assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003018135.1_ASM301813v1	NZ_CP027472	Escherichia coli strain 2014C-3050 chromosome, complete genome	1	1193528-1193651	1	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	NA,NA|30aa|down_6|NZ_CP027472.1_1202548_1202638_+	NA|471aa|up_9|NZ_CP027472.1_1182981_1184394_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP027472.1_1184950_1185160_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP027472.1_1185615_1186242_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP027472.1_1186262_1188365_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP027472.1_1188368_1189016_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP027472.1_1189079_1189748_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP027472.1_1189744_1190530_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP027472.1_1190533_1191346_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP027472.1_1191357_1192962_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP027472.1_1193087_1193393_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP027472.1_1193965_1195222_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP027472.1_1195262_1196636_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP027472.1_1196850_1197492_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP027472.1_1197531_1198680_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|311aa|down_4|NZ_CP027472.1_1200295_1201228_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_5|NZ_CP027472.1_1201224_1202250_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_6|NZ_CP027472.1_1202548_1202638_+	NA	NA|390aa|down_7|NZ_CP027472.1_1202803_1203973_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|NZ_CP027472.1_1204118_1204700_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|276aa|down_9|NZ_CP027472.1_1204827_1205655_-	pfam00877, NLPC_P60, NlpC/P60 family
GCF_003018135.1_ASM301813v1	NZ_CP027472	Escherichia coli strain 2014C-3050 chromosome, complete genome	2	1861295-1861498	1	PILER-CR	no		cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	Orphan	TCTCCCCACTTTTACTCCCCACTTTTT	27	1	1	1861432-1861489	NZ_CP027472.1_514087-514144	NA	2	2	Orphan	cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	NA|75aa|up_4|NZ_CP027472.1_1859685_1859910_-,NA|63aa|up_1|NZ_CP027472.1_1860740_1860929_-,NA|84aa|up_0|NZ_CP027472.1_1861042_1861294_-,NA|78aa|down_1|NZ_CP027472.1_1863195_1863429_-,NA|74aa|down_2|NZ_CP027472.1_1863430_1863652_-,NA|122aa|down_3|NZ_CP027472.1_1863644_1864010_-,NA|75aa|down_4|NZ_CP027472.1_1864002_1864227_-,NA|77aa|down_5|NZ_CP027472.1_1864216_1864447_-	NA|99aa|up_9|NZ_CP027472.1_1855783_1856080_-	TIGR01560, phage-related_hypothetical_protein, uncharacterized phage protein (possible DNA packaging)	NA|113aa|up_8|NZ_CP027472.1_1856076_1856415_-	COG5614, COG5614, Bacteriophage head-tail adaptor [General function prediction only]	NA|392aa|up_7|NZ_CP027472.1_1856411_1857587_-	COG4695, COG4695, Phage-related protein [Function unknown]	NA|191aa|up_6|NZ_CP027472.1_1857624_1858197_-	COG3740, COG3740, Phage head maturation protease [General function prediction only]	NA|386aa|up_5|NZ_CP027472.1_1858236_1859394_-	COG4653, COG4653, Predicted phage phi-C31 gp36 major capsid-like protein [General function prediction only]	NA|75aa|up_4|NZ_CP027472.1_1859685_1859910_-	NA	NA|91aa|up_3|NZ_CP027472.1_1860035_1860308_-	pfam06069, PerC, PerC transcriptional activator	NA|137aa|up_2|NZ_CP027472.1_1860320_1860731_-	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB)	NA|63aa|up_1|NZ_CP027472.1_1860740_1860929_-	NA	NA|84aa|up_0|NZ_CP027472.1_1861042_1861294_-	NA	NA|100aa|down_0|NZ_CP027472.1_1862890_1863190_-	pfam13973, DUF4222, Domain of unknown function (DUF4222)	NA|78aa|down_1|NZ_CP027472.1_1863195_1863429_-	NA	NA|74aa|down_2|NZ_CP027472.1_1863430_1863652_-	NA	NA|122aa|down_3|NZ_CP027472.1_1863644_1864010_-	NA	NA|75aa|down_4|NZ_CP027472.1_1864002_1864227_-	NA	NA|77aa|down_5|NZ_CP027472.1_1864216_1864447_-	NA	NA|426aa|down_6|NZ_CP027472.1_1864443_1865721_-	smart01040, Bro-N, BRO family, N-terminal domain	NA|63aa|down_7|NZ_CP027472.1_1865773_1865962_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|410aa|down_8|NZ_CP027472.1_1866326_1867556_-	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|374aa|down_9|NZ_CP027472.1_1867804_1868926_+	COG2850, COG2850, Uncharacterized conserved protein [Function unknown]
GCF_003018135.1_ASM301813v1	NZ_CP027472	Escherichia coli strain 2014C-3050 chromosome, complete genome	3	2143567-2143658	2	CRISPRCasFinder	no		cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	NA|70aa|up_9|NZ_CP027472.1_2132817_2133027_-,NA	NA|70aa|up_9|NZ_CP027472.1_2132817_2133027_-	NA	