assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003061385.1_ASM306138v1	NZ_CP028927	Pasteurella multocida strain 9N chromosome, complete genome	1	362107-364236	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	Type I-F	GTTCACCATCGTGTAGATGGCTTAGAAA,GTTCACCATCGTGTAGATGGCTTAGAAA,GTTCACCATCGTGTAGATGGCTTAGAAA	28,28,28	0	0	NA	NA	NA:NA:NA	35,35,34	35	TypeI-F	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	NA,NA|197aa|down_3|NZ_CP028927.1_370741_371332_+	NA|172aa|up_9|NZ_CP028927.1_348142_348658_+	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ	NA|964aa|up_8|NZ_CP028927.1_348699_351591_+	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|90aa|up_7|NZ_CP028927.1_351758_352028_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|371aa|up_6|NZ_CP028927.1_352165_353278_-	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|683aa|up_5|NZ_CP028927.1_353459_355508_+	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|720aa|up_4|NZ_CP028927.1_355641_357801_+	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	cas8f|445aa|up_3|NZ_CP028927.1_358065_359400_+	cd09675, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|328aa|up_2|NZ_CP028927.1_359409_360393_+	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2	cas7f|336aa|up_1|NZ_CP028927.1_360395_361403_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|187aa|up_0|NZ_CP028927.1_361405_361966_+	TIGR02563, conserved_hypothetical_protein, CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST	cas1|327aa|down_0|NZ_CP028927.1_364405_365386_+	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas3-cas2|1107aa|down_1|NZ_CP028927.1_365366_368687_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	NA|619aa|down_2|NZ_CP028927.1_368744_370601_+	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|197aa|down_3|NZ_CP028927.1_370741_371332_+	NA	NA|268aa|down_4|NZ_CP028927.1_371395_372199_-	PRK10757, PRK10757, inositol-1-monophosphatase	NA|239aa|down_5|NZ_CP028927.1_372412_373129_+	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|155aa|down_6|NZ_CP028927.1_373207_373672_+	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR	NA|405aa|down_7|NZ_CP028927.1_373719_374934_+	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|129aa|down_8|NZ_CP028927.1_375165_375552_+	PRK11325, PRK11325, scaffold protein; Provisional	NA|108aa|down_9|NZ_CP028927.1_375621_375945_+	TIGR02011, Protein_yfhF
GCF_003061385.1_ASM306138v1	NZ_CP028927	Pasteurella multocida strain 9N chromosome, complete genome	2	1321395-1321628	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas9	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	 Type II-B,Type II-B,Type II-A,Type II-C, or Type II-C?	GTTGTAGTTCCCTCTCTCATTTCGCAGTGCTACAAT,GTTGTAGTTCCCTCTCTCATTTCGCAGTGCTACAAT,GTTGTAGTTCCCTCTCTCATTTCGCAGTGCTACAAT	36,36,36	0	0	NA	NA	NA:NA:NA	3,3,3	3	TypeII-B,TypeII-B,TypeII-A,TypeII-C,orTypeII-C?	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	NA|67aa|up_2|NZ_CP028927.1_1319891_1320092_-,NA	NA|715aa|up_9|NZ_CP028927.1_1309049_1311194_-	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|481aa|up_8|NZ_CP028927.1_1311642_1313085_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|263aa|up_7|NZ_CP028927.1_1313837_1314626_+	COG3774, OCH1, Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane]	NA|383aa|up_6|NZ_CP028927.1_1314710_1315859_-	PRK05111, PRK05111, acetylornithine deacetylase; Provisional	NA|336aa|up_5|NZ_CP028927.1_1315966_1316974_+	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|258aa|up_4|NZ_CP028927.1_1316974_1317748_+	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis	NA|458aa|up_3|NZ_CP028927.1_1317763_1319137_+	PRK04833, PRK04833, argininosuccinate lyase; Provisional	NA|67aa|up_2|NZ_CP028927.1_1319891_1320092_-	NA	NA|108aa|up_1|NZ_CP028927.1_1320277_1320601_-	pfam12441, CopG_antitoxin, CopG antitoxin of type II toxin-antitoxin system	NA|95aa|up_0|NZ_CP028927.1_1320665_1320950_-	pfam14076, DUF4258, Domain of unknown function (DUF4258)	