assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003003515.1_ASM300351v1	NZ_CP021256	Legionella pneumophila strain D-4954 chromosome, complete genome	1	177103-178910	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,cas4	cas9,cas1,cas2,cas4,cas3,DEDDh,DinG,WYL,csa3	Type II-A,Type II-B,Type II-C	CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC,CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC,CAATAATCCCTCATCTAAAAATCCAACCACTGAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	20,25,25	25	TypeII-A,TypeII-B,TypeII-C	cas9,cas1,cas2,cas4,cas3,DEDDh,DinG,WYL,csa3	NA|446aa|up_6|NZ_CP021256.1_165858_167196_+,NA|213aa|up_4|NZ_CP021256.1_170102_170741_+,NA|290aa|down_2|NZ_CP021256.1_180526_181396_+,NA|121aa|down_3|NZ_CP021256.1_181361_181724_+,NA|49aa|down_9|NZ_CP021256.1_185718_185865_+	NA|475aa|up_9|NZ_CP021256.1_159909_161334_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|397aa|up_8|NZ_CP021256.1_161317_162508_-	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|331aa|up_7|NZ_CP021256.1_162518_163511_-	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|446aa|up_6|NZ_CP021256.1_165858_167196_+	NA	NA|672aa|up_5|NZ_CP021256.1_167292_169308_+	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP)	NA|213aa|up_4|NZ_CP021256.1_170102_170741_+	NA	cas9|1373aa|up_3|NZ_CP021256.1_170899_175018_+	cd09704, Csx12, CRISPR/Cas system-associated protein Cas9	cas1|331aa|up_2|NZ_CP021256.1_175014_176007_+	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas2|100aa|up_1|NZ_CP021256.1_176013_176313_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas4|198aa|up_0|NZ_CP021256.1_176293_176887_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	NA|114aa|down_0|NZ_CP021256.1_179357_179699_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|228aa|down_1|NZ_CP021256.1_179688_180372_-	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell	NA|290aa|down_2|NZ_CP021256.1_180526_181396_+	NA	NA|121aa|down_3|NZ_CP021256.1_181361_181724_+	NA	NA|68aa|down_4|NZ_CP021256.1_181736_181940_+	pfam02599, CsrA, Global regulator protein family	NA|95aa|down_5|NZ_CP021256.1_181954_182239_+	pfam04956, TrbC, TrbC/VIRB2 family	NA|94aa|down_6|NZ_CP021256.1_182248_182530_+	pfam05101, VirB3, Type IV secretory pathway, VirB3-like protein	NA|827aa|down_7|NZ_CP021256.1_182516_184997_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|237aa|down_8|NZ_CP021256.1_184993_185704_+	cd14262, VirB5_like, VirB5 protein family	NA|49aa|down_9|NZ_CP021256.1_185718_185865_+	NA
GCF_003003515.1_ASM300351v1	NZ_CP021256	Legionella pneumophila strain D-4954 chromosome, complete genome	2	1680337-1680444	2	CRISPRCasFinder	no		cas9,cas1,cas2,cas4,cas3,DEDDh,DinG,WYL,csa3	Orphan	ATCTTACAGGCAATTTGGGTATCACCTCTCAATCAG	36	0	0	NA	NA	NA	1	1	Orphan	cas9,cas1,cas2,cas4,cas3,DEDDh,DinG,WYL,csa3	NA|419aa|up_9|NZ_CP021256.1_1666178_1667435_-,NA|158aa|down_2|NZ_CP021256.1_1682325_1682799_-	NA|419aa|up_9|NZ_CP021256.1_1666178_1667435_-	NA	NA|445aa|up_8|NZ_CP021256.1_1667555_1668890_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|735aa|up_7|NZ_CP021256.1_1668895_1671100_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|122aa|up_6|NZ_CP021256.1_1671174_1671540_-	cd05560, Xcc1710_like, Xcc1710_like family, specific to proteobacteria	NA|398aa|up_5|NZ_CP021256.1_1671598_1672792_+	PRK08175, PRK08175, aminotransferase; Validated	NA|270aa|up_4|NZ_CP021256.1_1672795_1673605_+	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown]	NA|580aa|up_3|NZ_CP021256.1_1673594_1675334_+	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ	NA|331aa|up_2|NZ_CP021256.1_1675414_1676407_+	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA	NA|897aa|up_1|NZ_CP021256.1_1676507_1679198_+	PRK13104, secA, preprotein translocase subunit SecA; Reviewed	NA|134aa|up_0|NZ_CP021256.1_1679194_1679596_+	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi)	NA|249aa|down_0|NZ_CP021256.1_1680760_1681507_-	PRK05287, PRK05287, cell division protein ZapD	NA|204aa|down_1|NZ_CP021256.1_1681742_1682354_-	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|158aa|down_2|NZ_CP021256.1_1682325_1682799_-	NA	NA|534aa|down_3|NZ_CP021256.1_1682795_1684397_-	cd01948, EAL, EAL domain	NA|549aa|down_4|NZ_CP021256.1_1684543_1686190_+	COG2027, DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane]	NA|445aa|down_5|NZ_CP021256.1_1686442_1687777_-	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase	NA|316aa|down_6|NZ_CP021256.1_1687849_1688797_+	TIGR00433, biotin_synthase, biotin synthase	NA|381aa|down_7|NZ_CP021256.1_1688797_1689940_+	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|240aa|down_8|NZ_CP021256.1_1689923_1690643_+	TIGR01738, Pimeloyl-_methyl_ester_esterase, pimelyl-[acyl-carrier protein] methyl ester esterase	NA|213aa|down_9|NZ_CP021256.1_1690639_1691278_+	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD
