The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP029231	Sinorhizobium fredii CCBAU 45436 chromosome, complete genome	4162966	1274319	1288407	4162966	tRNA	uncultured_Mediterranean_phage(81.82%)	14	NA	NA
WP_086018602.1|1274319_1275138_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	35.3	1.0e-32
WP_014328223.1|1275130_1275856_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	45.2	1.7e-39
WP_014328224.1|1275928_1277038_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	33.7	1.5e-10
WP_014328225.1|1277130_1277337_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	68.2	2.8e-08
WP_014328226.1|1277414_1278128_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_014328227.1|1278124_1278967_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	41.4	7.7e-44
WP_037393416.1|1279006_1280290_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.7	7.2e-102
WP_037393414.1|1280315_1281086_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	33.6	3.3e-25
WP_037393412.1|1281082_1281736_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.0	1.2e-15
WP_014328231.1|1281895_1282546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037393411.1|1282710_1284252_+	LysM peptidoglycan-binding domain-containing protein	NA	Q8SBN9	Clostridium_phage	35.9	5.6e-16
WP_037393410.1|1284284_1285160_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_037435264.1|1285459_1285792_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	38.8	5.7e-11
WP_037393390.1|1285836_1288407_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	44.0	3.3e-53
>prophage 2
NZ_CP029231	Sinorhizobium fredii CCBAU 45436 chromosome, complete genome	4162966	1443638	1479472	4162966	portal	Sinorhizobium_phage(82.86%)	48	NA	NA
WP_014328363.1|1443638_1444679_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	38.7	2.4e-47
WP_014328364.1|1444992_1445841_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014328365.1|1445828_1446155_-	multidrug transporter	NA	NA	NA	NA	NA
WP_037392795.1|1446151_1446508_-	multidrug transporter	NA	NA	NA	NA	NA
WP_080579535.1|1446792_1447038_+	DUF982 domain-containing protein	NA	NA	NA	NA	NA
WP_037449049.1|1447034_1447232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037449046.1|1447235_1447607_-	HNH endonuclease	NA	A0A291AUJ4	Sinorhizobium_phage	65.0	1.7e-43
WP_037449043.1|1447603_1448143_-	hypothetical protein	NA	A0A291AUJ2	Sinorhizobium_phage	42.3	1.3e-23
WP_037449040.1|1448139_1448772_-	hypothetical protein	NA	A0A219YFC7	Ochrobactrum_phage	52.0	2.0e-49
WP_037449037.1|1448768_1449077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037449035.1|1449073_1450183_-	phage Gp37/Gp68 family protein	NA	A0A291AUR0	Sinorhizobium_phage	54.9	7.8e-113
WP_050991498.1|1450175_1450781_-	hypothetical protein	NA	A0A291AUC8	Sinorhizobium_phage	84.4	3.1e-95
WP_050991497.1|1450773_1450992_-	hypothetical protein	NA	A0A291AUC9	Sinorhizobium_phage	65.5	5.2e-13
WP_037449032.1|1451096_1451585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037449029.1|1451581_1451884_-	hypothetical protein	NA	A0A291AUJ8	Sinorhizobium_phage	42.9	1.2e-12
WP_037449085.1|1451894_1452146_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050991496.1|1452645_1452900_-	Arc family DNA-binding protein	NA	NA	NA	NA	NA
WP_050988296.1|1453265_1453652_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037449026.1|1453738_1453987_+	hypothetical protein	NA	A0A0A8IN86	Aurantimonas_phage	39.4	3.7e-07
WP_037449023.1|1454217_1454715_+	hypothetical protein	NA	A0A291AUJ7	Sinorhizobium_phage	88.8	3.0e-72
WP_050991495.1|1454714_1454957_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157784509.1|1455151_1456003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080579537.1|1456020_1456362_+	DUF2312 domain-containing protein	NA	Q8W6H2	Sinorhizobium_phage	65.5	9.4e-25
WP_037449020.1|1459158_1460286_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	31.0	3.0e-27
WP_037449016.1|1460282_1460603_+	hypothetical protein	NA	A0A291AUT2	Sinorhizobium_phage	58.9	9.4e-19
WP_037449013.1|1460580_1460790_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050991500.1|1460801_1462088_+	helix-turn-helix domain-containing protein	NA	A0A068CE61	Rhizobium_phage	41.7	5.2e-76
WP_037449068.1|1462071_1462719_+	antitermination protein NusG	NA	A0A291AUL3	Sinorhizobium_phage	64.0	4.5e-76
WP_157784508.1|1462921_1463704_+	hypothetical protein	NA	A0A291AUT0	Sinorhizobium_phage	86.3	2.6e-126
WP_050991493.1|1463874_1464531_+	hypothetical protein	NA	A0A291AUT3	Sinorhizobium_phage	78.9	5.7e-95
WP_109023313.1|1464523_1466122_+	hypothetical protein	NA	A0A291AUS9	Sinorhizobium_phage	78.2	5.6e-261
WP_109023314.1|1465866_1466646_+	hypothetical protein	NA	A0A291AUS9	Sinorhizobium_phage	76.4	2.0e-75
WP_037449003.1|1466646_1466871_+	hypothetical protein	NA	A0A291AUT6	Sinorhizobium_phage	82.4	9.5e-26
WP_050991492.1|1466867_1468433_+|portal	phage portal protein	portal	A0A291AUT1	Sinorhizobium_phage	77.5	1.1e-210
WP_037449001.1|1468429_1469791_+	S49 family peptidase	NA	A0A291AUT8	Sinorhizobium_phage	78.6	6.3e-197
WP_037448998.1|1469826_1470066_+	hypothetical protein	NA	M4MB75	Vibrio_phage	57.9	3.3e-08
WP_037448997.1|1470132_1470558_+	hypothetical protein	NA	A0A291AUU1	Sinorhizobium_phage	93.6	9.4e-67
WP_037448995.1|1470625_1471558_+	hypothetical protein	NA	A0A291AUU5	Sinorhizobium_phage	76.1	1.8e-134
WP_157784507.1|1471631_1472096_+	hypothetical protein	NA	A0A291AUU4	Sinorhizobium_phage	48.8	1.7e-24
WP_157784506.1|1472098_1472431_+	hypothetical protein	NA	A0A291AUT4	Sinorhizobium_phage	70.0	2.5e-38
WP_037448987.1|1472433_1472874_+	hypothetical protein	NA	A0A291AUT7	Sinorhizobium_phage	75.0	3.9e-55
WP_037448984.1|1472883_1473276_+	hypothetical protein	NA	A0A291AUU2	Sinorhizobium_phage	87.6	2.1e-60
WP_037448981.1|1473275_1473650_+	hypothetical protein	NA	A0A291AUT9	Sinorhizobium_phage	69.7	1.2e-44
WP_037448978.1|1473821_1475600_+	hypothetical protein	NA	A0A291AUU3	Sinorhizobium_phage	69.4	1.2e-200
WP_080579536.1|1475617_1476322_+	hypothetical protein	NA	A0A291AUU7	Sinorhizobium_phage	76.5	3.8e-105
WP_037448972.1|1476337_1476922_+	hypothetical protein	NA	A0A291AUU9	Sinorhizobium_phage	93.3	6.4e-106
WP_037448969.1|1476911_1477313_+	hypothetical protein	NA	A0A291AUV2	Sinorhizobium_phage	71.9	4.4e-50