cas2|109aa|down_0|NZ_CP028927.1_1321861_1322188_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|305aa|down_1|NZ_CP028927.1_1322180_1323095_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1057aa|down_2|NZ_CP028927.1_1323150_1326321_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|98aa|down_3|NZ_CP028927.1_1326545_1326839_-	pfam17347, DUF5377, Family of unknown function (DUF5377)	NA|94aa|down_4|NZ_CP028927.1_1326843_1327125_-	COG3036, COG3036, Uncharacterized protein conserved in bacteria [Function unknown]	NA|117aa|down_5|NZ_CP028927.1_1327197_1327548_-	TIGR00014, Putative_arsenate_reductase	NA|355aa|down_6|NZ_CP028927.1_1327627_1328692_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|1033aa|down_7|NZ_CP028927.1_1328749_1331848_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|148aa|down_8|NZ_CP028927.1_1331857_1332301_-	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|404aa|down_9|NZ_CP028927.1_1332328_1333540_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit
GCF_003061385.1_ASM306138v1	NZ_CP028927	Pasteurella multocida strain 9N chromosome, complete genome	3	2050456-2050551	3	CRISPRCasFinder	no		DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	Orphan	GAATTTTGCGAGTCCATAAAAAAGG	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	NA|207aa|up_5|NZ_CP028927.1_2047438_2048059_+,NA|141aa|up_3|NZ_CP028927.1_2048447_2048870_+,NA|93aa|up_1|NZ_CP028927.1_2049602_2049881_+,NA|92aa|up_0|NZ_CP028927.1_2050072_2050348_+,NA|137aa|down_1|NZ_CP028927.1_2051379_2051790_+,NA|109aa|down_2|NZ_CP028927.1_2051782_2052109_+,NA|145aa|down_3|NZ_CP028927.1_2052105_2052540_+	NA|311aa|up_9|NZ_CP028927.1_2041457_2042390_+	cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases	NA|461aa|up_8|NZ_CP028927.1_2042425_2043808_-	PRK04311, PRK04311, selenocysteine synthase; Provisional	NA|418aa|up_7|NZ_CP028927.1_2044370_2045624_+	PRK09692, PRK09692, integrase; Provisional	NA|383aa|up_6|NZ_CP028927.1_2045795_2046944_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|207aa|up_5|NZ_CP028927.1_2047438_2048059_+	NA	NA|66aa|up_4|NZ_CP028927.1_2048240_2048438_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|141aa|up_3|NZ_CP028927.1_2048447_2048870_+	NA	NA|240aa|up_2|NZ_CP028927.1_2048890_2049610_+	COG3646, COG3646, Uncharacterized phage-encoded protein [Function unknown]	NA|93aa|up_1|NZ_CP028927.1_2049602_2049881_+	NA	NA|92aa|up_0|NZ_CP028927.1_2050072_2050348_+	NA	NA|187aa|down_0|NZ_CP028927.1_2050826_2051387_+	pfam10554, Phage_ASH, Ash protein family	NA|137aa|down_1|NZ_CP028927.1_2051379_2051790_+	NA	NA|109aa|down_2|NZ_CP028927.1_2051782_2052109_+	NA	NA|145aa|down_3|NZ_CP028927.1_2052105_2052540_+	NA	NA|726aa|down_4|NZ_CP028927.1_2052532_2054710_+	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair]	NA|317aa|down_5|NZ_CP028927.1_2055793_2056744_+	COG4823, AbiF, Abortive infection bacteriophage resistance protein [Defense mechanisms]	NA|462aa|down_6|NZ_CP028927.1_2057267_2058653_-	PRK10504, PRK10504, putative transporter; Provisional	NA|170aa|down_7|NZ_CP028927.1_2058662_2059172_-	PRK10751, PRK10751, molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional	NA|144aa|down_8|NZ_CP028927.1_2059222_2059654_-	COG3086, RseC, Positive regulator of sigma E activity [Signal transduction mechanisms]	NA|322aa|down_9|NZ_CP028927.1_2059662_2060628_-	PRK09455, rseB, anti-sigma E factor; Provisional
GCF_003061385.1_ASM306138v1	NZ_CP028927	Pasteurella multocida strain 9N chromosome, complete genome	4	2128875-2130706	3,4,3	PILER-CR,CRISPRCasFinder,CRT	no	cas3	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	Unclear	GTTAACTGCCGTATAGGCAGCTTAGAAA,GTTAACTGCCGTATAGGCAGCTTAGAAA,GTTAACTGCCGTATAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	29,30,30	30	Unclear	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	NA,NA	NA|373aa|up_9|NZ_CP028927.1_2117473_2118592_-	pfam03702, AnmK, Anhydro-N-acetylmuramic acid kinase	NA|223aa|up_8|NZ_CP028927.1_2118733_2119402_-	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|456aa|up_7|NZ_CP028927.1_2119442_2120810_-	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|143aa|up_6|NZ_CP028927.1_2120833_2121262_-	