assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003194405.1_ASM319440v1	NZ_CP021171	Staphylococcus aureus strain CHU15-056 chromosome, complete genome	1	154921-155005	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	TTCTACAGGCAATGCAAGTTGGGGTG	26	1	4	154947-154979|154947-154979|154947-154979|154947-154979	NZ_CP021171.1_1345494-1345526|NZ_CP021171.1_789594-789562|NZ_CP021171.1_789653-789621|NZ_CP021171.1_1433873-1433841	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|402aa|up_9|NZ_CP021171.1_144066_145272_+,NA|68aa|down_0|NZ_CP021171.1_155066_155270_-	NA|402aa|up_9|NZ_CP021171.1_144066_145272_+	NA	NA|402aa|up_8|NZ_CP021171.1_145272_146478_+	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|186aa|up_7|NZ_CP021171.1_146488_147046_+	COG2148, WcaJ, Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis, outer membrane]	NA|296aa|up_6|NZ_CP021171.1_147045_147933_+	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs	NA|421aa|up_5|NZ_CP021171.1_147986_149249_+	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|382aa|up_4|NZ_CP021171.1_149325_150471_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|109aa|up_3|NZ_CP021171.1_150535_150862_-	PRK13313, PRK13313, staphylobilin-forming heme oxygenase IsdI	NA|128aa|up_2|NZ_CP021171.1_150868_151252_-	pfam04304, DUF454, Protein of unknown function (DUF454)	NA|496aa|up_1|NZ_CP021171.1_151678_153166_+	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like	NA|320aa|up_0|NZ_CP021171.1_153812_154772_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|68aa|down_0|NZ_CP021171.1_155066_155270_-	NA	NA|171aa|down_1|NZ_CP021171.1_155448_155961_+	pfam14026, DUF4242, Protein of unknown function (DUF4242)	NA|247aa|down_2|NZ_CP021171.1_156302_157043_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|324aa|down_3|NZ_CP021171.1_157056_158028_+	cd13553, PBP2_NrtA_CpmA_like, Substrate binding domain of ABC-type nitrate/bicarbonate transporters, a member of the type 2 periplasmic binding fold superfamily	NA|254aa|down_4|NZ_CP021171.1_158024_158786_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|344aa|down_5|NZ_CP021171.1_158798_159830_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|120aa|down_6|NZ_CP021171.1_160046_160406_+	COG5609, COG5609, Uncharacterized conserved protein [Function unknown]	NA|342aa|down_7|NZ_CP021171.1_160579_161605_+	PRK07574, PRK07574, NAD-dependent formate dehydrogenase	NA|417aa|down_8|NZ_CP021171.1_161990_163241_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|2392aa|down_9|NZ_CP021171.1_163687_170863_+	PRK12467, PRK12467, peptide synthase; Provisional
GCF_003194405.1_ASM319440v1	NZ_CP021171	Staphylococcus aureus strain CHU15-056 chromosome, complete genome	2	394707-394808	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|70aa|up_9|NZ_CP021171.1_384747_384957_-,NA|128aa|up_7|NZ_CP021171.1_385781_386165_-,NA|33aa|up_1|NZ_CP021171.1_392412_392511_+,NA|221aa|down_1|NZ_CP021171.1_395898_396561_-,NA|179aa|down_9|NZ_CP021171.1_403675_404212_-	NA|70aa|up_9|NZ_CP021171.1_384747_384957_-	NA	NA|194aa|up_8|NZ_CP021171.1_385134_385716_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|128aa|up_7|NZ_CP021171.1_385781_386165_-	NA	NA|209aa|up_6|NZ_CP021171.1_386434_387061_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|508aa|up_5|NZ_CP021171.1_387504_389028_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_4|NZ_CP021171.1_389043_389613_-	TIGR03137, AhpC, peroxiredoxin	NA|252aa|up_3|NZ_CP021171.1_390104_390860_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|463aa|up_2|NZ_CP021171.1_390939_392328_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|33aa|up_1|NZ_CP021171.1_392412_392511_+	NA	NA|440aa|up_0|NZ_CP021171.1_393174_394494_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|319aa|down_0|NZ_CP021171.1_394824_395781_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|221aa|down_1|NZ_CP021171.1_395898_396561_-	NA	NA|136aa|down_2|NZ_CP021171.1_396703_397111_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|NZ_CP021171.1_397623_398202_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|NZ_CP021171.1_398201_399470_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|NZ_CP021171.1_399507_400974_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|NZ_CP021171.1_400998_402540_+	PRK00074, guaA, GMP synthase; Reviewed	NA|37aa|down_7|NZ_CP021171.1_402844_402955_-	PRK14751, PRK14751, tetracycline resistance determinant leader peptide; Provisional	NA|26aa|down_8|NZ_CP021171.1_403485_403563_+	PRK00074, guaA, GMP synthase; Reviewed	NA|179aa|down_9|NZ_CP021171.1_403675_404212_-	NA