WP_037448966.1|1477309_1479472_+	hypothetical protein	NA	A0A291AUU6	Sinorhizobium_phage	74.3	0.0e+00
>prophage 3
NZ_CP029231	Sinorhizobium fredii CCBAU 45436 chromosome, complete genome	4162966	1602283	1611533	4162966	tRNA	Klosneuvirus(14.29%)	11	NA	NA
WP_014328461.1|1602283_1603834_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	37.8	3.3e-101
WP_014328462.1|1604010_1604316_+	pyrophosphatase	NA	NA	NA	NA	NA
WP_014328463.1|1604310_1605342_-	DNA polymerase III subunit delta'	NA	S5WKH4	Pseudomonas_phage	29.4	1.8e-10
WP_037396478.1|1605338_1606040_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	39.0	4.9e-36
WP_014328465.1|1606096_1607251_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	34.5	9.2e-48
WP_037396470.1|1607317_1608349_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	51.1	3.4e-17
WP_037396481.1|1608646_1608976_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037396473.1|1609370_1609685_-	DUF1476 family protein	NA	NA	NA	NA	NA
WP_012708153.1|1609909_1610674_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	43.5	1.1e-44
WP_012708154.1|1610709_1610952_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_037396499.1|1610975_1611533_+	RNA 2'-phosphotransferase	NA	A0A2H4UTN1	Bodo_saltans_virus	42.0	6.0e-29
>prophage 4
NZ_CP029231	Sinorhizobium fredii CCBAU 45436 chromosome, complete genome	4162966	1884708	1956326	4162966	tail,portal,transposase	Sulfitobacter_phage(38.46%)	59	NA	NA
WP_014330937.1|1884708_1886346_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	42.9	4.9e-103
WP_100209413.1|1886339_1886954_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA	NA
WP_014330935.1|1886983_1887274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014328774.1|1888153_1889512_-|tail	tail fiber domain-containing protein	tail	M4NM77	Sulfitobacter_phage	33.1	2.6e-41
WP_014328775.1|1889571_1890024_-	GNAT family N-acetyltransferase	NA	X2CY06	Brucella_phage	53.6	4.9e-37
WP_037435746.1|1890020_1891631_-	hypothetical protein	NA	A0A088F6U1	Sulfitobacter_phage	38.1	3.6e-82
WP_014328778.1|1892230_1892827_-	hypothetical protein	NA	A0A2K9VHC9	Pseudomonas_phage	25.4	5.7e-09
WP_014328779.1|1892823_1893147_-	hypothetical protein	NA	F8TUS1	EBPR_podovirus	49.5	3.7e-23
WP_014328781.1|1893386_1894382_-	DUF5309 domain-containing protein	NA	A0A088FAT7	Sulfitobacter_phage	71.9	4.4e-131
WP_014328782.1|1894543_1895497_-	hypothetical protein	NA	A0A088F6W8	Sulfitobacter_phage	38.5	3.3e-35
WP_014328783.1|1895656_1895893_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014328784.1|1896441_1898496_-|portal	phage portal protein	portal	A0A088F830	Sulfitobacter_phage	58.7	6.6e-198
WP_014328786.1|1900101_1900443_+	GFA family protein	NA	NA	NA	NA	NA
WP_014328787.1|1900587_1900743_-	DUF3309 domain-containing protein	NA	NA	NA	NA	NA
WP_014328788.1|1901065_1901470_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080577610.1|1902105_1902555_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014328791.1|1902681_1903122_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012708439.1|1904187_1904460_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014328794.1|1904666_1904846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080579515.1|1904874_1905279_-	BA14K family protein	NA	NA	NA	NA	NA
WP_014328799.1|1906348_1907746_+|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_080579514.1|1908440_1909196_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014328802.1|1909210_1909930_+	helix-turn-helix transcriptional regulator	NA	A0A141GF24	Brucella_phage	47.2	4.3e-11
WP_014328803.1|1910103_1910430_+	hypothetical protein	NA	A0A076GCZ5	Sinorhizobium_phage	61.4	7.3e-19
WP_037397205.1|1910426_1910705_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080579513.1|1910712_1911234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014328806.1|1911247_1912000_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_080579516.1|1912143_1913136_-	Tim44 domain-containing protein	NA	NA	NA	NA	NA
WP_080579512.1|1913264_1914209_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_014328809.1|1914446_1915217_-	nodulation protein	NA	NA	NA	NA	NA
WP_037448330.1|1915766_1916684_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_037448328.1|1916911_1917640_-	DNA mismatch repair protein MutT	NA	NA	NA	NA	NA
WP_037448325.1|1917641_1918748_-	endonuclease	NA	NA	NA	NA	NA
WP_014328813.1|1918965_1919409_-	TIGR02594 family protein	NA	NA	NA	NA	NA
WP_037448323.1|1920085_1920661_-	S-(hydroxymethyl)glutathione synthase	NA	NA	NA	NA	NA
WP_141321965.1|1920874_1921087_-	DUF1176 domain-containing protein	NA	NA	NA	NA	NA
WP_037448321.1|1921976_1924946_-	hemolysin	NA	NA	NA	NA	NA
WP_037448319.1|1925076_1927992_-	calcium-binding protein	NA	NA	NA	NA	NA
WP_080577603.1|1928093_1928300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109023324.1|1928495_1930520_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_014328821.1|1930998_1932123_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014328822.1|1932169_1932472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100209366.1|1932544_1932910_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157750304.1|1933038_1933545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080577612.1|1933591_1934761_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037397179.1|1936956_1937625_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014328827.1|1937702_1938845_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014328828.1|1939100_1940441_+	sorbosone dehydrogenase family protein	NA	NA	NA	NA	NA
WP_014328829.1|1940666_1942439_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_014328830.1|1942861_1943899_-	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_014328831.1|1944213_1944408_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037448307.1|1944438_1946151_-	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_037397160.1|1946338_1946947_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_037448298.1|1948348_1950382_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_037448296.1|1950389_1951370_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_037448294.1|1951553_1953866_-	SIR2 family protein	NA	NA	NA	NA	NA
