assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003076315.1_ASM307631v1	NZ_CP029004	Trueperella pyogenes strain TP-2849 chromosome, complete genome	1	854691-857952	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas4,WYL,DEDDh,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3	Type I-E	GGCTCATCCCCGCCTGCGCGGGGACCAC,GGCTCATCCCCGCCTGCGCGGGGACCAC,GGCTCATCCCCGCCTGCGCGGGGACCAC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	53,53,52	53	TypeI-E	cas4,WYL,DEDDh,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3	NA,NA	NA|911aa|up_9|NZ_CP029004.1_841819_844552_-	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|434aa|up_8|NZ_CP029004.1_845653_846955_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|425aa|up_7|NZ_CP029004.1_847039_848314_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|299aa|up_6|NZ_CP029004.1_848316_849213_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|292aa|up_5|NZ_CP029004.1_849221_850097_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|566aa|up_4|NZ_CP029004.1_850150_851848_+	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	NA|205aa|up_3|NZ_CP029004.1_852113_852728_+	pfam01381, HTH_3, Helix-turn-helix	NA|288aa|up_2|NZ_CP029004.1_852981_853845_+	pfam07751, Abi_2, Abi-like protein	NA|68aa|up_1|NZ_CP029004.1_853992_854196_+	pfam03693, ParD_antitoxin, Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH	NA|99aa|up_0|NZ_CP029004.1_854223_854520_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	cas2|115aa|down_0|NZ_CP029004.1_858126_858471_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|311aa|down_1|NZ_CP029004.1_858475_859408_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|223aa|down_2|NZ_CP029004.1_859410_860079_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|235aa|down_3|NZ_CP029004.1_860078_860783_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|381aa|down_4|NZ_CP029004.1_860786_861929_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|215aa|down_5|NZ_CP029004.1_861938_862583_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|566aa|down_6|NZ_CP029004.1_862609_864307_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|952aa|down_7|NZ_CP029004.1_864590_867446_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|90aa|down_8|NZ_CP029004.1_867897_868167_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|67aa|down_9|NZ_CP029004.1_868336_868537_+	pfam00665, rve, Integrase core domain
GCF_003076315.1_ASM307631v1	NZ_CP029004	Trueperella pyogenes strain TP-2849 chromosome, complete genome	2	1639483-1639555	2	CRISPRCasFinder	no		cas4,WYL,DEDDh,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3	Orphan	TCGGCTGCGTCTTTTTCGGCTGTCT	25	0	0	NA	NA	NA	1	1	Orphan	cas4,WYL,DEDDh,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,csa3	NA|55aa|up_2|NZ_CP029004.1_1636592_1636757_+,NA|294aa|up_0|NZ_CP029004.1_1637713_1638595_+,NA|181aa|down_6|NZ_CP029004.1_1648605_1649148_+	NA|417aa|up_9|NZ_CP029004.1_1627028_1628279_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|389aa|up_8|NZ_CP029004.1_1628402_1629569_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|368aa|up_7|NZ_CP029004.1_1629601_1630705_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|424aa|up_6|NZ_CP029004.1_1630701_1631973_-	pfam13224, DUF4032, Domain of unknown function (DUF4032)	NA|396aa|up_5|NZ_CP029004.1_1632107_1633295_-	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|513aa|up_4|NZ_CP029004.1_1633553_1635092_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|275aa|up_3|NZ_CP029004.1_1635164_1635989_+	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold	NA|55aa|up_2|NZ_CP029004.1_1636592_1636757_+	NA	NA|299aa|up_1|NZ_CP029004.1_1636815_1637712_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|294aa|up_0|NZ_CP029004.1_1637713_1638595_+	NA	NA|409aa|down_0|NZ_CP029004.1_1640436_1641663_-	cd06174, MFS, Major Facilitator Superfamily	NA|444aa|down_1|NZ_CP029004.1_1641868_1643200_+	pfam07221, GlcNAc_2-epim, N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	NA|223aa|down_2|NZ_CP029004.1_1643222_1643891_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|100aa|down_3|NZ_CP029004.1_1643978_1644278_+	pfam11662, DUF3263, Protein of unknown function (DUF3263)	NA|204aa|down_4|NZ_CP029004.1_1644287_1644899_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|542aa|down_5|NZ_CP029004.1_1645167_1646793_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|181aa|down_6|NZ_CP029004.1_1648605_1649148_+	NA	NA|338aa|down_7|NZ_CP029004.1_1649554_1650568_-	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown]	NA|263aa|down_8|NZ_CP029004.1_1650670_1651459_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|241aa|down_9|NZ_CP029004.1_1651455_1652178_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