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|190aa|up_5|NZ_CP028927.1_2121267_2121837_-	pfam04220, YihI, Der GTPase activator (YihI)	NA|220aa|up_4|NZ_CP028927.1_2121900_2122560_-	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|968aa|up_3|NZ_CP028927.1_2122640_2125544_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|235aa|up_2|NZ_CP028927.1_2125821_2126526_+	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism]	NA|238aa|up_1|NZ_CP028927.1_2126573_2127287_-	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	cas3|443aa|up_0|NZ_CP028927.1_2127398_2128727_+	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|322aa|down_0|NZ_CP028927.1_2130968_2131934_-	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	NA|349aa|down_1|NZ_CP028927.1_2131930_2132977_-	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF	NA|137aa|down_2|NZ_CP028927.1_2133042_2133453_-	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and    metabolism]	NA|475aa|down_3|NZ_CP028927.1_2133568_2134993_-	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|340aa|down_4|NZ_CP028927.1_2135221_2136241_-	TIGR02417, Fructose_repressor_Catabolite_repressor/activator	NA|481aa|down_5|NZ_CP028927.1_2136266_2137709_-	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|309aa|down_6|NZ_CP028927.1_2137746_2138673_-	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional	NA|204aa|down_7|NZ_CP028927.1_2138858_2139470_+	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only]	NA|456aa|down_8|NZ_CP028927.1_2139497_2140865_+	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|529aa|down_9|NZ_CP028927.1_2141223_2142810_+	COG1620, LldP, L-lactate permease [Energy production and conversion]
GCF_003061385.1_ASM306138v1	NZ_CP028927	Pasteurella multocida strain 9N chromosome, complete genome	5	2130830-2130917	5	CRISPRCasFinder	no	cas3	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	Unclear	GTTAACTGCCGTATAGGCAGCTTAGAAA	28	0	0	NA	NA	I-F	1	1	Unclear	DEDDh,cas8f,cas5f,cas7f,cas6f,cas1,cas3-cas2,DinG,cas3,cas2,cas9,csa3	NA,NA	NA|373aa|up_9|NZ_CP028927.1_2117473_2118592_-	pfam03702, AnmK, Anhydro-N-acetylmuramic acid kinase	NA|223aa|up_8|NZ_CP028927.1_2118733_2119402_-	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|456aa|up_7|NZ_CP028927.1_2119442_2120810_-	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|143aa|up_6|NZ_CP028927.1_2120833_2121262_-	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|190aa|up_5|NZ_CP028927.1_2121267_2121837_-	pfam04220, YihI, Der GTPase activator (YihI)	NA|220aa|up_4|NZ_CP028927.1_2121900_2122560_-	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|968aa|up_3|NZ_CP028927.1_2122640_2125544_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|235aa|up_2|NZ_CP028927.1_2125821_2126526_+	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism]	NA|238aa|up_1|NZ_CP028927.1_2126573_2127287_-	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	cas3|443aa|up_0|NZ_CP028927.1_2127398_2128727_+	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|322aa|down_0|NZ_CP028927.1_2130968_2131934_-	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	NA|349aa|down_1|NZ_CP028927.1_2131930_2132977_-	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF	NA|137aa|down_2|NZ_CP028927.1_2133042_2133453_-	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and    metabolism]	NA|475aa|down_3|NZ_CP028927.1_2133568_2134993_-	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|340aa|down_4|NZ_CP028927.1_2135221_2136241_-	TIGR02417, Fructose_repressor_Catabolite_repressor/activator	NA|481aa|down_5|NZ_CP028927.1_2136266_2137709_-	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|309aa|down_6|NZ_CP028927.1_2137746_2138673_-	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional	NA|204aa|down_7|NZ_CP028927.1_2138858_2139470_+	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only]	NA|456aa|down_8|NZ_CP028927.1_2139497_2140865_+	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|529aa|down_9|NZ_CP028927.1_2141223_2142810_+	COG1620, LldP, L-lactate permease [Energy production and conversion]