WP_037448292.1|1953935_1955528_-|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	32.6	1.8e-54
WP_037448290.1|1955601_1955946_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	30.6	1.1e-09
WP_100209418.1|1955942_1956326_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP029231	Sinorhizobium fredii CCBAU 45436 chromosome, complete genome	4162966	2318395	2374232	4162966	protease,tRNA,holin,transposase	Paenibacillus_phage(16.67%)	46	NA	NA
WP_037437113.1|2318395_2319115_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_037400814.1|2319298_2319511_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109023335.1|2319590_2322620_-	calcium-binding protein	NA	NA	NA	NA	NA
WP_037447792.1|2322883_2325922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037447789.1|2326476_2327577_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012708843.1|2327632_2327944_-|protease	ATP-dependent Clp protease adapter ClpS	protease	NA	NA	NA	NA
WP_037447786.1|2328120_2329224_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_014329133.1|2329263_2329719_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_014329134.1|2329715_2330186_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_014328393.1|2330563_2331586_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_086021277.1|2331688_2332448_+|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	43.9	3.2e-25
WP_037400797.1|2332462_2333005_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	44.8	2.2e-36
WP_012708848.1|2333302_2333488_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_014329136.1|2333503_2334763_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A1B0V011	Roseobacter_phage	43.4	3.6e-53
WP_014329137.1|2334759_2335392_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_014329138.1|2335388_2336012_-	DUF1285 domain-containing protein	NA	NA	NA	NA	NA
WP_037400794.1|2336278_2337292_+	MoxR family ATPase	NA	NA	NA	NA	NA
WP_014329140.1|2337295_2338216_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_014329141.1|2338212_2341026_+	DUF4159 domain-containing protein	NA	NA	NA	NA	NA
WP_037447768.1|2341033_2343103_+	membrane protein	NA	NA	NA	NA	NA
WP_037447765.1|2343577_2344138_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_037447762.1|2344393_2345371_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_037447758.1|2345375_2345864_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_014329147.1|2346357_2347266_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_037447740.1|2347437_2347983_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_014329149.1|2348162_2348681_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_037447737.1|2348684_2349512_+	anti-sigma factor	NA	NA	NA	NA	NA
WP_037447733.1|2349711_2351421_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_037447748.1|2351848_2352436_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	37.3	8.3e-29
WP_014329154.1|2352667_2353246_+	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_014329155.1|2353397_2353862_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	48.6	1.0e-29
WP_014329156.1|2353891_2354809_-	cation transporter	NA	NA	NA	NA	NA
WP_014329157.1|2354988_2357178_-	anthranilate synthase	NA	NA	NA	NA	NA
WP_037447730.1|2357470_2359576_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_037428990.1|2359837_2360653_+	extensin	NA	NA	NA	NA	NA
WP_037447727.1|2360653_2361112_-	thioesterase	NA	NA	NA	NA	NA
WP_037447725.1|2361266_2361776_+	DUF1993 domain-containing protein	NA	NA	NA	NA	NA
WP_037428995.1|2361797_2363477_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_037447722.1|2363564_2364785_-	DUF2333 family protein	NA	NA	NA	NA	NA
WP_037396098.1|2364788_2366078_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014329165.1|2366270_2366678_-	DUF559 domain-containing protein	NA	NA	NA	NA	NA
WP_037429004.1|2368863_2370012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037396079.1|2370073_2371162_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014329169.1|2371376_2371964_-	thymidine kinase	NA	A0A1Z1LYD5	Serratia_phage	53.2	9.1e-52
WP_037447718.1|2372247_2373204_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_037396090.1|2373386_2374232_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
>prophage 1
NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	418014	0	66432	418014	integrase,transposase	Burkholderia_phage(15.38%)	53	30063:30122	62613:63745
WP_014858028.1|1242_2223_+	plasmid partitioning protein RepB	NA	A0A240F4U0	Ochrobactrum_phage	39.1	7.5e-59
WP_014858027.1|2377_3592_+	replication initiation protein RepC	NA	L7TKN6	Rhizobium_phage	26.2	2.2e-15
WP_158499791.1|5738_6314_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034859522.1|6313_6520_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	47.1	2.3e-10
WP_015633599.1|6667_7585_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	51.7	5.6e-32
WP_158499787.1|8461_8812_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014330933.1|8595_9267_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014330219.1|9487_10405_-	AAA family ATPase	NA	Q6QIE1	Burkholderia_phage	25.1	1.4e-06
WP_014330217.1|12047_12644_-	recombinase family protein	NA	E5FFF9	Burkholderia_phage	49.5	5.2e-39
WP_014330934.1|13114_14110_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_014330935.1|14118_14409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100209413.1|14438_15053_-	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA	NA
WP_014330937.1|15046_16684_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	42.9	4.9e-103
WP_014330938.1|16729_17077_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	64.5	3.4e-38
WP_014330939.1|17073_17466_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_014857770.1|17874_19113_-	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
WP_014857769.1|19131_20736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100209377.1|20766_21663_-	agmatinase family protein	NA	NA	NA	NA	NA
WP_014857767.1|21714_22911_-	radical SAM protein	NA	NA	NA	NA	NA
WP_014857764.1|24116_27620_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037446536.1|27741_28821_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_034859931.1|29136_29709_+	hypothetical protein	NA	NA	NA	NA	NA
