prefix	bacteria_id	bacteria_def	genome_size	prophage_start	prophage_end	method	key_proteins	best_hit_species	CDS_number	attl_region	attr_region
GCF_003095675.1_ASM309567v1	NZ_CP029154	Clostridioides difficile strain CD161 chromosome, complete genome	4295210	273724	285520	DBSCAN-SWA		Synechococcus_phage(37.5%)	9	NA	NA
GCF_003095675.1_ASM309567v1	NZ_CP029154	Clostridioides difficile strain CD161 chromosome, complete genome	4295210	397193	415671	DBSCAN-SWA	integrase	Streptococcus_phage(100.0%)	20	393695:393712	415683:415700
GCF_003095675.1_ASM309567v1	NZ_CP029154	Clostridioides difficile strain CD161 chromosome, complete genome	4295210	1455368	1527927	DBSCAN-SWA	tRNA,portal,plate,tail,integrase,protease	Clostridium_phage(44.44%)	69	1454921:1454939	1529404:1529422
GCF_003095675.1_ASM309567v1	NZ_CP029154	Clostridioides difficile strain CD161 chromosome, complete genome	4295210	1609338	1619067	DBSCAN-SWA		Pandoravirus(37.5%)	11	NA	NA
GCF_003095675.1_ASM309567v1	NZ_CP029154	Clostridioides difficile strain CD161 chromosome, complete genome	4295210	1744713	1800305	DBSCAN-SWA	portal,plate,tail,integrase,terminase,capsid	Clostridium_phage(82.35%)	59	1746548:1746575	1801654:1801681
GCF_003095675.1_ASM309567v1	NZ_CP029154	Clostridioides difficile strain CD161 chromosome, complete genome	4295210	2556288	2570429	DBSCAN-SWA	integrase	Clostridium_phage(71.43%)	17	2562606:2562622	2577323:2577339
GCF_003095675.1_ASM309567v1	NZ_CP029154	Clostridioides difficile strain CD161 chromosome, complete genome	4295210	2808767	2816536	DBSCAN-SWA	holin	Clostridium_phage(57.14%)	8	NA	NA
GCF_003095675.1_ASM309567v1	NZ_CP029154	Clostridioides difficile strain CD161 chromosome, complete genome	4295210	3017468	3077283	DBSCAN-SWA	portal,holin,plate,tail,integrase,terminase,capsid	Clostridium_phage(96.39%)	88	3015757:3015774	3083374:3083391
GCF_003095675.1_ASM309567v1	NZ_CP029154	Clostridioides difficile strain CD161 chromosome, complete genome	4295210	3176911	3185864	DBSCAN-SWA		Catovirus(50.0%)	8	NA	NA
GCF_003095675.1_ASM309567v1	NZ_CP029154	Clostridioides difficile strain CD161 chromosome, complete genome	4295210	3627293	3663815	DBSCAN-SWA	portal,holin,plate,tail,integrase,head,protease,terminase,capsid	Clostridium_phage(79.49%)	47	3652169:3652186	3672979:3672996
GCF_003095675.1_ASM309567v1	NZ_CP029154	Clostridioides difficile strain CD161 chromosome, complete genome	4295210	3869599	3891058	DBSCAN-SWA		Streptococcus_phage(91.3%)	31	NA	NA
GCF_003095675.1_ASM309567v1	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	130529	92	72534	DBSCAN-SWA	integrase	Clostridium_phage(51.16%)	100	1340:1361	58639:58660
GCF_003095675.1_ASM309567v1	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	130529	85436	130304	DBSCAN-SWA	protease,integrase,transposase,tail	Clostridioides_phage(56.25%)	48	99149:99168	116374:116393
GCF_003095675.1_ASM309567v1	NZ_CP029156	Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence	48594	1914	47997	DBSCAN-SWA	capsid,portal,plate,holin,tail,integrase	Clostridioides_phage(48.98%)	67	1333:1347	23690:23704
