assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003073695.1_ASM307369v1	NZ_CP029093	Pseudomonas aeruginosa strain AR441 chromosome, complete genome	1	368823-368936	1	CRISPRCasFinder	no		csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK	Orphan	GGCTAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK,cas1,csf3gr5,csf2gr7,c2c9_V-U4	NA,NA|169aa|down_2|NZ_CP029093.1_373513_374020_-,NA|251aa|down_5|NZ_CP029093.1_375773_376526_-,NA|185aa|down_7|NZ_CP029093.1_377287_377842_-	NA|293aa|up_9|NZ_CP029093.1_355670_356549_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|212aa|up_8|NZ_CP029093.1_356740_357376_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|NZ_CP029093.1_357436_358498_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|NZ_CP029093.1_358753_360130_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|NZ_CP029093.1_360407_361160_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|NZ_CP029093.1_361200_362559_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|NZ_CP029093.1_362624_363995_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|NZ_CP029093.1_364110_365214_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|NZ_CP029093.1_365633_366731_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|NZ_CP029093.1_366787_367942_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|NZ_CP029093.1_369984_372372_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|NZ_CP029093.1_372482_373535_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|169aa|down_2|NZ_CP029093.1_373513_374020_-	NA	NA|204aa|down_3|NZ_CP029093.1_374124_374736_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_4|NZ_CP029093.1_374734_375754_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_5|NZ_CP029093.1_375773_376526_-	NA	NA|233aa|down_6|NZ_CP029093.1_376574_377273_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_7|NZ_CP029093.1_377287_377842_-	NA	NA|165aa|down_8|NZ_CP029093.1_378106_378601_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|231aa|down_9|NZ_CP029093.1_378605_379298_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_003073695.1_ASM307369v1	NZ_CP029093	Pseudomonas aeruginosa strain AR441 chromosome, complete genome	2	565008-565112	2	CRISPRCasFinder	no		csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK	Orphan	GGCGCGGGGCAGGCAATCGAGACTGGC	27	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK,cas1,csf3gr5,csf2gr7,c2c9_V-U4	NA|101aa|up_9|NZ_CP029093.1_554287_554590_+,NA	NA|101aa|up_9|NZ_CP029093.1_554287_554590_+	NA	NA|207aa|up_8|NZ_CP029093.1_554733_555354_-	cd03205, GST_C_6, C-terminal, alpha helical domain of an unknown subfamily 6 of Glutathione S-transferases	NA|317aa|up_7|NZ_CP029093.1_555372_556323_-	COG4257, Vgb, Streptogramin lyase [Defense mechanisms]	NA|286aa|up_6|NZ_CP029093.1_556408_557266_+	pfam13672, PP2C_2, Protein phosphatase 2C	NA|803aa|up_5|NZ_CP029093.1_557434_559843_-	PRK10044, PRK10044, ferrichrome outer membrane transporter; Provisional	NA|324aa|up_4|NZ_CP029093.1_559944_560916_-	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]	NA|173aa|up_3|NZ_CP029093.1_560912_561431_-	PRK12523, PRK12523, RNA polymerase sigma factor; Reviewed	NA|250aa|up_2|NZ_CP029093.1_561599_562349_+	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|134aa|up_1|NZ_CP029093.1_562488_562890_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|190aa|up_0|NZ_CP029093.1_562939_563509_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|309aa|down_0|NZ_CP029093.1_565609_566536_-	