assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003018895.1_ASM301889v1	NZ_CP027387	Escherichia coli strain 2014C-3057 chromosome, complete genome	1	283510-283654	1	CRISPRCasFinder	no		DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	NA|186aa|up_9|NZ_CP027387.1_276420_276978_+,NA|206aa|up_7|NZ_CP027387.1_277533_278151_+,NA|56aa|up_4|NZ_CP027387.1_280112_280280_+,NA|115aa|up_3|NZ_CP027387.1_280308_280653_+,NA	NA|186aa|up_9|NZ_CP027387.1_276420_276978_+	NA	NA|186aa|up_8|NZ_CP027387.1_276974_277532_+	pfam13935, Ead_Ea22, Ead/Ea22-like protein	NA|206aa|up_7|NZ_CP027387.1_277533_278151_+	NA	NA|101aa|up_6|NZ_CP027387.1_278147_278450_+	TIGR03655, hypothetical_protein_VT2-Sap32, restriction alleviation protein, Lar family	NA|405aa|up_5|NZ_CP027387.1_278603_279817_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|56aa|up_4|NZ_CP027387.1_280112_280280_+	NA	NA|115aa|up_3|NZ_CP027387.1_280308_280653_+	NA	NA|73aa|up_2|NZ_CP027387.1_280759_280978_+	pfam07825, Exc, Excisionase-like protein	NA|357aa|up_1|NZ_CP027387.1_280955_282026_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|NZ_CP027387.1_282160_283444_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP027387.1_283677_285939_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP027387.1_286121_287555_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP027387.1_287630_288683_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP027387.1_288866_289820_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP027387.1_289860_290856_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP027387.1_291010_291829_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP027387.1_291829_292888_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP027387.1_292890_293580_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP027387.1_293579_294353_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP027387.1_294518_294668_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_003018895.1_ASM301889v1	NZ_CP027387	Escherichia coli strain 2014C-3057 chromosome, complete genome	2	1347776-1347925	2	CRISPRCasFinder	no		DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	Orphan	ACACAGCACCGAACTCGTAGGCCTGATAAGACACAACAGCGTCGCATCAGGC	52	1	1	1347828-1347873	NZ_CP027387.1_1347732-1347777	NA	1	1	Orphan	DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	NA|529aa|up_7|NZ_CP027387.1_1336378_1337965_+,NA|504aa|down_5|NZ_CP027387.1_1355035_1356547_-	NA|116aa|up_9|NZ_CP027387.1_1335064_1335412_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|226aa|up_8|NZ_CP027387.1_1335411_1336089_-	pfam01527, HTH_Tnp_1, Transposase	NA|529aa|up_7|NZ_CP027387.1_1336378_1337965_+	NA	NA|280aa|up_6|NZ_CP027387.1_1338103_1338943_+	PRK11001, mtlR, MltR family transcriptional regulator	NA|421aa|up_5|NZ_CP027387.1_1339186_1340449_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|NZ_CP027387.1_1340892_1341912_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP027387.1_1342041_1343544_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP027387.1_1343662_1344745_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP027387.1_1344744_1345845_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP027387.1_1346111_1347623_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP027387.1_1347977_1348421_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP027387.1_1348420_1351276_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|168aa|down_2|NZ_CP027387.1_1352718_1353222_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_3|NZ_CP027387.1_1353267_1353684_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|338aa|down_4|NZ_CP027387.1_1353845_1354859_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|504aa|down_5|NZ_CP027387.1_1355035_1356547_-	NA	NA|151aa|down_6|NZ_CP027387.1_1356669_1357122_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_7|NZ_CP027387.1_1357266_1357860_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_8|NZ_CP027387.1_1357930_1358644_+	PRK12742, PRK12742, SDR family oxidoreductase	NA|132aa|down_9|NZ_CP027387.1_1358774_1359170_+	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
