The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP029372	Listeria monocytogenes strain 2018TE5305-1-4 chromosome, complete genome	2894782	117463	123988	2894782	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003721739.1|117463_117916_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|117921_118257_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003732219.1|118473_118902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003732220.1|118913_119330_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	39.3	1.3e-20
WP_014600375.1|119607_119997_+	DUF5072 family protein	NA	NA	NA	NA	NA
WP_003721744.1|120009_120522_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|120569_120872_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009911444.1|120913_121318_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014600377.1|121304_123173_+	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_003721748.1|123169_123988_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	4.2e-39
>prophage 2
NZ_CP029372	Listeria monocytogenes strain 2018TE5305-1-4 chromosome, complete genome	2894782	658887	689133	2894782	portal,capsid,integrase,tail,head,holin,protease,terminase	Listeria_phage(60.71%)	40	664743:664759	674290:674306
WP_014930665.1|658887_660039_-|integrase	site-specific integrase	integrase	A8ATX2	Listeria_phage	46.3	4.5e-87
WP_039187930.1|660060_660774_-	lipoprotein	NA	NA	NA	NA	NA
WP_031641923.1|660828_661329_-	hypothetical protein	NA	A0A1S7FYX8	Listeria_phage	31.1	7.1e-13
WP_039187933.1|661329_661680_-	helix-turn-helix domain-containing protein	NA	A0A059T669	Listeria_phage	47.6	7.9e-19
WP_031641921.1|661833_662031_+	helix-turn-helix transcriptional regulator	NA	A0A059T7X5	Listeria_phage	52.3	7.5e-11
WP_039187936.1|662053_662380_+	DUF771 domain-containing protein	NA	A0A2H4J474	uncultured_Caudovirales_phage	40.6	3.2e-14
WP_039188040.1|663592_663949_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_039188042.1|663945_664362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023552249.1|664358_664535_+	hypothetical protein	NA	A8ATL8	Listeria_phage	70.7	1.7e-14
WP_039188044.1|664548_665073_+	hypothetical protein	NA	A0A059T5F9	Listeria_phage	95.4	5.9e-95
664743:664759	attL	GGGAAATGATTTCTTTA	NA	NA	NA	NA
WP_014601512.1|665081_665546_+	class I SAM-dependent methyltransferase	NA	A0A059T693	Listeria_phage	96.8	6.9e-87
WP_039194685.1|665542_666103_+	DUF1642 domain-containing protein	NA	A8ATY9	Listeria_phage	95.7	3.8e-100
WP_014601510.1|666161_666563_+	hypothetical protein	NA	A8ATD9	Listeria_phage	100.0	2.6e-74
WP_039194683.1|666559_666769_+	hypothetical protein	NA	A8ATE0	Listeria_phage	94.2	1.6e-30
WP_039194681.1|666872_667052_+	hypothetical protein	NA	A0A076G7F4	Listeria_phage	85.5	1.4e-19
WP_039194679.1|667048_667528_+	single-stranded DNA-binding protein	NA	A8ATZ7	Listeria_phage	83.8	2.5e-68
WP_039187812.1|667548_667788_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023552279.1|668034_668553_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023552281.1|668549_669092_+|integrase	tyrosine-type recombinase/integrase	integrase	H0USV4	Bacillus_phage	53.3	2.5e-48
WP_014930678.1|669107_669446_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039187805.1|669710_670037_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052198696.1|670033_670396_+	HNH endonuclease	NA	A0A075M5R4	Enterococcus_phage	45.2	1.2e-14
WP_012951321.1|670490_671018_+|terminase	phage terminase small subunit P27 family	terminase	J7KC46	Streptococcus_phage	46.7	6.1e-31
WP_012951322.1|670986_672738_+|terminase	terminase large subunit	terminase	A0A2H4JCI4	uncultured_Caudovirales_phage	50.7	4.1e-156
WP_023552290.1|672744_672945_+	DUF1056 family protein	NA	NA	NA	NA	NA
WP_012951323.1|672947_674183_+|portal	phage portal protein	portal	A0A2H4JAR2	uncultured_Caudovirales_phage	42.1	3.6e-82
WP_012951324.1|674179_674746_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1D6Z2A7	Staphylococcus_phage	52.2	1.0e-44
674290:674306	attR	TAAAGAAATCATTTCCC	NA	NA	NA	NA
WP_012951325.1|674809_675979_+|capsid	phage major capsid protein	capsid	A0A060AI54	Enterococcus_phage	38.1	2.1e-44
WP_012951326.1|676027_676366_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JB77	uncultured_Caudovirales_phage	37.8	8.1e-13
WP_012951327.1|676335_676656_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_012951328.1|676649_677015_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_014930680.1|677017_677416_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012951330.1|677436_678012_+|tail	major tail protein	tail	M1PRQ7	Streptococcus_phage	42.4	1.2e-32