cd08468, PBP2_Pa0477, The C-terminal substrate biniding domain of an uncharacterized LysR-like transcriptional regulator Pa0477 related to DntR, contains the type 2 periplasmic binding fold	NA|159aa|down_1|NZ_CP029093.1_566623_567100_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|726aa|down_2|NZ_CP029093.1_567366_569544_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|148aa|down_3|NZ_CP029093.1_569850_570294_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|172aa|down_4|NZ_CP029093.1_570325_570841_+	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism]	NA|299aa|down_5|NZ_CP029093.1_571529_572426_-	COG2962, RarD, Predicted permeases [General function prediction only]	NA|325aa|down_6|NZ_CP029093.1_572636_573611_-	PRK11768, PRK11768, serine/threonine protein kinase	NA|253aa|down_7|NZ_CP029093.1_573672_574431_-	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional	NA|107aa|down_8|NZ_CP029093.1_574498_574819_-	PRK10759, PRK10759, YfiM family lipoprotein	NA|242aa|down_9|NZ_CP029093.1_574860_575586_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]
GCF_003073695.1_ASM307369v1	NZ_CP029093	Pseudomonas aeruginosa strain AR441 chromosome, complete genome	3	1124193-1124762	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no		csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK	Orphan	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	8,9,9	9	Orphan	csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK,cas1,csf3gr5,csf2gr7,c2c9_V-U4	NA|105aa|up_0|NZ_CP029093.1_1123606_1123921_+,NA	NA|464aa|up_9|NZ_CP029093.1_1115666_1117058_+	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General    function prediction only]	NA|161aa|up_8|NZ_CP029093.1_1117323_1117806_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|84aa|up_7|NZ_CP029093.1_1117802_1118054_+	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism]	NA|151aa|up_6|NZ_CP029093.1_1118058_1118511_+	PRK10678, moaE, molybdopterin synthase catalytic subunit MoaE	NA|186aa|up_5|NZ_CP029093.1_1118612_1119170_+	TIGR02667, Molybdenum_cofactor_biosynthesis_protein_B	NA|408aa|up_4|NZ_CP029093.1_1119166_1120390_+	cd00887, MoeA, MoeA family	NA|332aa|up_3|NZ_CP029093.1_1120504_1121500_+	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|297aa|up_2|NZ_CP029093.1_1121511_1122402_+	PRK15447, PRK15447, putative protease; Provisional	NA|168aa|up_1|NZ_CP029093.1_1122395_1122899_+	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism]	NA|105aa|up_0|NZ_CP029093.1_1123606_1123921_+	NA	NA|521aa|down_0|NZ_CP029093.1_1125425_1126988_+	COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]	NA|781aa|down_1|NZ_CP029093.1_1127024_1129367_+	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only]	NA|528aa|down_2|NZ_CP029093.1_1129535_1131119_-	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|154aa|down_3|NZ_CP029093.1_1131343_1131805_+	pfam08816, Ivy, Inhibitor of vertebrate lysozyme (Ivy)	NA|785aa|down_4|NZ_CP029093.1_1131926_1134281_-	COG4772, FecA, Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]	NA|318aa|down_5|NZ_CP029093.1_1134374_1135328_-	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]	NA|170aa|down_6|NZ_CP029093.1_1135324_1135834_-	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|294aa|down_7|NZ_CP029093.1_1135934_1136816_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|301aa|down_8|NZ_CP029093.1_1136941_1137844_+	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional	NA|326aa|down_9|NZ_CP029093.1_1137863_1138841_-	cd05301, GDH, D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH)
