assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003018235.1_ASM301823v1	NZ_CP027437	Escherichia coli strain 2012C-4221 chromosome, complete genome	1	380297-380420	1	CRISPRCasFinder	no	DEDDh	cas14j,DEDDh,DinG,cas3,c2c9_V-U4,csa3,PD-DExK	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas14j,DEDDh,DinG,cas3,c2c9_V-U4,csa3,PD-DExK	NA,NA|30aa|down_7|NZ_CP027437.1_389317_389407_+	NA|471aa|up_9|NZ_CP027437.1_369747_371160_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP027437.1_371716_371926_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP027437.1_372383_373010_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP027437.1_373030_375133_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP027437.1_375136_375784_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP027437.1_375847_376516_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP027437.1_376512_377298_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP027437.1_377301_378114_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP027437.1_378125_379730_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP027437.1_379855_380161_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP027437.1_380735_381992_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP027437.1_382032_383406_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP027437.1_383620_384262_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP027437.1_384301_385450_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP027437.1_385740_386952_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP027437.1_387064_387997_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP027437.1_387993_389019_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP027437.1_389317_389407_+	NA	NA|390aa|down_8|NZ_CP027437.1_389572_390742_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP027437.1_390887_391469_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_003018235.1_ASM301823v1	NZ_CP027437	Escherichia coli strain 2012C-4221 chromosome, complete genome	2	1099439-1099530	2	CRISPRCasFinder	no		cas14j,DEDDh,DinG,cas3,c2c9_V-U4,csa3,PD-DExK	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas14j,DEDDh,DinG,cas3,c2c9_V-U4,csa3,PD-DExK	NA|70aa|up_9|NZ_CP027437.1_1088689_1088899_-,NA	NA|70aa|up_9|NZ_CP027437.1_1088689_1088899_-	NA	NA|1321aa|up_8|NZ_CP027437.1_1088953_1092916_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP027437.1_1092955_1093594_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP027437.1_1093881_1094973_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP027437.1_1094972_1095665_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP027437.1_1095676_1096063_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP027437.1_1096070_1096871_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP027437.1_1096880_1097471_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP027437.1_1097481_1097976_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP027437.1_1097996_1099325_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP027437.1_1099953_1100550_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP027437.1_1100570_1100798_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP027437.1_1100835_1102077_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|421aa|down_3|NZ_CP027437.1_1102368_1103631_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP027437.1_1103890_1104811_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP027437.1_1104810_1105116_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP027437.1_1105208_1105808_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP027437.1_1105804_1108351_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP027437.1_1108350_1109523_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP027437.1_1109652_1110345_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_003018235.1_ASM301823v1	NZ_CP027437	Escherichia coli strain 2012C-4221 chromosome, complete genome	3	4106130-4106402	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no		cas14j,DEDDh,DinG,cas3,c2c9_V-U4,csa3,PD-DExK	Orphan	GAGTTCCCCGCGCCAGCGGGGATAAAC,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	27,29,29	0	0	NA	NA	I-E:I-E:I-E	4,4,4	4	Orphan	cas14j,DEDDh,DinG,cas3,c2c9_V-U4,csa3,PD-DExK	NA,NA	NA|919aa|up_9|NZ_CP027437.1_4092721_4095478_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_8|NZ_CP027437.1_4095534_4096836_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|NZ_CP027437.1_4096883_4099118_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_6|NZ_CP027437.1_4099195_4099444_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_5|NZ_CP027437.1_4099443_4099779_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_4|NZ_CP027437.1_4099850_4100642_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|NZ_CP027437.1_4100869_4102507_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|NZ_CP027437.1_4102594_4103893_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_1|NZ_CP027437.1_4103952_4104825_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|224aa|up_0|NZ_CP027437.1_4105118_4105790_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|426aa|down_0|NZ_CP027437.1_4107951_4109229_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_1|NZ_CP027437.1_4109547_4110333_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_2|NZ_CP027437.1_4110402_4111857_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_3|NZ_CP027437.1_4111950_4113288_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_4|NZ_CP027437.1_4113265_4114045_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_5|NZ_CP027437.1_4114041_4114902_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_6|NZ_CP027437.1_4115049_4115625_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_7|NZ_CP027437.1_4115641_4115902_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_8|NZ_CP027437.1_4115892_4117164_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|down_9|NZ_CP027437.1_4117241_4117607_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)