NA|1321aa|up_8|NZ_CP027472.1_2133081_2137044_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP027472.1_2137083_2137722_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP027472.1_2138009_2139101_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP027472.1_2139100_2139793_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP027472.1_2139804_2140191_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP027472.1_2140198_2140999_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP027472.1_2141008_2141599_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP027472.1_2141609_2142104_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP027472.1_2142124_2143453_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP027472.1_2144082_2144679_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP027472.1_2144699_2144927_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP027472.1_2144964_2146206_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|420aa|down_3|NZ_CP027472.1_2146497_2147757_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP027472.1_2148016_2148937_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP027472.1_2148936_2149242_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP027472.1_2149334_2149934_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP027472.1_2149930_2152477_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP027472.1_2152476_2153649_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP027472.1_2153778_2154471_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_003018135.1_ASM301813v1	NZ_CP027472	Escherichia coli strain 2014C-3050 chromosome, complete genome	4	2630946-2631090	3	CRISPRCasFinder	no		cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	NA|186aa|up_9|NZ_CP027472.1_2625169_2625727_+,NA|206aa|up_7|NZ_CP027472.1_2626282_2626900_+,NA|56aa|up_4|NZ_CP027472.1_2627548_2627716_+,NA|115aa|up_3|NZ_CP027472.1_2627744_2628089_+,NA	NA|186aa|up_9|NZ_CP027472.1_2625169_2625727_+	NA	NA|186aa|up_8|NZ_CP027472.1_2625723_2626281_+	pfam13935, Ead_Ea22, Ead/Ea22-like protein	NA|206aa|up_7|NZ_CP027472.1_2626282_2626900_+	NA	NA|101aa|up_6|NZ_CP027472.1_2626896_2627199_+	TIGR03655, hypothetical_protein_VT2-Sap32, restriction alleviation protein, Lar family	NA|95aa|up_5|NZ_CP027472.1_2627191_2627476_+	smart01022, ASCH, The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain	NA|56aa|up_4|NZ_CP027472.1_2627548_2627716_+	NA	NA|115aa|up_3|NZ_CP027472.1_2627744_2628089_+	NA	NA|73aa|up_2|NZ_CP027472.1_2628195_2628414_+	pfam07825, Exc, Excisionase-like protein	NA|357aa|up_1|NZ_CP027472.1_2628391_2629462_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|NZ_CP027472.1_2629596_2630880_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP027472.1_2631113_2633375_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP027472.1_2633557_2634991_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP027472.1_2635066_2636119_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP027472.1_2636302_2637256_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP027472.1_2637296_2638292_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP027472.1_2638446_2639265_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP027472.1_2639265_2640324_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP027472.1_2640326_2641016_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP027472.1_2641015_2641789_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP027472.1_2641954_2642104_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_003018135.1_ASM301813v1	NZ_CP027472	Escherichia coli strain 2014C-3050 chromosome, complete genome	5	3475445-3475577	2	PILER-CR	no		cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	Orphan	ATCACCAATATTGAAAA	17	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	NA|156aa|up_9|NZ_CP027472.1_3466686_3467154_+,NA	NA|156aa|up_9|NZ_CP027472.1_3466686_3467154_+	NA	NA|60aa|up_8|NZ_CP027472.1_3467252_3467432_-	pfam07362, CcdA, Post-segregation antitoxin CcdA	NA|160aa|up_7|NZ_CP027472.1_3467452_3467932_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP027472.1_3468123_3469986_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP027472.1_3469978_3470509_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP027472.1_3470616_3471948_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP027472.1_3472006_3472294_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP027472.1_3472290_3473577_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP027472.1_3473627_3474569_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP027472.1_3474583_3475354_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP027472.1_3475827_3477342_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP027472.1_3477372_3478515_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP027472.1_3478644_3479862_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP027472.1_3479935_3481489_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP027472.1_3481597_3482383_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP027472.1_3482388_3482979_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP027472.1_3483064_3483460_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP027472.1_3483720_3486942_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP027472.1_3486959_3488108_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP027472.1_3488563_3489385_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_003018135.1_ASM301813v1	NZ_CP027472	Escherichia coli strain 2014C-3050 chromosome, complete genome	6	5089006-5089123	4	CRISPRCasFinder	no		cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	40	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	NA,NA|55aa|down_0|NZ_CP027472.1_5089196_5089361_-	NA|115aa|up_9|NZ_CP027472.1_5076727_5077072_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_8|NZ_CP027472.1_5077260_5078199_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_7|NZ_CP027472.1_5078297_5079287_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_6|NZ_CP027472.1_5079308_5080640_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|up_5|NZ_CP027472.1_5080665_5081874_+	