GCF_003073695.1_ASM307369v1	NZ_CP029093	Pseudomonas aeruginosa strain AR441 chromosome, complete genome	4	2888679-2889006	2,4,2	PILER-CR,CRISPRCasFinder,CRT	no	cas6f	csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK	Unclear	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	5,5,5	5	Unclear	csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK,cas1,csf3gr5,csf2gr7,c2c9_V-U4	NA|82aa|up_6|NZ_CP029093.1_2868024_2868270_-,NA	NA|725aa|up_9|NZ_CP029093.1_2864606_2866781_+	pfam04632, FUSC, Fusaric acid resistance protein family	NA|70aa|up_8|NZ_CP029093.1_2866770_2866980_+	pfam07869, DUF1656, Protein of unknown function (DUF1656)	NA|335aa|up_7|NZ_CP029093.1_2866976_2867981_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|82aa|up_6|NZ_CP029093.1_2868024_2868270_-	NA	NA|305aa|up_5|NZ_CP029093.1_2868530_2869445_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|338aa|up_4|NZ_CP029093.1_2869600_2870614_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|188aa|up_3|NZ_CP029093.1_2870691_2871255_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_2|NZ_CP029093.1_2871888_2872653_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|243aa|up_1|NZ_CP029093.1_2886949_2887678_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|171aa|up_0|NZ_CP029093.1_2887769_2888282_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|168aa|down_0|NZ_CP029093.1_2889179_2889683_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|307aa|down_1|NZ_CP029093.1_2890859_2891780_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|473aa|down_2|NZ_CP029093.1_2891814_2893233_-	pfam03573, OprD, outer membrane porin, OprD family	NA|227aa|down_3|NZ_CP029093.1_2893312_2893993_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|287aa|down_4|NZ_CP029093.1_2894081_2894942_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|323aa|down_5|NZ_CP029093.1_2895042_2896011_+	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional	NA|564aa|down_6|NZ_CP029093.1_2896014_2897706_-	PRK13272, treA, alpha,alpha-trehalase TreA	NA|142aa|down_7|NZ_CP029093.1_2898057_2898483_+	COG4244, COG4244, Predicted membrane protein [Function unknown]	NA|440aa|down_8|NZ_CP029093.1_2898475_2899795_+	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]	NA|470aa|down_9|NZ_CP029093.1_2899978_2901388_+	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
GCF_003073695.1_ASM307369v1	NZ_CP029093	Pseudomonas aeruginosa strain AR441 chromosome, complete genome	5	5297794-5297894	5	CRISPRCasFinder	no		csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK	Orphan	GGGTACAGAAACTGTACCCATGGAG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK,cas1,csf3gr5,csf2gr7,c2c9_V-U4	NA|181aa|up_5|NZ_CP029093.1_5294827_5295370_-,NA|139aa|up_3|NZ_CP029093.1_5295710_5296127_+,NA|78aa|up_2|NZ_CP029093.1_5296119_5296353_+,NA|83aa|up_1|NZ_CP029093.1_5296349_5296598_+,NA|102aa|up_0|NZ_CP029093.1_5296594_5296900_+,NA|99aa|down_0|NZ_CP029093.1_5298976_5299273_+,NA|71aa|down_2|NZ_CP029093.1_5299614_5299827_+,NA|81aa|down_4|NZ_CP029093.1_5302940_5303183_+,NA|61aa|down_5|NZ_CP029093.1_5303474_5303657_+,NA|251aa|down_6|NZ_CP029093.1_5303776_5304529_-,NA|647aa|down_7|NZ_CP029093.1_5304525_5306466_-	