assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003018655.1_ASM301865v1	NZ_CP027312	Escherichia coli strain 2013C-3181 chromosome, complete genome	1	774947-775070	1	CRISPRCasFinder	no	DEDDh	DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|30aa|down_7|NZ_CP027312.1_783966_784056_+	NA|471aa|up_9|NZ_CP027312.1_764400_765813_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP027312.1_766369_766579_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP027312.1_767034_767661_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP027312.1_767681_769784_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP027312.1_769787_770435_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP027312.1_770498_771167_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP027312.1_771163_771949_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP027312.1_771952_772765_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP027312.1_772776_774381_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP027312.1_774506_774812_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP027312.1_775384_776641_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP027312.1_776681_778055_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP027312.1_778269_778911_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP027312.1_778950_780099_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP027312.1_780389_781601_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP027312.1_781713_782646_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP027312.1_782642_783668_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP027312.1_783966_784056_+	NA	NA|390aa|down_8|NZ_CP027312.1_784221_785391_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP027312.1_785536_786118_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_003018655.1_ASM301865v1	NZ_CP027312	Escherichia coli strain 2013C-3181 chromosome, complete genome	2	1409072-1409274	1	PILER-CR	no		DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TCTCCCCACTTTTACTCCCCACTTTTT	27	0	0	NA	NA	NA	2	2	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|94aa|up_7|NZ_CP027312.1_1404664_1404946_-,NA|138aa|up_5|NZ_CP027312.1_1405948_1406362_-,NA|69aa|up_2|NZ_CP027312.1_1407776_1407983_-,NA|84aa|up_0|NZ_CP027312.1_1408819_1409071_-,NA|78aa|down_1|NZ_CP027312.1_1410983_1411217_-,NA|74aa|down_2|NZ_CP027312.1_1411218_1411440_-,NA|87aa|down_3|NZ_CP027312.1_1411412_1411673_-,NA|66aa|down_4|NZ_CP027312.1_1411867_1412065_-,NA|60aa|down_5|NZ_CP027312.1_1412257_1412437_+,NA|76aa|down_6|NZ_CP027312.1_1412494_1412722_+,NA|62aa|down_7|NZ_CP027312.1_1412936_1413122_+,NA|68aa|down_8|NZ_CP027312.1_1413179_1413383_+	NA|224aa|up_9|NZ_CP027312.1_1401683_1402355_+	PRK10816, PRK10816, two-component system response regulator PhoP	NA|487aa|up_8|NZ_CP027312.1_1402354_1403815_+	PRK10815, PRK10815, two-component system sensor histidine kinase PhoQ	NA|94aa|up_7|NZ_CP027312.1_1404664_1404946_-	NA	NA|171aa|up_6|NZ_CP027312.1_1405201_1405714_-	COG4220, COG4220, Phage DNA packaging protein, Nu1 subunit of terminase [DNA replication, recombination, and repair]	NA|138aa|up_5|NZ_CP027312.1_1405948_1406362_-	NA	NA|112aa|up_4|NZ_CP027312.1_1406374_1406710_-	pfam02924, HDPD, Bacteriophage lambda head decoration protein D	NA|352aa|up_3|NZ_CP027312.1_1406721_1407777_-	pfam03864, Phage_cap_E, Phage major capsid protein E	NA|69aa|up_2|NZ_CP027312.1_1407776_1407983_-	NA	NA|141aa|up_1|NZ_CP027312.1_1408400_1408823_-	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB)	NA|84aa|up_0|NZ_CP027312.1_1408819_1409071_-	NA	NA|100aa|down_0|NZ_CP027312.1_1410678_1410978_-	pfam13973, DUF4222, Domain of unknown function (DUF4222)	NA|78aa|down_1|NZ_CP027312.1_1410983_1411217_-	NA	NA|74aa|down_2|NZ_CP027312.1_1411218_1411440_-	NA	NA|87aa|down_3|NZ_CP027312.1_1411412_1411673_-	NA	NA|66aa|down_4|NZ_CP027312.1_1411867_1412065_-	NA	NA|60aa|down_5|NZ_CP027312.1_1412257_1412437_+	NA	NA|76aa|down_6|NZ_CP027312.1_1412494_1412722_+	NA	NA|62aa|down_7|NZ_CP027312.1_1412936_1413122_+	NA	NA|68aa|down_8|NZ_CP027312.1_1413179_1413383_+	NA	NA|63aa|down_9|NZ_CP027312.1_1413626_1413815_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]
GCF_003018655.1_ASM301865v1	NZ_CP027312	Escherichia coli strain 2013C-3181 chromosome, complete genome	3	1535212-1535303	2	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|70aa|up_9|NZ_CP027312.1_1524462_1524672_-,NA|417aa|down_1|NZ_CP027312.1_1544736_1545987_-,NA|149aa|down_3|NZ_CP027312.1_1546258_1546705_-,NA|219aa|down_4|NZ_CP027312.1_1546707_1547364_-,NA|129aa|down_5|NZ_CP027312.1_1547458_1547845_-,NA|206aa|down_8|NZ_CP027312.1_1549097_1549715_-,NA|93aa|down_9|NZ_CP027312.1_1549720_1549999_-	NA|70aa|up_9|NZ_CP027312.1_1524462_1524672_-	NA	NA|1321aa|up_8|NZ_CP027312.1_1524726_1528689_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP027312.1_1528728_1529367_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP027312.1_1529654_1530746_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP027312.1_1530745_1531438_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP027312.1_1531449_1531836_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP027312.1_1531843_1532644_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP027312.1_1532653_1533244_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP027312.1_1533254_1533749_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP027312.1_1533769_1535098_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|2794aa|down_0|NZ_CP027312.1_1536285_1544667_-	pfam18799, LPD5, Large polyvalent protein-associated domain 5	NA|417aa|down_1|NZ_CP027312.1_1544736_1545987_-	NA	NA|84aa|down_2|NZ_CP027312.1_1545997_1546249_-	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein	NA|149aa|down_3|NZ_CP027312.1_1546258_1546705_-	NA	NA|219aa|down_4|NZ_CP027312.1_1546707_1547364_-	NA	NA|129aa|down_5|NZ_CP027312.1_1547458_1547845_-	NA	NA|47aa|down_6|NZ_CP027312.1_1547901_1548042_-	PRK09759, PRK09759, type I toxin-antitoxin system toxin HokA	NA|245aa|down_7|NZ_CP027312.1_1548272_1549007_-	pfam06316, Ail_Lom, Enterobacterial Ail/Lom protein	NA|206aa|down_8|NZ_CP027312.1_1549097_1549715_-	NA	NA|93aa|down_9|NZ_CP027312.1_1549720_1549999_-	NA
