assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003020725.1_ASM302072v1	NZ_CP027512	Enterococcus faecium strain AUSMDU00004028 chromosome, complete genome	1	2400646-2400755	1	CRISPRCasFinder	no		cas14j,cas3,RT,DEDDh,cas2,DinG,csa3	Orphan	CTTTGCTCAACCAGTATTATTCATCA	26	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,RT,DEDDh,cas2,DinG,csa3	NA,NA	NA|720aa|up_9|NZ_CP027512.1_2388185_2390345_+	PRK07306, PRK07306, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|322aa|up_8|NZ_CP027512.1_2390394_2391360_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|380aa|up_7|NZ_CP027512.1_2391448_2392588_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|238aa|up_6|NZ_CP027512.1_2392896_2393610_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|234aa|up_5|NZ_CP027512.1_2393863_2394565_-	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|511aa|up_4|NZ_CP027512.1_2394798_2396331_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|303aa|up_3|NZ_CP027512.1_2396720_2397629_-	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|230aa|up_2|NZ_CP027512.1_2398853_2399543_-	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|123aa|up_1|NZ_CP027512.1_2399648_2400017_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|168aa|up_0|NZ_CP027512.1_2400069_2400573_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|230aa|down_0|NZ_CP027512.1_2400982_2401672_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|141aa|down_1|NZ_CP027512.1_2401775_2402198_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|223aa|down_2|NZ_CP027512.1_2402540_2403209_+	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism]	NA|291aa|down_3|NZ_CP027512.1_2403221_2404094_+	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|340aa|down_4|NZ_CP027512.1_2404184_2405204_-	cd04737, LOX_like_FMN, L-Lactate oxidase (LOX) FMN-binding domain	NA|296aa|down_5|NZ_CP027512.1_2405376_2406264_-	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915)	NA|182aa|down_6|NZ_CP027512.1_2406340_2406886_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|57aa|down_7|NZ_CP027512.1_2406986_2407157_-	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex	NA|51aa|down_8|NZ_CP027512.1_2407180_2407333_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|215aa|down_9|NZ_CP027512.1_2407494_2408139_+	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily
GCF_003020725.1_ASM302072v1	NZ_CP027513	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence	1	430-557	1	CRISPRCasFinder	no	RT	RT,cas14j,csa3	Unclear	TCAGAGGGTATGAAAATCATACC	23	0	0	NA	NA	NA	2	2	Orphan	cas14j,cas3,RT,DEDDh,cas2,DinG,csa3	NA,NA|111aa|down_0|NZ_CP027513.1_1887_2220_+,NA|80aa|down_2|NZ_CP027513.1_3293_3533_+,NA|65aa|down_3|NZ_CP027513.1_3644_3839_+,NA|252aa|down_7|NZ_CP027513.1_7405_8161_+,NA|87aa|down_8|NZ_CP027513.1_8173_8434_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|111aa|down_0|NZ_CP027513.1_1887_2220_+	NA	NA|114aa|down_1|NZ_CP027513.1_2838_3180_+	pfam17400, DUF5406, Family of unknown function (DUF5406)	NA|80aa|down_2|NZ_CP027513.1_3293_3533_+	NA	NA|65aa|down_3|NZ_CP027513.1_3644_3839_+	NA	NA|224aa|down_4|NZ_CP027513.1_3924_4596_+	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|659aa|down_5|NZ_CP027513.1_4648_6625_+	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain	NA|251aa|down_6|NZ_CP027513.1_6637_7390_+	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|252aa|down_7|NZ_CP027513.1_7405_8161_+	NA	NA|87aa|down_8|NZ_CP027513.1_8173_8434_+	NA	NA|697aa|down_9|NZ_CP027513.1_8430_10521_+	pfam17998, AgI_II_C2, Cell surface antigen I/II C2 terminal domain
GCF_003020725.1_ASM302072v1	NZ_CP027514	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed2, complete sequence	1	509-588	1	CRISPRCasFinder	no			Orphan	AAACCCTTGATAATACTGGAAATGCG	26	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,RT,DEDDh,cas2,DinG,csa3	NA,NA|111aa|down_0|NZ_CP027514.1_1896_2229_+,NA|110aa|down_1|NZ_CP027514.1_2819_3149_+,NA|80aa|down_3|NZ_CP027514.1_3590_3830_+,NA|80aa|down_4|NZ_CP027514.1_3896_4136_+,NA|275aa|down_8|NZ_CP027514.1_7686_8511_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|111aa|down_0|NZ_CP027514.1_1896_2229_+	NA	NA|110aa|down_1|NZ_CP027514.1_2819_3149_+	NA	NA|114aa|down_2|NZ_CP027514.1_3135_3477_+	pfam17400, DUF5406, Family of unknown function (DUF5406)	NA|80aa|down_3|NZ_CP027514.1_3590_3830_+	NA	NA|80aa|down_4|NZ_CP027514.1_3896_4136_+	NA	NA|224aa|down_5|NZ_CP027514.1_4221_4893_+	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|659aa|down_6|NZ_CP027514.1_4945_6922_+	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain	NA|252aa|down_7|NZ_CP027514.1_6934_7690_+	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|275aa|down_8|NZ_CP027514.1_7686_8511_+	NA	NA|704aa|down_9|NZ_CP027514.1_8800_10912_+	TIGR04226, Fimbrial_subunit_type_2, fimbrial isopeptide formation D2 domain