NA|189aa|up_9|NZ_CP029093.1_5289290_5289857_-	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|750aa|up_8|NZ_CP029093.1_5290006_5292256_-	pfam07793, DUF1631, Protein of unknown function (DUF1631)	NA|283aa|up_7|NZ_CP029093.1_5292541_5293390_+	PRK05742, PRK05742, carboxylating nicotinate-nucleotide diphosphorylase	NA|405aa|up_6|NZ_CP029093.1_5293611_5294826_+	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|181aa|up_5|NZ_CP029093.1_5294827_5295370_-	NA	NA|67aa|up_4|NZ_CP029093.1_5295513_5295714_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|139aa|up_3|NZ_CP029093.1_5295710_5296127_+	NA	NA|78aa|up_2|NZ_CP029093.1_5296119_5296353_+	NA	NA|83aa|up_1|NZ_CP029093.1_5296349_5296598_+	NA	NA|102aa|up_0|NZ_CP029093.1_5296594_5296900_+	NA	NA|99aa|down_0|NZ_CP029093.1_5298976_5299273_+	NA	NA|77aa|down_1|NZ_CP029093.1_5299269_5299500_+	TIGR03453, partition_RepA, plasmid partitioning protein RepA	NA|71aa|down_2|NZ_CP029093.1_5299614_5299827_+	NA	NA|614aa|down_3|NZ_CP029093.1_5299829_5301671_+	cd07016, S14_ClpP_1, Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease	NA|81aa|down_4|NZ_CP029093.1_5302940_5303183_+	NA	NA|61aa|down_5|NZ_CP029093.1_5303474_5303657_+	NA	NA|251aa|down_6|NZ_CP029093.1_5303776_5304529_-	NA	NA|647aa|down_7|NZ_CP029093.1_5304525_5306466_-	NA	NA|156aa|down_8|NZ_CP029093.1_5306530_5306998_-	COG4969, PilA, Tfp pilus assembly protein, major pilin PilA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|568aa|down_9|NZ_CP029093.1_5307220_5308924_+	TIGR02538, Type_IV_pilus_assembly_protein_PilF, type IV-A pilus assembly ATPase PilB
GCF_003073695.1_ASM307369v1	NZ_CP029093	Pseudomonas aeruginosa strain AR441 chromosome, complete genome	6	6219439-6220022	3	CRT	no		csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK	Orphan	GCNGNCTTNGCCGCCGGTTTCGCGGCAGGCTTCGCCGCNGGCTT	44	3	7	6219483-6219501|6219483-6219501|6219483-6219501|6219897-6219915|6219960-6219978|6219960-6219978|6219960-6219978	NZ_CP029093.1_4925371-4925389|NZ_CP029093.1_6106446-6106428|NZ_CP029093.1_6519876-6519858|NZ_CP029093.1_4446210-4446192|NZ_CP029093.1_1872875-1872893|NZ_CP029093.1_5985666-5985684|NZ_CP029093.1_6519876-6519858	NA	8	8	Orphan	csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK,cas1,csf3gr5,csf2gr7,c2c9_V-U4	NA,NA	NA|197aa|up_9|NZ_CP029093.1_6210164_6210755_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|223aa|up_8|NZ_CP029093.1_6210922_6211591_+	PRK11780, PRK11780, isoprenoid biosynthesis glyoxalase ElbB	NA|158aa|up_7|NZ_CP029093.1_6211685_6212159_+	PRK11688, PRK11688, thioesterase family protein	NA|161aa|up_6|NZ_CP029093.1_6212143_6212626_-	COG1671, COG1671, Uncharacterized protein conserved in bacteria [Function unknown]	NA|634aa|up_5|NZ_CP029093.1_6212692_6214594_-	COG0672, FTR1, High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism]	NA|210aa|up_4|NZ_CP029093.1_6214700_6215330_-	PRK10520, rhtB, homoserine/homoserine lactone efflux protein; Provisional	NA|253aa|up_3|NZ_CP029093.1_6215539_6216298_-	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]	NA|193aa|up_2|NZ_CP029093.1_6216304_6216883_-	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|639aa|up_1|NZ_CP029093.1_6216882_6218799_-	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional	NA|160aa|up_0|NZ_CP029093.1_6218844_6219324_+	pfam09523, DUF2390, Protein of unknown