assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003003755.1_ASM300375v1	NZ_CP021265	Legionella pneumophila subsp. fraseri strain Los Angeles 1 (D-7696) chromosome, complete genome	1	1750864-1750984	1	CRISPRCasFinder	no		RT,cas3,DEDDh,DinG,PD-DExK,WYL,csa3,cas6f,cas5,cas7f,cas3f,cas1	Orphan	CCTGGCAGCAGCGCTGATCAGCATTCCAAAAAGC	34	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,DEDDh,DinG,PD-DExK,WYL,csa3,cas6f,cas5,cas7f,cas3f,cas1	NA|475aa|up_5|NZ_CP021265.1_1744126_1745551_+,NA|62aa|up_0|NZ_CP021265.1_1750467_1750653_-,NA|327aa|down_3|NZ_CP021265.1_1755154_1756135_-	NA|673aa|up_9|NZ_CP021265.1_1737237_1739256_-	PRK11154, fadJ, fatty acid oxidation complex subunit alpha FadJ	NA|440aa|up_8|NZ_CP021265.1_1739248_1740568_-	PRK08170, PRK08170, acetyl-CoA C-acetyltransferase	NA|355aa|up_7|NZ_CP021265.1_1740731_1741796_-	pfam18493, DUF5617, Domain of unknown function (DUF5617)	NA|473aa|up_6|NZ_CP021265.1_1742250_1743669_+	pfam14706, Tnp_DNA_bind, Transposase DNA-binding	NA|475aa|up_5|NZ_CP021265.1_1744126_1745551_+	NA	NA|226aa|up_4|NZ_CP021265.1_1745661_1746339_-	pfam08808, RES, RES domain	NA|125aa|up_3|NZ_CP021265.1_1746340_1746715_-	pfam09722, DUF2384, Protein of unknown function (DUF2384)	NA|219aa|up_2|NZ_CP021265.1_1746901_1747558_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|772aa|up_1|NZ_CP021265.1_1747778_1750094_+	COG2352, Ppc, Phosphoenolpyruvate carboxylase [Energy production and conversion]	NA|62aa|up_0|NZ_CP021265.1_1750467_1750653_-	NA	NA|418aa|down_0|NZ_CP021265.1_1751923_1753177_-	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|357aa|down_1|NZ_CP021265.1_1753185_1754256_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|142aa|down_2|NZ_CP021265.1_1754439_1754865_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|327aa|down_3|NZ_CP021265.1_1755154_1756135_-	NA	NA|316aa|down_4|NZ_CP021265.1_1756485_1757433_-	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|250aa|down_5|NZ_CP021265.1_1757756_1758506_-	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|176aa|down_6|NZ_CP021265.1_1758571_1759099_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|319aa|down_7|NZ_CP021265.1_1759095_1760052_-	pfam04229, GrpB, GrpB protein	NA|594aa|down_8|NZ_CP021265.1_1760055_1761837_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|487aa|down_9|NZ_CP021265.1_1761829_1763290_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
GCF_003003755.1_ASM300375v1	NZ_CP021265	Legionella pneumophila subsp. fraseri strain Los Angeles 1 (D-7696) chromosome, complete genome	2	2770496-2770668	2	CRISPRCasFinder	no		RT,cas3,DEDDh,DinG,PD-DExK,WYL,csa3,cas6f,cas5,cas7f,cas3f,cas1	Orphan	AAATTACTGTTATGGCGGTAAATTTACTCGA	31	0	0	NA	NA	NA	2	2	Orphan	RT,cas3,DEDDh,DinG,PD-DExK,WYL,csa3,cas6f,cas5,cas7f,cas3f,cas1	NA|485aa|up_9|NZ_CP021265.1_2761051_2762506_-,NA|301aa|up_8|NZ_CP021265.1_2762667_2763570_+,NA|119aa|up_6|NZ_CP021265.1_2765123_2765480_-,NA|388aa|up_3|NZ_CP021265.1_2767549_2768713_-,NA|88aa|down_3|NZ_CP021265.1_2775731_2775995_-,NA|220aa|down_4|NZ_CP021265.1_2776392_2777052_+,NA|276aa|down_8|NZ_CP021265.1_2782434_2783262_-	NA|485aa|up_9|NZ_CP021265.1_2761051_2762506_-	NA	NA|301aa|up_8|NZ_CP021265.1_2762667_2763570_+	NA	NA|214aa|up_7|NZ_CP021265.1_2764113_2764755_+	pfam09445, Methyltransf_15, RNA cap guanine-N2 methyltransferase	NA|119aa|up_6|NZ_CP021265.1_2765123_2765480_-	NA	NA|56aa|up_5|NZ_CP021265.1_2766078_2766246_+	pfam11752, DUF3309, Protein of unknown function (DUF3309)	NA|396aa|up_4|NZ_CP021265.1_2766370_2767558_+	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism]	NA|388aa|up_3|NZ_CP021265.1_2767549_2768713_-	NA	NA|313aa|up_2|NZ_CP021265.1_2769006_2769945_-	pfam07804, HipA_C, HipA-like C-terminal domain	