The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP025219	Listeria monocytogenes strain ATCC 13932 chromosome, complete genome	2950984	130449	136976	2950984	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003728215.1|130449_130902_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|130907_131243_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003724946.1|131459_131888_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003728213.1|131899_132316_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	37.9	3.2e-19
WP_003728212.1|132595_132985_+	DUF5072 domain-containing protein	NA	NA	NA	NA	NA
WP_003721744.1|132997_133510_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|133557_133860_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003740367.1|133901_134306_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003731178.1|134292_136161_+	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_003734720.1|136157_136976_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	7.2e-39
>prophage 2
NZ_CP025219	Listeria monocytogenes strain ATCC 13932 chromosome, complete genome	2950984	1278902	1335755	2950984	protease,tRNA	Bacillus_virus(16.67%)	56	NA	NA
WP_003734523.1|1278902_1280042_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|1280121_1280517_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|1280667_1280883_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003727523.1|1281006_1281540_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003731300.1|1281555_1282221_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060555168.1|1282482_1283421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1283535_1284819_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1285003_1286263_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_060555167.1|1286381_1286948_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003726394.1|1286982_1287552_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003727520.1|1287653_1288196_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003726396.1|1288205_1289069_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003727519.1|1289065_1289851_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	37.6	6.7e-26
WP_003727518.1|1289984_1290845_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_003727517.1|1291117_1293196_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	5.4e-107
WP_003727516.1|1293258_1294563_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_003731303.1|1294845_1295748_+	tyrosine recombinase XerC	NA	A0A142K7N4	Mycobacterium_phage	29.5	1.8e-14
WP_003724001.1|1295768_1296308_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003727514.1|1296321_1297731_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.8	7.5e-44
WP_003726695.1|1297751_1298531_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003727513.1|1298633_1299053_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1299075_1299387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003726697.1|1299389_1300262_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_003726698.1|1300303_1300900_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003727511.1|1301058_1301466_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003727510.1|1301646_1303614_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	5.1e-123
WP_003734522.1|1303610_1306070_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	1.1e-101
WP_003726814.1|1306152_1306620_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_003734521.1|1307247_1309068_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_003734520.1|1309100_1310987_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	32.2	2.9e-43
WP_003726657.1|1311199_1311898_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.9	6.4e-12
WP_003723738.1|1312130_1313807_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_003726658.1|1313933_1314851_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1314972_1315206_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_012681271.1|1315316_1316540_+	GTPase HflX	NA	NA	NA	NA	NA
WP_003727505.1|1316532_1317759_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1317960_1318329_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|1318399_1319734_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_003726564.1|1319877_1321173_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	62.6	2.5e-147
WP_003734519.1|1321206_1321731_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003723438.1|1321761_1322376_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003734518.1|1322532_1322862_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003734517.1|1322955_1323183_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003734516.1|1323329_1325324_+	transketolase	NA	NA	NA	NA	NA
WP_003726667.1|1325544_1325784_+	YneF family protein	NA	NA	NA	NA	NA
WP_003726668.1|1325832_1326564_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	58.0	2.3e-81
WP_003726669.1|1326585_1327092_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	1.4e-56
WP_003727499.1|1327101_1328406_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	52.1	1.2e-133
WP_003744007.1|1328395_1329601_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	46.6	4.1e-91
WP_003734514.1|1329578_1329953_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|1330245_1330974_+	UMP kinase	NA	NA	NA	NA	NA
WP_003723450.1|1330973_1331531_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_003727497.1|1331761_1332520_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_003734513.1|1332533_1333322_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003726414.1|1333336_1334479_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_003734512.1|1334492_1335755_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 3
NZ_CP025219	Listeria monocytogenes strain ATCC 13932 chromosome, complete genome	2950984	1828703	1836989	2950984		Synechococcus_phage(33.33%)	8	NA	NA
WP_003726209.1|1828703_1829270_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.4	8.3e-26
WP_003726210.1|1829266_1830316_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	3.2e-63
WP_003722245.1|1830334_1831762_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_003731570.1|1831746_1833966_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.8	6.5e-159
WP_003734638.1|1833958_1834642_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003722248.1|1834645_1834891_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003734637.1|1834902_1835616_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.3	6.7e-41
WP_003726215.1|1835696_1836989_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
>prophage 4
NZ_CP025219	Listeria monocytogenes strain ATCC 13932 chromosome, complete genome	2950984	2560643	2568488	2950984		Streptococcus_phage(50.0%)	7	NA	NA
WP_003725407.1|2560643_2561615_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003734495.1|2561622_2562591_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.6	1.8e-68
WP_003722606.1|2562592_2563468_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_003734494.1|2563575_2565306_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.3	5.6e-174
WP_003741152.1|2565347_2566409_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_003725411.1|2566425_2567409_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	38.1	4.0e-52
WP_003722610.1|2567528_2568488_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