function (DUF2390)	NA|210aa|down_0|NZ_CP029093.1_6220540_6221170_+	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_1|NZ_CP029093.1_6221229_6221712_-	PRK11718, PRK11718, sigma D regulator	NA|164aa|down_2|NZ_CP029093.1_6221974_6222466_-	PRK04388, PRK04388, disulfide bond formation protein B; Provisional	NA|413aa|down_3|NZ_CP029093.1_6222643_6223882_-	COG3071, HemY, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]	NA|376aa|down_4|NZ_CP029093.1_6223878_6225006_-	COG2959, HemX, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]	NA|252aa|down_5|NZ_CP029093.1_6225032_6225788_-	PRK05752, PRK05752, uroporphyrinogen-III synthase; Validated	NA|314aa|down_6|NZ_CP029093.1_6225784_6226726_-	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|249aa|down_7|NZ_CP029093.1_6226834_6227581_-	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|359aa|down_8|NZ_CP029093.1_6227585_6228662_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|465aa|down_9|NZ_CP029093.1_6228886_6230281_+	PRK00855, PRK00855, argininosuccinate lyase; Provisional
GCF_003073695.1_ASM307369v1	NZ_CP029093	Pseudomonas aeruginosa strain AR441 chromosome, complete genome	7	6252582-6252732	3	PILER-CR	no		csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK	Orphan	TGGTTCACTGCCGTGTAGGCAGCTAAGAAAAGCA	34	0	0	NA	NA	I-F	2	2	Orphan	csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK,cas1,csf3gr5,csf2gr7,c2c9_V-U4	NA,NA|105aa|down_0|NZ_CP029093.1_6253001_6253316_-,NA|61aa|down_3|NZ_CP029093.1_6261353_6261536_-	NA|233aa|up_9|NZ_CP029093.1_6241812_6242511_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|390aa|up_8|NZ_CP029093.1_6242588_6243758_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|462aa|up_7|NZ_CP029093.1_6243897_6245283_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|106aa|up_6|NZ_CP029093.1_6245346_6245664_-	PLN03142, PLN03142, Probable chromatin-remodeling complex ATPase chain; Provisional	NA|142aa|up_5|NZ_CP029093.1_6245741_6246167_-	COG0432, COG0432, Uncharacterized conserved protein [Function unknown]	NA|443aa|up_4|NZ_CP029093.1_6246394_6247723_-	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism]	NA|113aa|up_3|NZ_CP029093.1_6247763_6248102_-	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|87aa|up_2|NZ_CP029093.1_6248541_6248802_+	COG2960, COG2960, Uncharacterized protein conserved in bacteria [Function unknown]	NA|498aa|up_1|NZ_CP029093.1_6248845_6250339_+	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|662aa|up_0|NZ_CP029093.1_6250464_6252450_+	PRK09928, PRK09928, choline transport protein BetT; Provisional	NA|105aa|down_0|NZ_CP029093.1_6253001_6253316_-	NA	NA|663aa|down_1|NZ_CP029093.1_6257831_6259820_+	PRK09928, PRK09928, choline transport protein BetT; Provisional	NA|350aa|down_2|NZ_CP029093.1_6259860_6260910_-	cd04309, HAD_PSP_eu, phosphoserine phosphatase eukaryotic-like, similar to human phosphoserine phosphatase	NA|61aa|down_3|NZ_CP029093.1_6261353_6261536_-	NA	NA|164aa|down_4|NZ_CP029093.1_6261888_6262380_+	pfam00419, Fimbrial, Fimbrial protein	NA|312aa|down_5|NZ_CP029093.1_6262723_6263659_+	PRK09934, PRK09934, fimbriae assembly protein	NA|308aa|down_6|NZ_CP029093.1_6263663_6264587_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|558aa|down_7|NZ_CP029093.1_6266110_6267784_-	cd01948, EAL, EAL domain	NA|670aa|down_8|NZ_CP029093.1_6267971_6269981_+	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep	NA|573aa|down_9|NZ_CP029093.1_6270113_6271832_+	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase
GCF_003073695.1_ASM307369v1	NZ_CP029091	Pseudomonas aeruginosa strain AR441 plasmid unnamed1, complete sequence	1	68798-69546	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas1,csf3gr5,DinG,cas6f,csf2gr7	cas1,csf3gr5,DinG,cas6f,csf2gr7,c2c9_V-U4	Type IV-A	ACTTCAAGCCACCTACACGGCGGCACAC,CTTCAAGCCNCCTACACGGCGGCACAC,CTTCAAGCCACCTACACGGCGGCACAC	28,27,27	0	0	NA	NA	NA:NA:NA	12,12,7	12	TypeIV-A	csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK,cas1,csf3gr5,csf2gr7,c2c9_V-U4	NA|197aa|up_8|NZ_CP029091.1_59853_60444_-,NA|87aa|up_7|NZ_CP029091.1_61895_62156_-,NA|257aa|up_5|NZ_CP029091.1_63785_64556_-,NA|128aa|up_4|NZ_CP029091.1_64623_65007_-,NA|66aa|up_3|NZ_CP029091.1_65733_65931_-,NA|85aa|up_2|NZ_CP029091.1_65967_66222_-,NA|571aa|up_1|NZ_CP029091.1_66221_67934_-,NA|113aa|up_0|NZ_CP029091.1_68344_68683_+,NA|68aa|down_0|NZ_CP029091.1_69569_69773_-,NA|223aa|down_6|NZ_CP029091.1_75383_76052_+,NA|114aa|down_7|NZ_CP029091.1_76141_76483_-,NA|91aa|down_8|NZ_CP029091.1_76492_76765_-	NA|338aa|up_9|NZ_CP029091.1_58847_59861_-	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|197aa|up_8|NZ_CP029091.1_59853_60444_-	NA	NA|87aa|up_7|NZ_CP029091.1_61895_62156_-	NA	NA|415aa|up_6|NZ_CP029091.1_62517_63762_-	pfam06666, DUF1173, Protein of unknown function (DUF1173)	NA|257aa|up_5|NZ_CP029091.1_63785_64556_-	NA	NA|128aa|up_4|NZ_CP029091.1_64623_65007_-	NA	NA|66aa|up_3|NZ_CP029091.1_65733_65931_-	NA	NA|85aa|up_2|NZ_CP029091.1_65967_66222_-	NA	NA|571aa|up_1|NZ_CP029091.1_66221_67934_-	NA	NA|113aa|up_0|NZ_CP029091.1_68344_68683_+	NA	NA|68aa|down_0|NZ_CP029091.1_69569_69773_-	NA	cas1|279aa|down_1|NZ_CP029091.1_69885_70722_-	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	csf3gr5|227aa|down_2|NZ_CP029091.1_70759_71440_-	cd09707, Csf3_U, CRISPR/Cas system-associated RAMP superfamily protein Csf3	DinG|738aa|down_3|NZ_CP029091.1_71439_73653_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	cas6f|185aa|down_4|NZ_CP029091.1_73666_74221_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	csf2gr7|367aa|down_5|NZ_CP029091.1_74208_75309_-	TIGR03115, cas7_csf2, CRISPR type IV/AFERR-associated protein Csf2	NA|223aa|down_6|NZ_CP029091.1_75383_76052_+	NA	NA|114aa|down_7|NZ_CP029091.1_76141_76483_-	NA	NA|91aa|down_8|NZ_CP029091.1_76492_76765_-	NA	NA|587aa|down_9|NZ_CP029091.1_76935_78696_+	TIGR03734, PRTRC_parB, PRTRC system ParB family protein
GCF_003073695.1_ASM307369v1	NZ_CP029092	Pseudomonas aeruginosa strain AR441 plasmid unnamed2, complete sequence	1	41852-42009	1	CRISPRCasFinder	no	DEDDh	DEDDh	Unclear	CGGTCCCTGGAGTGACGAATTGCG	24	1	1	41922-41942	NZ_CP029092.1_42101-42121	NA	3	3	Orphan	csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK,cas1,csf3gr5,csf2gr7,c2c9_V-U4	NA|87aa|up_8|NZ_CP029092.1_37172_37433_-,NA|103aa|up_7|NZ_CP029092.1_37444_37753_-,NA|179aa|up_5|NZ_CP029092.1_38570_39107_-,NA|69aa|up_1|NZ_CP029092.1_40553_40760_-,NA|114aa|down_2|NZ_CP029092.1_43901_44243_-,NA|87aa|down_3|NZ_CP029092.1_44411_44672_-,NA|106aa|down_5|NZ_CP029092.1_45774_46092_-,NA|123aa|down_6|NZ_CP029092.1_46121_46490_-,NA|58aa|down_7|NZ_CP029092.1_47114_47288_-,NA|139aa|down_9|NZ_CP029092.1_47964_48381_-	NA|279aa|up_9|NZ_CP029092.1_35655_36492_-	pfam06067, DUF932, Domain of unknown function (DUF932)	NA|87aa|up_8|NZ_CP029092.1_37172_37433_-	