30063:30122	attL	GTAATACCAACGAGCGGTGATCATGACCGATGCGCCCATTCGCGGAGTCCGATGGACATG	NA	NA	NA	NA
WP_085939171.1|30082_31143_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_037437088.1|31545_32721_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_014857771.1|32730_33600_-|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	34.3	1.7e-33
WP_015633366.1|35099_36797_-	phosphoethanolamine transferase	NA	NA	NA	NA	NA
WP_015633367.1|37083_37356_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_037457247.1|37355_37916_+	cytochrome b561	NA	NA	NA	NA	NA
WP_014858088.1|37930_38605_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	28.3	2.3e-19
WP_015633368.1|38853_39105_-	WGR domain-containing protein	NA	NA	NA	NA	NA
WP_015633369.1|39406_39901_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_153458762.1|40018_40279_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015633371.1|40516_40957_-	hypothetical protein	NA	NA	NA	NA	NA
WP_034859607.1|40949_41663_-	ParA family protein	NA	A0A2H4JGZ2	uncultured_Caudovirales_phage	27.6	8.0e-10
WP_034859608.1|42307_42709_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_034859609.1|42712_45214_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034859612.1|45219_45432_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034859614.1|45764_46205_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_014329692.1|46201_46633_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_109023434.1|46746_47463_-|transposase	IS6 family transposase	transposase	NA	NA	NA	NA
WP_050991653.1|47736_48393_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034859668.1|51618_52944_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	30.5	8.4e-29
WP_014330950.1|53134_53440_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_014857518.1|53439_53790_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_034859669.1|54207_54387_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109023434.1|55139_55856_-|transposase	IS6 family transposase	transposase	NA	NA	NA	NA
WP_014330959.1|60488_61094_-	DUF1419 domain-containing protein	NA	NA	NA	NA	NA
WP_085939171.1|61591_62651_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_014330962.1|62652_63351_-	DUF3991 domain-containing protein	NA	NA	NA	NA	NA
WP_014330963.1|63347_63557_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100209375.1|63991_64969_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
62613:63745	attR	CATGTCCATCGGACTCCGCGAATGGGCGCATCGGTCATGATCACCGCTCGTTGGTATTACTGAGATATACGGTTCCATCACGCAGCCCCTCGATGGCGGCAAGGCTCATGGCATCGATAGCAGCTTCAGTGACGGCCAGGCGCAACGCTGTGTCCGGCCCCAGACGGAAGAGACCCTTCGTTCCTCCGGAGGCAAAGCCCCGATACTCAGGCCCTCGCGCCTCCCAGCCGGTCACAGCGCCCGCATTGTCCGTATGCGCTGCCCACATGCTGCCATAGGGACCCTCCCGGAGGCGGTCTTGCCGGATTGTCGCGCGGAGCACGTTGGCTGGCAGGAAACGCTCGCCGGAGAGATAAGCCCACGTCGACGAGCCGGGCCACGGATAGCGGCGTCCCTGCCAACGCTCGGGCAGAGAAAGGTCGTGGTTTTGATCGGGCCTGGGCGCCTGCCATTCCGGCTCGTCGATCGTGAAACCGACGAGGTCGGCGACCCTCCCGGCGCCTTCGAGAAATCCGACATGATCGAGATGTTCGACAAGTCCGAACACATCCCCTTTCGCATCGCTGAGCGGATCGAACCATCCGCGCCCCTCATGAACCACGATGATGATTTCAGCGCCACGCCGAAACTTCACCGCCCGCCGGGTACTCTCCTTCGCATCGATGGCGAAGCCCGCATGCTCAAGAACAGCCGCACAGCCTACCCGTTCGCGCAGCGCCTCTATTTCCTTCCTGTTCATGCCTCTTCCTCTTTGCCTTGCTTGCCCGTCGCTTCGCGGGCGCACTTCCACCAGCCGCGAAGAGCAAAGGCGGCAAGGGCACGGCTGGCAATTGTCGGATCATGCAAGACCCGGCCGCGGCGCAGCCTCCCTTGCGGCCTGCCGCTCGCAAGCGGCACGCCGGAGGCACAGGCCGGCTCAATGAGCCGGCCATGGGAAGAACTCATGGACGATCTCAAGATCGTCATCGGCGTCGATCTCGTCGGAAGGAAGCACGCCGTACTCGCCGCCGACCGAGAAGAGGGTGACCGGGACCATCAGGTCGCGGGAGAGCTGGAAGGCGTGGGATTGAGCGAGGGAAAGATCGTGCGACATGTGAGAGGCTCCTTCGGGAGCGGGCCAATCCCGCTCGATG	NA	NA	NA	NA
WP_014330966.1|65035_65236_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014857732.1|65628_66432_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	3.5e-30
>prophage 2
NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	418014	73666	165066	418014	transposase	Stx2-converting_phage(30.0%)	57	NA	NA
WP_014330974.1|73666_74560_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	28.2	4.3e-21
WP_100209376.1|74758_75682_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014330978.1|76638_76839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109023434.1|76822_77539_-|transposase	IS6 family transposase	transposase	NA	NA	NA	NA
WP_014330979.1|77888_79634_+	E3 ubiquitin--protein ligase	NA	NA	NA	NA	NA
WP_014857719.1|81132_81618_+	NTPase KAP	NA	NA	NA	NA	NA
WP_014857718.1|81643_82012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109023434.1|83343_84060_+|transposase	IS6 family transposase	transposase	NA	NA	NA	NA
WP_015633430.1|84414_85386_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015633429.1|85473_86445_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_014328393.1|86861_87884_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_083846302.1|89786_90770_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_014328473.1|90868_91789_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	34.3	2.0e-29
WP_014331811.1|91785_93300_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_015633423.1|99420_99867_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015633422.1|99863_100124_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015633421.1|101014_101821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034859947.1|103264_103729_+	phasin	NA	NA	NA	NA	NA
WP_014857788.1|104958_107139_-	S9 family peptidase	NA	A0A1V0SHT0	Klosneuvirus	32.8	1.1e-41
WP_014328799.1|111335_112733_-|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_153297037.1|113769_114075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080579325.1|115560_116253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041409929.1|116774_118319_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_085939171.1|118408_119468_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_100209425.1|122059_122410_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014857794.1|122489_123347_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015633362.1|123440_123719_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_014857792.1|123715_124243_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037403046.1|124366_126214_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_015633363.1|126213_126702_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014857789.1|126689_127721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037446536.1|127799_128879_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_085939171.1|129252_130313_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_080582764.1|130507_131368_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014857716.1|131369_132251_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_015633573.1|134018_134165_+	family 16 glycosylhydrolase	NA	NA	NA	NA	NA