NA|103aa|up_1|NZ_CP021265.1_2769941_2770250_-	TIGR03071, couple_hipA, HipA N-terminal domain	NA|76aa|up_0|NZ_CP021265.1_2770246_2770474_-	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|306aa|down_0|NZ_CP021265.1_2770914_2771832_-	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|249aa|down_1|NZ_CP021265.1_2772002_2772749_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|510aa|down_2|NZ_CP021265.1_2772760_2774290_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|88aa|down_3|NZ_CP021265.1_2775731_2775995_-	NA	NA|220aa|down_4|NZ_CP021265.1_2776392_2777052_+	NA	NA|274aa|down_5|NZ_CP021265.1_2777332_2778154_+	pfam13475, DUF4116, Domain of unknown function (DUF4116)	NA|566aa|down_6|NZ_CP021265.1_2778277_2779975_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|666aa|down_7|NZ_CP021265.1_2780334_2782332_+	cd07207, Pat_ExoU_VipD_like, ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2	NA|276aa|down_8|NZ_CP021265.1_2782434_2783262_-	NA	NA|360aa|down_9|NZ_CP021265.1_2783732_2784812_+	PRK11289, ampC, beta-lactamase/D-alanine carboxypeptidase; Provisional
GCF_003003755.1_ASM300375v1	NZ_CP021265	Legionella pneumophila subsp. fraseri strain Los Angeles 1 (D-7696) chromosome, complete genome	3	3447799-3450166	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas5,cas7f,cas3f,cas1	RT,cas3,DEDDh,DinG,PD-DExK,WYL,csa3,cas6f,cas5,cas7f,cas3f,cas1	Unclear	CTTCTAAGCTGCCTGTGCGGCAGTGAAC,CTTCTAAGCTGCCTGTGCGGCAGTGAAC,CTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	39,39,39	39	Unclear	RT,cas3,DEDDh,DinG,PD-DExK,WYL,csa3,cas6f,cas5,cas7f,cas3f,cas1	NA|87aa|up_7|NZ_CP021265.1_3437875_3438136_-,NA|322aa|up_6|NZ_CP021265.1_3438357_3439323_+,NA|76aa|up_1|NZ_CP021265.1_3446429_3446657_+,cas5|339aa|down_1|NZ_CP021265.1_3450993_3452010_-,cas7f|319aa|down_2|NZ_CP021265.1_3452013_3452970_-,NA|168aa|down_5|NZ_CP021265.1_3457997_3458501_-	NA|62aa|up_9|NZ_CP021265.1_3437381_3437567_+	TIGR01411, Sec-independent_protein_translocase_protein_TatA, twin arginine-targeting protein translocase, TatA/E family	NA|90aa|up_8|NZ_CP021265.1_3437563_3437833_+	COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion]	NA|87aa|up_7|NZ_CP021265.1_3437875_3438136_-	NA	NA|322aa|up_6|NZ_CP021265.1_3438357_3439323_+	NA	NA|290aa|up_5|NZ_CP021265.1_3439346_3440216_-	PRK05550, PRK05550, bifunctional methionine sulfoxide reductase B/A protein; Provisional	NA|63aa|up_4|NZ_CP021265.1_3440877_3441066_+	pfam13770, DUF4169, Domain of unknown function (DUF4169)	NA|645aa|up_3|NZ_CP021265.1_3441153_3443088_-	PRK11504, tynA, primary-amine oxidase	NA|329aa|up_2|NZ_CP021265.1_3444510_3445497_+	pfam05150, Legionella_OMP, Legionella pneumophila major outer membrane protein precursor	NA|76aa|up_1|NZ_CP021265.1_3446429_3446657_+	NA	NA|319aa|up_0|NZ_CP021265.1_3446687_3447644_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	cas6f|185aa|down_0|NZ_CP021265.1_3450428_3450983_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas5|339aa|down_1|NZ_CP021265.1_3450993_3452010_-	NA	cas7f|319aa|down_2|NZ_CP021265.1_3452013_3452970_-	NA	cas3f|993aa|down_3|NZ_CP021265.1_3453001_3455980_-	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas1|323aa|down_4|NZ_CP021265.1_3455976_3456945_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|168aa|down_5|NZ_CP021265.1_3457997_3458501_-	NA	NA|349aa|down_6|NZ_CP021265.1_3458609_3459656_-	COG0493, GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]	NA|321aa|down_7|NZ_CP021265.1_3459973_3460936_-	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase	NA|398aa|down_8|NZ_CP021265.1_3461302_3462496_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|230aa|down_9|NZ_CP021265.1_3462492_3463182_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