WP_012951331.1|678101_678449_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014930682.1|678645_682845_+|tail	phage tail tape measure protein	tail	J7KDT4	Streptococcus_phage	33.0	1.2e-12
WP_014930683.1|682837_685081_+|tail	phage tail family protein	tail	A0A059T682	Listeria_phage	29.4	1.2e-56
WP_031694739.1|685086_687378_+|tail	phage tail protein	tail	A0A059T7Y6	Listeria_phage	37.9	4.4e-134
WP_023552297.1|687370_688432_+	hypothetical protein	NA	A0A059T7R4	Listeria_phage	51.0	1.2e-94
WP_003722523.1|688470_688836_+	hypothetical protein	NA	Q9T1A0	Listeria_phage	100.0	7.4e-12
WP_031694741.1|688848_689133_+|holin	holin	holin	A8ASL4	Listeria_phage	94.6	3.5e-41
>prophage 3
NZ_CP029372	Listeria monocytogenes strain 2018TE5305-1-4 chromosome, complete genome	2894782	1136954	1144377	2894782		Hokovirus(33.33%)	8	NA	NA
WP_003721506.1|1136954_1137338_+	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.7	1.4e-16
WP_014600722.1|1137359_1138343_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	35.3	3.1e-12
WP_014930875.1|1138357_1139371_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	32.0	6.0e-11
WP_003721509.1|1139579_1141070_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.7	9.5e-114
WP_003727000.1|1141081_1141906_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.6	9.7e-68
WP_014600724.1|1141918_1142227_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003732712.1|1142287_1142692_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_014600725.1|1142820_1144377_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.1	2.3e-17
>prophage 4
NZ_CP029372	Listeria monocytogenes strain 2018TE5305-1-4 chromosome, complete genome	2894782	1275630	1335070	2894782	protease,tRNA	Bacillus_virus(16.67%)	57	NA	NA
WP_060934467.1|1275630_1276710_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|1276850_1277246_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|1277396_1277612_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010989719.1|1277730_1278264_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003732795.1|1278281_1278947_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014600790.1|1279208_1280147_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1280261_1281545_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1281729_1282989_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_009924620.1|1283107_1283674_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_009924619.1|1283708_1284278_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003723889.1|1284379_1284922_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003723890.1|1284931_1285795_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003723891.1|1285791_1286577_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	39.2	3.0e-26
WP_003723892.1|1286710_1287571_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_014600791.1|1287842_1289921_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	4.1e-107
WP_009924616.1|1289983_1291288_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_009911635.1|1291570_1292473_+	tyrosine recombinase XerC	NA	A0A097EYL9	Mycobacterium_phage	28.6	1.2e-13
WP_003724001.1|1292493_1293033_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_010989722.1|1293046_1294456_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.7	4.9e-43
WP_003726695.1|1294476_1295256_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003724129.1|1295358_1295778_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1295799_1296111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009932949.1|1296113_1296986_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_014600792.1|1297027_1297624_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003732802.1|1297781_1298189_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003723731.1|1298369_1300337_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	6.7e-123
WP_010989723.1|1300333_1302793_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	4.7e-102
WP_009913867.1|1302875_1303343_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_014600793.1|1303669_1305403_+	LapB repeat-containing protein	NA	NA	NA	NA	NA
WP_012951575.1|1305734_1307531_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_012951576.1|1307564_1309433_-	peptidoglycan O-acetyltransferase OatA	NA	B5WZU0	Pseudomonas_phage	31.9	6.5e-43
WP_003723737.1|1309645_1310344_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	32.4	1.3e-12