GCF_003018895.1_ASM301889v1	NZ_CP027387	Escherichia coli strain 2014C-3057 chromosome, complete genome	3	2683871-2683988	3	CRISPRCasFinder	no		DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	40	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	NA,NA|55aa|down_0|NZ_CP027387.1_2684061_2684226_-	NA|115aa|up_9|NZ_CP027387.1_2671592_2671937_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_8|NZ_CP027387.1_2672125_2673064_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_7|NZ_CP027387.1_2673162_2674152_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_6|NZ_CP027387.1_2674173_2675505_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|up_5|NZ_CP027387.1_2675530_2676739_+	PRK12379, PRK12379, propionate kinase	NA|765aa|up_4|NZ_CP027387.1_2676772_2679067_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|NZ_CP027387.1_2679080_2679470_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|NZ_CP027387.1_2679541_2680906_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|NZ_CP027387.1_2681180_2682512_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|NZ_CP027387.1_2682539_2683850_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|NZ_CP027387.1_2684061_2684226_-	NA	NA|234aa|down_1|NZ_CP027387.1_2684248_2684950_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|NZ_CP027387.1_2685054_2685951_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|NZ_CP027387.1_2686001_2686358_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|NZ_CP027387.1_2686599_2686965_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|NZ_CP027387.1_2687257_2688244_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_6|NZ_CP027387.1_2688313_2688796_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_7|NZ_CP027387.1_2688891_2689191_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_8|NZ_CP027387.1_2689180_2689585_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|NZ_CP027387.1_2689587_2689893_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCF_003018895.1_ASM301889v1	NZ_CP027387	Escherichia coli strain 2014C-3057 chromosome, complete genome	4	3069262-3069839	4,1,1	CRISPRCasFinder,CRT,PILER-CR	no		DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GNGTTCCCCGCGCCAGCGGGGATAAACCG,TCCCCGCGCCAGCGGGGATAAACC	29,29,24	0	0	NA	NA	I-E:I-E:I-E	9,9,8	9	Orphan	DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	NA|47aa|up_1|NZ_CP027387.1_3067971_3068112_-,NA	NA|434aa|up_9|NZ_CP027387.1_3058668_3059970_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP027387.1_3060017_3062252_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP027387.1_3062329_3062578_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP027387.1_3062577_3062913_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP027387.1_3062983_3063775_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP027387.1_3064002_3065640_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP027387.1_3065727_3067026_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP027387.1_3067085_3067958_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP027387.1_3067971_3068112_-	NA	NA|224aa|up_0|NZ_CP027387.1_3068250_3068922_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP027387.1_3070477_3071956_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP027387.1_3071982_3073260_-	cd06174, MFS, Major Facilitator Superfamily	NA|32aa|down_2|NZ_CP027387.1_3073577_3073673_+	PRK06935, PRK06935, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA|227aa|down_3|NZ_CP027387.1_3073682_3074363_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_4|NZ_CP027387.1_3074432_3075887_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_5|NZ_CP027387.1_3075980_3077318_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_6|NZ_CP027387.1_3077295_3078075_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_7|NZ_CP027387.1_3078071_3078932_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_8|NZ_CP027387.1_3079079_3079655_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_9|NZ_CP027387.1_3079671_3079932_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]
GCF_003018895.1_ASM301889v1	NZ_CP027387	Escherichia coli strain 2014C-3057 chromosome, complete genome	5	3095541-3095996	2,5,2	PILER-CR,CRISPRCasFinder,CRT	no	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	7,7,7	7	TypeI-E	DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	NA,NA	NA|571aa|up_9|NZ_CP027387.1_3083751_3085464_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP027387.1_3085537_3086272_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_7|NZ_CP027387.1_3086536_3086689_+	pfam01848, HOK_GEF, Hok/gef family	cas8e|521aa|up_6|NZ_CP027387.1_3089679_3091242_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|180aa|up_5|NZ_CP027387.1_3091238_3091778_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP027387.1_3091789_3092845_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP027387.1_3092855_3093602_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP027387.1_3093583_3094234_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|NZ_CP027387.1_3094230_3095151_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP027387.1_3095150_3095444_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP027387.1_3096077_3097115_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP027387.1_3097366_3098275_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP027387.1_3098276_3099704_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP027387.1_3099703_3100309_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP027387.1_3100358_3100682_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP027387.1_3100875_3101187_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|160aa|down_6|NZ_CP027387.1_3101914_3102394_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_7|NZ_CP027387.1_3102390_3103440_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_8|NZ_CP027387.1_3103420_3104182_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|209aa|down_9|NZ_CP027387.1_3104175_3104802_+	