GCF_003018655.1_ASM301865v1	NZ_CP027312	Escherichia coli strain 2013C-3181 chromosome, complete genome	4	1866386-1866530	3	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|330aa|up_9|NZ_CP027312.1_1854284_1855274_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP027312.1_1855670_1856579_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP027312.1_1856770_1858792_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP027312.1_1859370_1860048_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP027312.1_1860040_1860796_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP027312.1_1860782_1861937_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP027312.1_1861933_1862974_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP027312.1_1863060_1864350_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP027312.1_1864408_1864885_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP027312.1_1865036_1866320_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP027312.1_1866553_1868815_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP027312.1_1868997_1870431_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP027312.1_1870506_1871559_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP027312.1_1871742_1872696_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP027312.1_1872736_1873732_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP027312.1_1873886_1874705_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP027312.1_1874705_1875764_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP027312.1_1875766_1876456_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP027312.1_1876455_1877229_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP027312.1_1877395_1877545_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_003018655.1_ASM301865v1	NZ_CP027312	Escherichia coli strain 2013C-3181 chromosome, complete genome	5	4288244-4288640	2	PILER-CR	no		DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GGGGCAGAAAGATGAATGACTGTCCACGACGCTATACCCAAAAGAAAGCGGCTTATC	57	3	3	4288301-4288356|4288414-4288470|4288528-4288583	NZ_CP027312.1_4288188-4288243|NZ_CP027312.1_4288188-4288244|NZ_CP027312.1_4288188-4288243	NA	3	3	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|180aa|down_1|NZ_CP027312.1_4290137_4290677_-	NA|158aa|up_9|NZ_CP027312.1_4277726_4278200_-	PRK11425, PRK11425, PTS N-acetylgalactosamine transporter subunit IIB	NA|427aa|up_8|NZ_CP027312.1_4278222_4279503_-	PRK15458, PRK15458, tagatose 6-phosphate aldolase subunit KbaZ; Provisional	NA|270aa|up_7|NZ_CP027312.1_4279751_4280561_+	PRK09802, PRK09802, DeoR family transcriptional regulator	NA|155aa|up_6|NZ_CP027312.1_4280615_4281080_-	pfam11663, Toxin_YhaV, Toxin with endonuclease activity, of toxin-antitoxin system	NA|112aa|up_5|NZ_CP027312.1_4281079_4281415_-	PRK09974, PRK09974, type II toxin-antitoxin system PrlF family antitoxin	NA|524aa|up_4|NZ_CP027312.1_4281563_4283135_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|445aa|up_3|NZ_CP027312.1_4283509_4284844_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|257aa|up_2|NZ_CP027312.1_4284859_4285630_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_1|NZ_CP027312.1_4285659_4286550_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|382aa|up_0|NZ_CP027312.1_4286646_4287792_+	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|396aa|down_0|NZ_CP027312.1_4288928_4290116_-	PRK09716, PRK09716, YhaC family protein	NA|180aa|down_1|NZ_CP027312.1_4290137_4290677_-	NA	NA|115aa|down_2|NZ_CP027312.1_4290932_4291277_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|down_3|NZ_CP027312.1_4291465_4292404_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|down_4|NZ_CP027312.1_4292502_4293492_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|down_5|NZ_CP027312.1_4293513_4294845_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|765aa|down_6|NZ_CP027312.1_4296112_4298407_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|down_7|NZ_CP027312.1_4298420_4298810_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|down_8|NZ_CP027312.1_4298881_4300246_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|down_9|NZ_CP027312.1_4300520_4301852_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter
GCF_003018655.1_ASM301865v1	NZ_CP027312	Escherichia coli strain 2013C-3181 chromosome, complete genome	6	4303211-4303328	4	CRISPRCasFinder	no		DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|180aa|up_9|NZ_CP027312.1_4290137_4290677_-,NA|55aa|down_0|NZ_CP027312.1_4303401_4303566_-	NA|180aa|up_9|NZ_CP027312.1_4290137_4290677_-	NA	NA|115aa|up_8|NZ_CP027312.1_4290932_4291277_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_7|NZ_CP027312.1_4291465_4292404_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_6|NZ_CP027312.1_4292502_4293492_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_5|NZ_CP027312.1_4293513_4294845_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|765aa|up_4|NZ_CP027312.1_4296112_4298407_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|NZ_CP027312.1_4298420_4298810_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|NZ_CP027312.1_4298881_4300246_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|NZ_CP027312.1_4300520_4301852_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|NZ_CP027312.1_4301879_4303190_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|NZ_CP027312.1_4303401_4303566_-	NA	NA|234aa|down_1|NZ_CP027312.1_4303588_4304290_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|NZ_CP027312.1_4304394_4305291_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|NZ_CP027312.1_4305341_4305698_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|NZ_CP027312.1_4305939_4306305_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|NZ_CP027312.1_4306597_4307584_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_6|NZ_CP027312.1_4307653_4308136_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_7|NZ_CP027312.1_4308231_4308531_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_8|NZ_CP027312.1_4308520_4308925_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|NZ_CP027312.1_4308927_4309233_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCF_003018655.1_ASM301865v1	NZ_CP027312	Escherichia coli strain 2013C-3181 chromosome, complete genome	7	4788784-4790276	3,5,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	23,24,24	24	TypeI-E	DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|121aa|up_3|NZ_CP027312.1_4785680_4786043_-,NA	NA|745aa|up_9|NZ_CP027312.1_4778616_4780851_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_8|NZ_CP027312.1_4780928_4781177_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_7|NZ_CP027312.1_4781176_4781512_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_6|NZ_CP027312.1_4781582_4782374_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_5|NZ_CP027312.1_4782601_4784239_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_4|NZ_CP027312.1_4784326_4785625_+	PRK00077, eno, enolase; Provisional	NA|121aa|up_3|NZ_CP027312.1_4785680_4786043_-	NA	NA|302aa|up_2|NZ_CP027312.1_4786078_4786984_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|201aa|up_1|NZ_CP027312.1_4786997_4787600_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP027312.1_4787772_4788444_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|122aa|down_0|NZ_CP027312.1_4791508_4791874_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_1|NZ_CP027312.1_4792189_4793989_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_2|NZ_CP027312.1_4793988_4795701_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_3|NZ_CP027312.1_4795774_4796509_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|down_4|NZ_CP027312.1_4796773_4796926_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|down_5|NZ_CP027312.1_4797119_4799819_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|down_6|NZ_CP027312.1_4799916_4801479_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|down_7|NZ_CP027312.1_4801475_4802012_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|down_8|NZ_CP027312.1_4802026_4803082_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|down_9|NZ_CP027312.1_4803092_4803839_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5
GCF_003018655.1_ASM301865v1	NZ_CP027312	Escherichia coli strain 2013C-3181 chromosome, complete genome	8	4805778-4805929	4,6	PILER-CR,CRISPRCasFinder	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCGC,GTGTTCCCCGCGCCAGCGGGGATAAACCG	30,29	0	0	NA	NA	I-E:I-E	2,2	2	TypeI-E	DEDDh,DinG,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|245aa|up_9|NZ_CP027312.1_4795774_4796509_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP027312.1_4796773_4796926_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP027312.1_4797119_4799819_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP027312.1_4799916_4801479_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP027312.1_4801475_4802012_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP027312.1_4802026_4803082_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP027312.1_4803092_4803839_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP027312.1_4803820_4804471_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP027312.1_4804467_4805391_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP027312.1_4805387_4805681_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP027312.1_4806010_4807048_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP027312.1_4807299_4808208_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP027312.1_4808209_4809637_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP027312.1_4809636_4810242_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP027312.1_4810291_4810615_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP027312.1_4810808_4811120_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP027312.1_4811138_4811849_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP027312.1_4811848_4812328_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP027312.1_4812324_4813374_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP027312.1_4813354_4814116_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