WP_014328799.1|135112_136510_+|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_014857807.1|137304_138456_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_037456790.1|138855_139299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014330939.1|139362_139755_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_014330938.1|139751_140099_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	64.5	3.4e-38
WP_014330937.1|140144_141782_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	42.9	4.9e-103
WP_100209413.1|141775_142390_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA	NA
WP_014330935.1|142419_142710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034859923.1|142748_143900_+	carbamoyltransferase	NA	E3SK81	Synechococcus_phage	34.8	5.4e-24
WP_014327878.1|145062_145896_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_014858061.1|147651_148101_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBP6	Stx2-converting_phage	40.4	5.2e-07
WP_015633495.1|148081_148435_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	48.4	5.5e-20
WP_085939171.1|149555_150615_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_014858057.1|153071_154283_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_014858053.1|155866_156610_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_014328799.1|158490_159888_-|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_014858072.1|160205_160985_+	radical SAM protein	NA	NA	NA	NA	NA
WP_015633488.1|161392_161983_+	nodulation N-acyltransferase NodA	NA	NA	NA	NA	NA
WP_010875356.1|161979_162627_+	chitooligosaccharide deacetylase NodB	NA	NA	NA	NA	NA
WP_014858070.1|162641_163883_+	chitooligosaccharide synthase NodC	NA	M1HPL2	Paramecium_bursaria_Chlorella_virus	26.7	2.5e-11
WP_015633486.1|164034_165066_+	nodulation factor ABC transporter ATP-binding protein NodI	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.5	9.4e-28
>prophage 3
NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	418014	168183	168909	418014		Tetraselmis_virus(100.0%)	1	NA	NA
WP_014858065.1|168183_168909_+	2-O-methyltransferase NoeI	NA	A0A2P0VP97	Tetraselmis_virus	28.3	3.3e-11
>prophage 4
NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	418014	173449	234454	418014	integrase,transposase	Stx2-converting_phage(40.0%)	44	193212:193271	223739:224677
WP_037446536.1|173449_174529_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_109023435.1|174896_176261_+	cytochrome P450	NA	NA	NA	NA	NA
WP_034859623.1|176206_176515_+	ferredoxin	NA	NA	NA	NA	NA
WP_034859625.1|177866_178847_+	farnesyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_014857759.1|178982_180533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014857758.1|180529_181432_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015633476.1|181517_182567_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_015633473.1|183853_184855_+|integrase	site-specific integrase	integrase	S5M9V8	Brevibacillus_phage	23.6	4.1e-12
WP_014327878.1|186684_187518_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_014858092.1|188299_188704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014330863.1|189446_189680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014330862.1|189660_191361_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	40.5	4.6e-88
WP_080577875.1|191406_191745_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	55.4	3.3e-30
WP_014330860.1|191756_192128_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_034859935.1|192206_193037_+	glycoside hydrolase family 16 protein	NA	M1HRU7	Paramecium_bursaria_Chlorella_virus	26.3	1.0e-16
193212:193271	attL	TAAGAGCCTGACCGAAAAAGAGTTGAGTGAAATCAGCCAGTTGTGATTCTGTTTGTTTGC	NA	NA	NA	NA
WP_014327878.1|193292_194126_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_034859708.1|194145_194631_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014858080.1|195351_196389_+|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	43.0	3.9e-13
WP_014328393.1|200912_201935_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_015633467.1|202087_202351_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014330935.1|204297_204588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100209413.1|204617_205232_-	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA	NA
WP_014330937.1|205225_206863_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	42.9	4.9e-103
WP_014330938.1|206908_207256_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	64.5	3.4e-38
WP_014330939.1|207252_207645_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_014857776.1|207694_207862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014857771.1|208961_209831_+|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	34.3	1.7e-33
WP_037437088.1|209840_211016_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_086018849.1|211414_212368_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_014857748.1|212432_214544_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014857747.1|214592_216383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014857746.1|216435_216834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014857744.1|217070_217985_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_014328473.1|218848_219769_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	34.3	2.0e-29
WP_014331811.1|219765_221280_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_080577877.1|222264_223680_-	radical SAM family RiPP maturation amino acid epimerase	NA	NA	NA	NA	NA
WP_014327878.1|223819_224653_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_037462953.1|224792_225170_-	hypothetical protein	NA	NA	NA	NA	NA
223739:224677	attR	TAAGAGCCTGACCGAAAAAGAGTTGAGTGAAATCAGCCAGTTGTGATTCTGTTTGTTTGCTTAGGACGAACGGAGACCACAATGGGCTGGACTGATTTCACCCGTCGGCAATATGCCCGACGCGCAAGGCGGTATGCAAGCGATCTGACGGACCGGGAATGGGGATTGATCTCGCCTTGCCTGCCTGGACCGCGGCGGTTGGGCAGGCCGCGCAGCACCGATCTTCGCGAGGTCGTGAATGCGTTGCTTTACATCGCCACGACGGGGTGCCAGTGGCGGATGATGCCCAAGGATTTTCCGCCTTTTACAACTGTCCAGTCCTATTTCTACGAATGGCGAGCGACAGGGTTATGGGGTCGGATCAACCATCATCTTGTGATGGAGGCGCGCGAATTGGAAGGCCGGGAAGCCTCGCCATCTGCTGGCGTGATTGACAGTCAAAGCGTGAAAACCACGGAAAGCGGCGGAATTTCGGGCTATGACGCGGGCAAGAAGATCAAGGGACGGAAGCGTCATATCGTCGTCGACACGCTCGGGTTGATGGTCGGCCTCAGGGTTCACAGCGCCGATATCCAAGATCGCGACGGCGCACCTGCCGTCCTCAAAACCATTCTCAAGCGCTGGCCGTGGCTGAGACATATCTTCGCCGACGGTGGTTATGCCGGACCGAAGCTGAAGGGCGCACTCCAAAAGATCGCTGCCTTCACTCTCCAGATCGTCAAGCGGACCGACAAGGCCAAGGGCTTCGAAGTTCTGCCGCGGCGCTGGGTCGTGGAGCGCACCTTCGCATGGCTTGGCAGATGCCGACGATTGGCTAAGGATTGGGAGAAGTCCATCGCATCAGCCGAGGCTTGGATCACTATCGCCCACATCCGGGTCCTGACACGACGCTTGGCAAGGTACGGATATTGTTGAGACCTTTTCGAGTCAGGCTCTAAG	NA	NA	NA	NA
WP_014857676.1|225809_226262_-	nitrogenase stabilizing/protective protein NifW	NA	NA	NA	NA	NA
WP_014857675.1|226425_227589_-	cysteine desulfurase NifS	NA	H7BUW1	unidentified_phage	36.4	9.6e-37
WP_015633453.1|228586_230455_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014857671.1|230778_231150_-	C4-dicarboxylate transporter DctA	NA	NA	NA	NA	NA
WP_014857667.1|233325_233550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014327878.1|233620_234454_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	418014	245388	246949	418014		Lake_Baikal_phage(50.0%)	2	NA	NA
WP_014857651.1|245388_245709_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	37.6	2.9e-12
WP_014857650.1|246382_246949_-	peroxiredoxin	NA	M1TUY3	Synechococcus_phage	54.0	9.1e-49
>prophage 6
NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	418014	251746	253393	418014		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_034859517.1|251746_253393_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	35.5	1.7e-15
>prophage 7
NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	418014	266398	270191	418014		Acanthamoeba_polyphaga_moumouvirus(33.33%)	3	NA	NA
WP_014857633.1|266398_267937_+	insulinase family protein	NA	L7RBE7	Acanthamoeba_polyphaga_moumouvirus	29.3	1.2e-23
WP_014857632.1|267933_269277_+	insulinase family protein	NA	G3MBJ8	Bacillus_virus	22.2	7.7e-14
WP_014857631.1|269759_270191_+	helix-turn-helix transcriptional regulator	NA	A0A223W054	Agrobacterium_phage	47.1	4.8e-26
>prophage 8
NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	418014	275712	308838	418014	transposase	Stx2-converting_phage(25.0%)	24	NA	NA
WP_041415762.1|275712_276792_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_014857619.1|279005_279263_-	hypothetical protein	NA	A0A2I7REY7	Vibrio_phage	49.2	4.9e-10
WP_048655403.1|279725_281294_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_080577876.1|281555_281774_+	DUF2188 domain-containing protein	NA	E8ZD70	Streptococcus_phage	51.4	2.4e-10
WP_078070821.1|282323_282506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034859779.1|283227_284778_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.1	2.2e-113
WP_014330860.1|285475_285847_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_080577875.1|285858_286197_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	55.4	3.3e-30
WP_014330862.1|286242_287943_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	40.5	4.6e-88
WP_014330863.1|287923_288157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085939171.1|289599_290660_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_048655401.1|290992_291457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015633375.1|291482_291953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109023438.1|294002_295062_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_015633378.1|295117_295483_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_015633379.1|295479_296349_+|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	29.3	2.8e-25
WP_014857614.1|298986_299997_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_014857613.1|300203_300749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080577842.1|300748_301072_-	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_014857607.1|303234_303852_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014857606.1|303982_304429_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_015633385.1|304574_305006_-	helix-turn-helix transcriptional regulator	NA	A0A223W054	Agrobacterium_phage	46.3	2.9e-23
WP_014857603.1|305605_306571_-	transcriptional regulator NodD1	NA	NA	NA	NA	NA
WP_015633387.1|307299_308838_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	28.0	9.1e-51
>prophage 9
NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	418014	311843	313852	418014		Acanthocystis_turfacea_Chlorella_virus(50.0%)	2	NA	NA
WP_014857595.1|311843_312899_+	GDP-mannose 4,6-dehydratase	NA	M1HKK4	Acanthocystis_turfacea_Chlorella_virus	64.3	4.5e-126
WP_014857594.1|312907_313852_+	GDP-L-fucose synthase	NA	D1LW79	Prochlorococcus_phage	50.6	3.6e-90
>prophage 10
NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	418014	327152	387198	418014	protease,transposase	uncultured_virus(18.18%)	50	NA	NA
WP_014330283.1|327152_327614_-	Hsp20 family protein	NA	C7BV44	Synechococcus_phage	37.4	5.2e-18
WP_014330282.1|327977_328292_+	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	60.9	3.1e-22
WP_014330281.1|328346_329975_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	60.7	1.3e-177
WP_080579830.1|330120_331512_+|protease	DegQ family serine endoprotease	protease	NA	NA	NA	NA
WP_014330279.1|331567_331879_+	DUF982 domain-containing protein	NA	NA	NA	NA	NA
WP_014330278.1|331899_332232_+	DUF982 domain-containing protein	NA	NA	NA	NA	NA
WP_014330914.1|332236_332443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034859270.1|332685_333330_-	recombinase family protein	NA	A0A286S1P7	Klebsiella_phage	33.3	6.3e-14
WP_014330276.1|333426_336324_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	37.8	5.8e-184
WP_014857579.1|338151_338367_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037446536.1|338773_339853_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_034859779.1|341860_343411_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.1	2.2e-113