PRK12379, PRK12379, propionate kinase	NA|765aa|up_4|NZ_CP027472.1_5081907_5084202_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|NZ_CP027472.1_5084215_5084605_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|NZ_CP027472.1_5084676_5086041_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|NZ_CP027472.1_5086315_5087647_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|NZ_CP027472.1_5087674_5088985_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|NZ_CP027472.1_5089196_5089361_-	NA	NA|234aa|down_1|NZ_CP027472.1_5089383_5090085_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|NZ_CP027472.1_5090189_5091086_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|NZ_CP027472.1_5091136_5091493_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|NZ_CP027472.1_5091734_5092100_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|NZ_CP027472.1_5092392_5093379_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_6|NZ_CP027472.1_5093448_5093931_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_7|NZ_CP027472.1_5094026_5094326_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_8|NZ_CP027472.1_5094315_5094720_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|NZ_CP027472.1_5094722_5095028_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCF_003018135.1_ASM301813v1	NZ_CP027472	Escherichia coli strain 2014C-3050 chromosome, complete genome	7	5486154-5486792	5,1,3	CRISPRCasFinder,CRT,PILER-CR	no	cas3	cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GNGTTCCCCGCGCCAGCGGGGATAAACCG,TCCCCGCGCCAGCGGGGATAAACCG	29,29,25	0	0	NA	NA	I-E:I-E:I-E	10,10,10	10	Unclear	cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	NA|47aa|up_1|NZ_CP027472.1_5484863_5485004_-,NA	NA|434aa|up_9|NZ_CP027472.1_5475560_5476862_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP027472.1_5476909_5479144_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP027472.1_5479221_5479470_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP027472.1_5479469_5479805_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP027472.1_5479875_5480667_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP027472.1_5480894_5482532_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP027472.1_5482619_5483918_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP027472.1_5483977_5484850_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP027472.1_5484863_5485004_-	NA	NA|224aa|up_0|NZ_CP027472.1_5485142_5485814_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP027472.1_5487430_5488909_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP027472.1_5488935_5490213_-	cd06174, MFS, Major Facilitator Superfamily	NA|32aa|down_2|NZ_CP027472.1_5490530_5490626_+	PRK06935, PRK06935, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA|227aa|down_3|NZ_CP027472.1_5490635_5491316_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_4|NZ_CP027472.1_5491385_5492840_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_5|NZ_CP027472.1_5492933_5494271_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_6|NZ_CP027472.1_5494248_5495028_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_7|NZ_CP027472.1_5495024_5495885_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_8|NZ_CP027472.1_5496032_5496608_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_9|NZ_CP027472.1_5496624_5496885_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]
GCF_003018135.1_ASM301813v1	NZ_CP027472	Escherichia coli strain 2014C-3050 chromosome, complete genome	8	5512495-5513010	4,6,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	8,8,8	8	TypeI-E	cas3,DEDDh,c2c9_V-U4,DinG,PrimPol,csa3,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	NA,NA	NA|571aa|up_9|NZ_CP027472.1_5500704_5502417_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP027472.1_5502490_5503225_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_7|NZ_CP027472.1_5503489_5503642_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_6|NZ_CP027472.1_5503835_5506535_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_5|NZ_CP027472.1_5506632_5508195_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|180aa|up_4|NZ_CP027472.1_5508191_5508731_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_3|NZ_CP027472.1_5508742_5509798_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas6e|217aa|up_2|NZ_CP027472.1_5510537_5511188_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|NZ_CP027472.1_5511184_5512105_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP027472.1_5512104_5512398_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP027472.1_5513091_5514129_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP027472.1_5514380_5515289_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP027472.1_5515290_5516718_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP027472.1_5516717_5517323_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP027472.1_5517372_5517696_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP027472.1_5517889_5518201_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP027472.1_5518219_5518930_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP027472.1_5518929_5519409_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP027472.1_5519405_5520455_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP027472.1_5520435_5521197_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