NA	NA|103aa|up_7|NZ_CP029092.1_37444_37753_-	NA	DEDDh|271aa|up_6|NZ_CP029092.1_37742_38555_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|179aa|up_5|NZ_CP029092.1_38570_39107_-	NA	NA|146aa|up_4|NZ_CP029092.1_39113_39551_-	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins	NA|79aa|up_3|NZ_CP029092.1_39547_39784_-	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown]	NA|142aa|up_2|NZ_CP029092.1_39793_40219_-	pfam02643, DUF192, Uncharacterized ACR, COG1430	NA|69aa|up_1|NZ_CP029092.1_40553_40760_-	NA	NA|217aa|up_0|NZ_CP029092.1_40886_41537_-	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term	NA|385aa|down_0|NZ_CP029092.1_42128_43283_-	pfam10134, RPA, Replication initiator protein A	NA|206aa|down_1|NZ_CP029092.1_43269_43887_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|114aa|down_2|NZ_CP029092.1_43901_44243_-	NA	NA|87aa|down_3|NZ_CP029092.1_44411_44672_-	NA	NA|363aa|down_4|NZ_CP029092.1_44682_45771_-	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|106aa|down_5|NZ_CP029092.1_45774_46092_-	NA	NA|123aa|down_6|NZ_CP029092.1_46121_46490_-	NA	NA|58aa|down_7|NZ_CP029092.1_47114_47288_-	NA	NA|104aa|down_8|NZ_CP029092.1_47648_47960_-	pfam07424, TrbM, TrbM	NA|139aa|down_9|NZ_CP029092.1_47964_48381_-	NA
GCF_003073695.1_ASM307369v1	NZ_CP029094	Pseudomonas aeruginosa strain AR441 plasmid unnamed3, complete sequence	1	46607-46697	1	CRISPRCasFinder	no		RT,DEDDh	Orphan	ACTCCAGTTTCGCATGCTAAACCGG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,DEDDh,cas3,cas6f,DinG,WYL,PD-DExK,cas1,csf3gr5,csf2gr7,c2c9_V-U4	NA|46aa|up_9|NZ_CP029094.1_33932_34070_-,NA|214aa|up_4|NZ_CP029094.1_39438_40080_-,NA|101aa|down_2|NZ_CP029094.1_51712_52015_-,NA|182aa|down_4|NZ_CP029094.1_53123_53669_-,NA|154aa|down_5|NZ_CP029094.1_53787_54249_+,NA|118aa|down_6|NZ_CP029094.1_54215_54569_-,NA|267aa|down_9|NZ_CP029094.1_57435_58236_-	NA|46aa|up_9|NZ_CP029094.1_33932_34070_-	NA	NA|400aa|up_8|NZ_CP029094.1_34681_35881_-	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein	NA|300aa|up_7|NZ_CP029094.1_35880_36780_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|481aa|up_6|NZ_CP029094.1_36954_38397_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|287aa|up_5|NZ_CP029094.1_38516_39377_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|214aa|up_4|NZ_CP029094.1_39438_40080_-	NA	NA|129aa|up_3|NZ_CP029094.1_40221_40608_+	pfam00072, Response_reg, Response regulator receiver domain	NA|163aa|up_2|NZ_CP029094.1_40597_41086_+	smart00260, CheW, Two component signalling adaptor domain	NA|675aa|up_1|NZ_CP029094.1_41082_43107_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|264aa|up_0|NZ_CP029094.1_43103_43895_+	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]	NA|311aa|down_0|NZ_CP029094.1_49659_50592_+	pfam01339, CheB_methylest, CheB methylesterase	NA|346aa|down_1|NZ_CP029094.1_50637_51675_-	PRK09354, recA, recombinase A; Provisional	NA|101aa|down_2|NZ_CP029094.1_51712_52015_-	NA	NA|321aa|down_3|NZ_CP029094.1_52077_53040_-	pfam06834, TraU, TraU protein	NA|182aa|down_4|NZ_CP029094.1_53123_53669_-	NA	NA|154aa|down_5|NZ_CP029094.1_53787_54249_+	NA	NA|118aa|down_6|NZ_CP029094.1_54215_54569_-	NA	NA|523aa|down_7|NZ_CP029094.1_54565_56134_-	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription]	NA|369aa|down_8|NZ_CP029094.1_56158_57265_-	cd00140, beta_clamp, Beta clamp domain	NA|267aa|down_9|NZ_CP029094.1_57435_58236_-	NA