WP_003723738.1|1310576_1312253_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_014600794.1|1312378_1313296_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1313418_1313652_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_022741839.1|1313762_1314986_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010989728.1|1314978_1316205_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1316408_1316777_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|1316847_1318182_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_014600796.1|1318325_1319621_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	61.6	2.4e-145
WP_003723437.1|1319664_1320186_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003723438.1|1320216_1320831_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003723439.1|1320988_1321318_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003723440.1|1321409_1321637_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003732809.1|1321783_1323778_+	transketolase	NA	NA	NA	NA	NA
WP_003723442.1|1323998_1324238_+	YneF family protein	NA	NA	NA	NA	NA
WP_014600797.1|1324288_1325131_-	DUF2785 domain-containing protein	NA	NA	NA	NA	NA
WP_014600798.1|1325149_1325881_-	methyltransferase domain-containing protein	NA	A0A1X9I6N4	Streptococcus_phage	58.7	4.4e-80
WP_003723445.1|1325902_1326409_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	4.0e-56
WP_003723446.1|1326418_1327723_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	52.1	9.5e-134
WP_010989732.1|1327712_1328918_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	47.1	4.9e-92
WP_003723449.1|1329561_1330290_+	UMP kinase	NA	NA	NA	NA	NA
WP_003723450.1|1330289_1330847_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_014600799.1|1331076_1331835_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_014600800.1|1331848_1332637_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_014600801.1|1332651_1333794_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_003723454.1|1333807_1335070_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 5
NZ_CP029372	Listeria monocytogenes strain 2018TE5305-1-4 chromosome, complete genome	2894782	1825742	1834028	2894782		Prochlorococcus_phage(33.33%)	8	NA	NA
WP_014600928.1|1825742_1826309_-	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	39.1	1.3e-26
WP_014600929.1|1826305_1827355_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	8.3e-64
WP_003722245.1|1827373_1828801_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_014600930.1|1828785_1831005_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.2	1.0e-159
WP_003733240.1|1830997_1831681_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003722248.1|1831684_1831930_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003733239.1|1831941_1832655_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.7	2.7e-42
WP_014600931.1|1832735_1834028_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.6	5.5e-17
>prophage 6
NZ_CP029372	Listeria monocytogenes strain 2018TE5305-1-4 chromosome, complete genome	2894782	2492688	2500532	2894782		Streptococcus_phage(50.0%)	7	NA	NA
WP_003722604.1|2492688_2493660_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003722605.1|2493667_2494636_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	6.7e-68
WP_010990001.1|2494637_2495513_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	3.2e-08
WP_014601136.1|2495620_2497351_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.3	4.3e-174
WP_003734087.1|2497392_2498454_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_014601137.1|2498470_2499454_-	UDP-glucose 4-epimerase GalE	NA	A0A1V0SG19	Hokovirus	37.2	1.6e-48
WP_003722610.1|2499572_2500532_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
>prophage 7
NZ_CP029372	Listeria monocytogenes strain 2018TE5305-1-4 chromosome, complete genome	2894782	2787926	2797958	2894782		Tupanvirus(33.33%)	6	NA	NA
WP_014601215.1|2787926_2790080_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	34.1	6.7e-44
WP_014601216.1|2790103_2791876_-	DNA helicase RecQ	NA	A0A2K9L3P7	Tupanvirus	37.1	1.1e-79
WP_003722118.1|2792036_2793503_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	8.0e-97
WP_003722119.1|2793788_2794319_-	ADP-ribose-binding protein	NA	A0A0K1L687	Scale_drop_disease_virus	49.3	2.6e-29
WP_014601217.1|2794376_2795987_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.9	7.5e-48
WP_003725314.1|2796503_2797958_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	30.3	1.9e-50