WP_014330860.1|343977_344349_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_080577875.1|344360_344699_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	55.4	3.3e-30
WP_014330862.1|344744_346445_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	40.5	4.6e-88
WP_014330863.1|346425_346659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015633401.1|347654_348203_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014857573.1|348219_350313_-	EscV/YscV/HrcV family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
WP_014857572.1|350501_351392_-	hypothetical protein	NA	NA	NA	NA	NA
WP_034859385.1|351498_351714_-	nodulation protein NopA	NA	NA	NA	NA	NA
WP_010875097.1|351784_352081_-	nodulation protein NopC	NA	NA	NA	NA	NA
WP_037457110.1|352782_353595_-	effector protein NopP	NA	NA	NA	NA	NA
WP_014857567.1|354390_355428_-	translocation protein	NA	NA	NA	NA	NA
WP_034859387.1|355424_356243_-	EscT/YscT/HrcT family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
WP_010875101.1|356251_356527_-	EscS/YscS/HrcS family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
WP_014857564.1|356526_357195_-	EscR/YscR/HrcR family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
WP_080577801.1|357187_358264_-	YscQ/HrcQ family type III secretion apparatus protein	NA	NA	NA	NA	NA
WP_014857562.1|358289_358826_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015633405.1|358801_360157_-	EscN/YscN/HrcN family type III secretion system ATPase	NA	NA	NA	NA	NA
WP_014857560.1|360153_360780_-	nodulation protein NolV	NA	NA	NA	NA	NA
WP_015633406.1|360781_361420_-	nodulation protein NolU	NA	NA	NA	NA	NA
WP_014857558.1|361416_362286_-	nodulation protein NolT	NA	NA	NA	NA	NA
WP_014857557.1|362295_362790_-	nodulation protein NolB	NA	NA	NA	NA	NA
WP_032490256.1|362945_363650_+	nodulation protein NolW	NA	NA	NA	NA	NA
WP_014857555.1|363931_365722_+	type II secretion system effector nodulation protein NopX	NA	NA	NA	NA	NA
WP_078070819.1|365870_366335_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_014857550.1|367686_368697_+	cysteine synthase family protein	NA	NA	NA	NA	NA
WP_014857549.1|368693_369833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014857548.1|369832_371719_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
WP_014857547.1|371715_372930_+	MFS transporter	NA	NA	NA	NA	NA
WP_014857546.1|373187_374204_+	type II secretion system effector nodulation protein NopL	NA	NA	NA	NA	NA
WP_014328393.1|374753_375776_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_014857545.1|375994_376561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078070767.1|376570_377842_-	type II and III secretion system protein family protein	NA	NA	NA	NA	NA
WP_014857543.1|378021_378702_-	response regulator	NA	W8CYM9	Bacillus_phage	26.5	3.8e-17
WP_014857541.1|379870_380077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014857540.1|380396_381335_+	transcriptional regulator NodD2	NA	NA	NA	NA	NA
WP_086018076.1|382279_383469_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	43.3	7.0e-51
WP_014857536.1|384459_385203_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	46.1	3.5e-56
WP_014327878.1|386364_387198_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 1
NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1961287	535138	542690	1961287	transposase	Sinorhizobium_phage(50.0%)	10	NA	NA
WP_109023394.1|535138_535492_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	54.8	2.4e-31
WP_109023395.1|535537_537238_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	40.9	2.4e-89
WP_018237844.1|537218_537452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080579725.1|537581_538013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037454304.1|538258_538723_+	lysozyme	NA	A0A1L2BWX1	Bacteriophage	45.9	2.2e-24
WP_037454302.1|538719_539136_+	hypothetical protein	NA	A0A0F6YQP1	Sinorhizobium_phage	58.5	6.7e-41
WP_157784534.1|539249_539705_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037454296.1|539921_540371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037454294.1|540518_540995_-	hypothetical protein	NA	A0A0F6R5Y6	Sinorhizobium_phage	46.8	1.3e-32
WP_037454291.1|540998_542690_-	hypothetical protein	NA	A0A0F6TGS7	Sinorhizobium_phage	48.3	1.6e-61
>prophage 1
NZ_CP029234	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436d, complete sequence	201059	5584	59509	201059	transposase,protease,integrase	uncultured_virus(18.18%)	43	NA	NA
WP_014857974.1|5584_5851_-|integrase	integrase	integrase	NA	NA	NA	NA
WP_014857977.1|7660_8365_-	hypothetical protein	NA	A0A1B1IPD9	uncultured_Mediterranean_phage	40.6	1.9e-19
WP_014857978.1|8379_11883_-	DEAD/DEAH box helicase	NA	A0A2H4UVG1	Bodo_saltans_virus	24.0	1.5e-13
WP_014857979.1|11869_12652_-	DUF1837 domain-containing protein	NA	NA	NA	NA	NA
WP_014857980.1|12667_13687_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_014857981.1|13679_14273_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014330276.1|14455_17353_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	37.8	5.8e-184
WP_034859270.1|17449_18094_+	recombinase family protein	NA	A0A286S1P7	Klebsiella_phage	33.3	6.3e-14
WP_014330914.1|18336_18543_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014330278.1|18547_18880_-	DUF982 domain-containing protein	NA	NA	NA	NA	NA
WP_014330279.1|18900_19212_-	DUF982 domain-containing protein	NA	NA	NA	NA	NA
WP_080579830.1|19267_20659_-|protease	DegQ family serine endoprotease	protease	NA	NA	NA	NA
WP_014330281.1|20804_22433_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	60.7	1.3e-177
WP_109023439.1|22504_23265_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	43.0	5.5e-25
WP_014330282.1|23333_23648_-	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	60.9	3.1e-22
WP_014330283.1|24011_24473_+	Hsp20 family protein	NA	C7BV44	Synechococcus_phage	37.4	5.2e-18
WP_034859295.1|24571_25081_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_014330285.1|25146_25518_+	NADH dehydrogenase	NA	NA	NA	NA	NA
WP_014330287.1|26010_26292_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014330289.1|26760_27081_-	DUF982 domain-containing protein	NA	NA	NA	NA	NA
WP_015633557.1|27844_28786_+	DUF2493 domain-containing protein	NA	A0A291L9X7	Bordetella_phage	40.5	1.4e-17