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase
GCF_003018895.1_ASM301889v1	NZ_CP027387	Escherichia coli strain 2014C-3057 chromosome, complete genome	6	4497503-4497626	6	CRISPRCasFinder	no	DEDDh	DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	NA,NA|30aa|down_7|NZ_CP027387.1_4506522_4506612_+	NA|471aa|up_9|NZ_CP027387.1_4486956_4488369_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP027387.1_4488925_4489135_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP027387.1_4489590_4490217_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP027387.1_4490237_4492340_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP027387.1_4492343_4492991_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP027387.1_4493054_4493723_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP027387.1_4493719_4494505_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP027387.1_4494508_4495321_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP027387.1_4495332_4496937_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP027387.1_4497062_4497368_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP027387.1_4497940_4499197_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP027387.1_4499237_4500611_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP027387.1_4500825_4501467_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP027387.1_4501506_4502655_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP027387.1_4502945_4504157_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP027387.1_4504269_4505202_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP027387.1_4505198_4506224_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP027387.1_4506522_4506612_+	NA	NA|390aa|down_8|NZ_CP027387.1_4506777_4507947_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP027387.1_4508092_4508674_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_003018895.1_ASM301889v1	NZ_CP027387	Escherichia coli strain 2014C-3057 chromosome, complete genome	7	5545403-5545494	7	CRISPRCasFinder	no		DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,c2c9_V-U4,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,PrimPol	NA|70aa|up_9|NZ_CP027387.1_5534653_5534863_-,NA|26aa|down_0|NZ_CP027387.1_5546912_5546990_-,NA|58aa|down_8|NZ_CP027387.1_5555501_5555675_-	NA|70aa|up_9|NZ_CP027387.1_5534653_5534863_-	NA	NA|1321aa|up_8|NZ_CP027387.1_5534917_5538880_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP027387.1_5538919_5539558_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP027387.1_5539845_5540937_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP027387.1_5540936_5541629_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP027387.1_5541640_5542027_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP027387.1_5542034_5542835_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP027387.1_5542844_5543435_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP027387.1_5543445_5543940_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP027387.1_5543960_5545289_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|26aa|down_0|NZ_CP027387.1_5546912_5546990_-	NA	NA|90aa|down_1|NZ_CP027387.1_5547100_5547370_-	pfam06820, Phage_fiber_C, Putative prophage tail fibre C-terminus	NA|438aa|down_2|NZ_CP027387.1_5547371_5548685_-	pfam08400, phage_tail_N, Prophage tail fibre N-terminal	NA|200aa|down_3|NZ_CP027387.1_5548749_5549349_-	pfam06316, Ail_Lom, Enterobacterial Ail/Lom protein	NA|1159aa|down_4|NZ_CP027387.1_5549415_5552892_-	COG4733, COG4733, Phage-related protein, tail component [Function unknown]	NA|211aa|down_5|NZ_CP027387.1_5553137_5553770_-	COG4723, COG4723, Phage-related protein, tail component [Function unknown]	NA|246aa|down_6|NZ_CP027387.1_5553715_5554453_-	cd08073, MPN_NLPC_P60, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains	NA|308aa|down_7|NZ_CP027387.1_5554507_5555431_-	pfam10547, P22_AR_N, P22_AR N-terminal domain	NA|58aa|down_8|NZ_CP027387.1_5555501_5555675_-	NA	NA|107aa|down_9|NZ_CP027387.1_5555782_5556103_+	pfam03869, Arc, Arc-like DNA binding domain
