_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|122aa|up_1|NZ_CP027255.1_644592_644958_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|185aa|up_0|NZ_CP027255.1_644997_645552_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP027255.1_647900_648572_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|201aa|down_1|NZ_CP027255.1_648744_649347_+	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|302aa|down_2|NZ_CP027255.1_649360_650266_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|121aa|down_3|NZ_CP027255.1_650301_650664_+	NA	NA|433aa|down_4|NZ_CP027255.1_650719_652018_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_5|NZ_CP027255.1_652105_653743_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_6|NZ_CP027255.1_653970_654762_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_7|NZ_CP027255.1_654832_655168_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_8|NZ_CP027255.1_655167_655416_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_9|NZ_CP027255.1_655493_657728_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional
GCF_002996665.1_ASM299666v1	NZ_CP027255	Escherichia coli strain EC11 chromosome, complete genome	3	4273180-4273303	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,c2c9_V-U4,DinG	NA,NA|30aa|down_7|NZ_CP027255.1_4282199_4282289_+	NA|471aa|up_9|NZ_CP027255.1_4262633_4264046_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP027255.1_4264602_4264812_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP027255.1_4265267_4265894_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP027255.1_4265914_4268017_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP027255.1_4268020_4268668_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP027255.1_4268731_4269400_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP027255.1_4269396_4270182_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP027255.1_4270185_4270998_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP027255.1_4271009_4272614_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP027255.1_4272739_4273045_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP027255.1_4273617_4274874_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP027255.1_4274914_4276288_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP027255.1_4276502_4277144_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP027255.1_4277183_4278332_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP027255.1_4278622_4279834_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP027255.1_4279946_4280879_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP027255.1_4280875_4281901_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP027255.1_4282199_4282289_+	NA	NA|390aa|down_8|NZ_CP027255.1_4282454_4283624_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP027255.1_4283769_4284351_-	PRK10543, PRK10543, superoxide dismutase [Fe]