WP_015633558.1|28870_29137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014857681.1|29133_29532_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_014857684.1|30147_30471_+	DUF736 family protein	NA	NA	NA	NA	NA
WP_014857686.1|31054_31363_-	WGR domain-containing protein	NA	NA	NA	NA	NA
WP_014857689.1|32148_34068_-	Ti-type conjugative transfer system protein TraG	NA	NA	NA	NA	NA
WP_014857690.1|34058_34298_-	conjugal transfer protein TraD	NA	NA	NA	NA	NA
WP_015633561.1|34287_34575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015633563.1|34799_39419_+	Ti-type conjugative transfer relaxase TraA	NA	W5S5P4	Pithovirus	24.2	7.0e-06
WP_014857693.1|39449_39719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014857694.1|39721_42196_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_014857695.1|42230_42563_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015633565.1|43201_44815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015633567.1|46222_47164_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_015633568.1|47919_48309_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_015633569.1|48395_49091_-	VIT family protein	NA	NA	NA	NA	NA
WP_014857705.1|49653_50040_+	DUF1515 family protein	NA	A0A291AUW4	Sinorhizobium_phage	54.9	1.1e-08
WP_014857707.1|50953_51304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014857710.1|53592_53736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014328799.1|54275_55673_+|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_157783890.1|56703_56946_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_015633503.1|57358_57907_-	VOC family protein	NA	NA	NA	NA	NA
WP_100209355.1|58186_59509_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 1
NZ_CP029235	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436e, complete sequence	170473	4740	87642	170473	transposase,tRNA,integrase	Burkholderia_phage(22.22%)	55	NA	NA
WP_037456609.1|4740_5916_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_037456648.1|5984_6263_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_037456613.1|6249_6681_+	mRNA interferase PemK	NA	NA	NA	NA	NA
WP_158499787.1|7273_7624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014330933.1|7407_8079_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014330219.1|8299_9217_-	AAA family ATPase	NA	Q6QIE1	Burkholderia_phage	25.1	1.4e-06
WP_014330217.1|10860_11457_-	recombinase family protein	NA	E5FFF9	Burkholderia_phage	49.5	5.2e-39
WP_085939171.1|11749_12810_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_014330214.1|12892_14251_-|transposase	ISKra4-like element ISSfr3 family transposase	transposase	NA	NA	NA	NA
WP_037457133.1|14759_16709_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_003532611.1|16736_17129_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014330212.1|17192_18803_+	tyrosinase family protein	NA	NA	NA	NA	NA
WP_037457137.1|18933_19263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037457139.1|19801_20632_-	oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	22.2	6.9e-05
WP_014330209.1|20786_22007_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014330208.1|22063_23449_-	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
WP_014330207.1|23731_25123_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_014330206.1|25161_26691_+	membrane protein	NA	NA	NA	NA	NA
WP_014330205.1|26687_27119_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014330204.1|27115_28600_+	cytochrome c	NA	NA	NA	NA	NA
WP_014330203.1|28622_31397_+	cytochrome c	NA	NA	NA	NA	NA
WP_037457145.1|31399_33202_+	FAD-binding protein	NA	A0A1V0SI18	Klosneuvirus	28.1	4.3e-36
WP_109023440.1|36763_37927_-|transposase	ISKra4 family transposase	transposase	NA	NA	NA	NA
WP_003532643.1|39156_39453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014330197.1|39502_39727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003532639.1|39853_40063_-	cold-shock protein	NA	A0A218MMZ6	uncultured_virus	52.8	1.2e-09
WP_080579793.1|41788_42253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086023320.1|43607_43775_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109023434.1|43824_44541_-|transposase	IS6 family transposase	transposase	NA	NA	NA	NA
WP_080579795.1|44744_44927_-	protein usg	NA	NA	NA	NA	NA
WP_037456347.1|44944_45232_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_037456350.1|45825_46188_-	SPW repeat protein	NA	NA	NA	NA	NA
WP_014330926.1|46914_47217_+	DUF982 domain-containing protein	NA	NA	NA	NA	NA
WP_109023441.1|47828_48149_-	DUF982 domain-containing protein	NA	NA	NA	NA	NA
WP_037456357.1|48893_49979_+	AAA family ATPase	NA	M4QMW8	Micromonas_pusilla_virus	35.3	2.3e-16
WP_014330863.1|51228_51462_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014330862.1|51442_53143_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	40.5	4.6e-88
WP_080577875.1|53188_53527_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	55.4	3.3e-30
WP_014330860.1|53538_53910_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_050991633.1|54010_55165_+	S8 family serine peptidase	NA	NA	NA	NA	NA
WP_037456362.1|55719_57057_-	adenylosuccinate lyase family protein	NA	NA	NA	NA	NA
WP_037456364.1|57137_58109_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_050991632.1|58277_59369_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_037456366.1|59424_59901_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_037456369.1|59911_61414_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
WP_037456384.1|61597_62494_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_037456390.1|62642_63698_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_109023442.1|64026_73209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109023443.1|73208_73805_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109023444.1|74062_81820_-	toxin	NA	NA	NA	NA	NA
WP_080579797.1|82741_83158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109023448.1|83373_84270_+	ATP-dependent DNA ligase	NA	A0A076GD42	Sinorhizobium_phage	75.0	2.6e-127
WP_157784547.1|84495_84765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037456425.1|86254_86857_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037456429.1|87186_87642_+|transposase	transposase	transposase	NA	NA	NA	NA