GCF_003194405.1_ASM319440v1	NZ_CP021171	Staphylococcus aureus strain CHU15-056 chromosome, complete genome	3	784004-784082	3	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,RT,WYL	Unclear	TGTAGAATTTCTTTTCGAAATTCT	24	1	2	784028-784058|784028-784058	NZ_CP021171.1_278148-278118|NZ_CP021171.1_278093-278063	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,RT,WYL	NA|35aa|up_7|NZ_CP021171.1_774887_774992_+,NA|36aa|up_5|NZ_CP021171.1_776417_776525_+,NA	NA|191aa|up_9|NZ_CP021171.1_771328_771901_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|844aa|up_8|NZ_CP021171.1_772314_774846_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|35aa|up_7|NZ_CP021171.1_774887_774992_+	NA	NA|370aa|up_6|NZ_CP021171.1_775153_776264_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|36aa|up_5|NZ_CP021171.1_776417_776525_+	NA	NA|280aa|up_4|NZ_CP021171.1_776672_777512_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_3|NZ_CP021171.1_777685_778336_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_2|NZ_CP021171.1_778332_778569_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_1|NZ_CP021171.1_778837_780823_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_0|NZ_CP021171.1_780830_783677_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|down_0|NZ_CP021171.1_784340_785273_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|down_1|NZ_CP021171.1_785278_786118_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|down_2|NZ_CP021171.1_786125_786611_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|down_3|NZ_CP021171.1_786618_788058_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|down_4|NZ_CP021171.1_788124_789060_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_5|NZ_CP021171.1_790004_790916_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_6|NZ_CP021171.1_790912_791908_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_7|NZ_CP021171.1_792018_792963_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_8|NZ_CP021171.1_793526_794114_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|down_9|NZ_CP021171.1_794356_795259_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
GCF_003194405.1_ASM319440v1	NZ_CP021171	Staphylococcus aureus strain CHU15-056 chromosome, complete genome	4	833116-833197	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	1	833140-833173	NZ_CP021171.1_1345526-1345493	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|38aa|up_1|NZ_CP021171.1_832018_832132_+,NA	NA|206aa|up_9|NZ_CP021171.1_826872_827490_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_8|NZ_CP021171.1_827644_828139_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_7|NZ_CP021171.1_828537_828960_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_6|NZ_CP021171.1_829107_829824_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_5|NZ_CP021171.1_829906_830446_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_4|NZ_CP021171.1_830596_830917_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_3|NZ_CP021171.1_831060_831417_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_2|NZ_CP021171.1_831574_831955_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|38aa|up_1|NZ_CP021171.1_832018_832132_+	NA	NA|293aa|up_0|NZ_CP021171.1_832133_833012_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|down_0|NZ_CP021171.1_833809_834196_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|NZ_CP021171.1_834188_834485_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|NZ_CP021171.1_834734_835760_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|NZ_CP021171.1_835752_836448_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_4|NZ_CP021171.1_836465_837287_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|65aa|down_5|NZ_CP021171.1_837640_837835_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_6|NZ_CP021171.1_838068_838920_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|254aa|down_7|NZ_CP021171.1_839247_840009_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|436aa|down_8|NZ_CP021171.1_840106_841414_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|417aa|down_9|NZ_CP021171.1_841519_842770_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily
GCF_003194405.1_ASM319440v1	NZ_CP021171	Staphylococcus aureus strain CHU15-056 chromosome, complete genome	5	1133941-1134026	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	AAAGTCAGCATACAAAAATGTGCAAGTTGG	30	1	2	1133971-1133996|1133971-1133996	NZ_CP021171.1_796909-796884|NZ_CP021171.1_796965-796940	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|56aa|up_5|NZ_CP021171.1_1129533_1129701_+,NA|169aa|up_2|NZ_CP021171.1_1131663_1132170_+,NA|62aa|down_0|NZ_CP021171.1_1134192_1134378_-,NA|78aa|down_1|NZ_CP021171.1_1134999_1135233_-,NA|49aa|down_4|NZ_CP021171.1_1138861_1139008_+,NA|75aa|down_5|NZ_CP021171.1_1138964_1139189_+	NA|272aa|up_9|NZ_CP021171.1_1126459_1127275_+	PRK08640, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|267aa|up_8|NZ_CP021171.1_1127510_1128311_+	PRK00865, PRK00865, glutamate racemase; Provisional	NA|196aa|up_7|NZ_CP021171.1_1128322_1128910_+	PRK14822, PRK14822, XTP/dITP diphosphatase	NA|168aa|up_6|NZ_CP021171.1_1128902_1129406_+	COG0622, COG0622, Predicted phosphoesterase [General function prediction only]	NA|56aa|up_5|NZ_CP021171.1_1129533_1129701_+	NA	NA|110aa|up_4|NZ_CP021171.1_1129894_1130224_+	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal	NA|134aa|up_3|NZ_CP021171.1_1130592_1130994_-	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed	NA|169aa|up_2|NZ_CP021171.1_1131663_1132170_+	NA	NA|166aa|up_1|NZ_CP021171.1_1132429_1132927_+	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal	NA|117aa|up_0|NZ_CP021171.1_1133076_1133427_+	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN	NA|62aa|down_0|NZ_CP021171.1_1134192_1134378_-	NA	NA|78aa|down_1|NZ_CP021171.1_1134999_1135233_-	NA	NA|440aa|down_2|NZ_CP021171.1_1135751_1137071_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|320aa|down_3|NZ_CP021171.1_1137229_1138189_-	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|49aa|down_4|NZ_CP021171.1_1138861_1139008_+	NA	NA|75aa|down_5|NZ_CP021171.1_1138964_1139189_+	NA	NA|239aa|down_6|NZ_CP021171.1_1139678_1140395_-	PRK13350, PRK13350, superantigen-like protein; Reviewed	NA|242aa|down_7|NZ_CP021171.1_1140502_1141228_-	PRK13349, PRK13349, superantigen-like protein; Reviewed	NA|242aa|down_8|NZ_CP021171.1_1141322_1142048_-	PRK13043, PRK13043, superantigen-like protein; Reviewed	NA|334aa|down_9|NZ_CP021171.1_1142485_1143487_+	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional
GCF_003194405.1_ASM319440v1	NZ_CP021171	Staphylococcus aureus strain CHU15-056 chromosome, complete genome	6	2041828-2041909	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	GGCCCCCACCCCAACTTACATTGT	24	1	5	2041852-2041885|2041852-2041885|2041852-2041885|2041852-2041885|2041852-2041885	NZ_CP021171.1_784003-784036|NZ_CP021171.1_1133785-1133752|NZ_CP021171.1_1737272-1737239|NZ_CP021171.1_1349867-1349900|NZ_CP021171.1_2732756-2732789	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|73aa|up_9|NZ_CP021171.1_2032411_2032630_-,NA|65aa|up_8|NZ_CP021171.1_2032660_2032855_-,NA|58aa|up_6|NZ_CP021171.1_2033674_2033848_+,NA|61aa|up_5|NZ_CP021171.1_2034835_2035018_+,NA	NA|73aa|up_9|NZ_CP021171.1_2032411_2032630_-	NA	NA|65aa|up_8|NZ_CP021171.1_2032660_2032855_-	NA	NA|251aa|up_7|NZ_CP021171.1_2032871_2033624_-	COG3561, COG3561, Phage anti-repressor protein [Transcription]	NA|58aa|up_6|NZ_CP021171.1_2033674_2033848_+	NA	NA|61aa|up_5|NZ_CP021171.1_2034835_2035018_+	NA	NA|155aa|up_4|NZ_CP021171.1_2035175_2035640_+	PRK08119, PRK08119, flagellar motor switch protein; Validated	NA|346aa|up_3|NZ_CP021171.1_2035698_2036736_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|339aa|up_2|NZ_CP021171.1_2037854_2038871_-	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|352aa|up_1|NZ_CP021171.1_2038892_2039948_-	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|408aa|up_0|NZ_CP021171.1_2040383_2041607_+	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed	NA|436aa|down_0|NZ_CP021171.1_2042050_2043358_+	TIGR00933, Trk_system_potassium_uptake_protein_trkH	NA|539aa|down_1|NZ_CP021171.1_2044046_2045663_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|95aa|down_2|NZ_CP021171.1_2045738_2046023_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|248aa|down_3|NZ_CP021171.1_2046197_2046941_+	pfam02517, Abi, CAAX protease self-immunity	NA|420aa|down_4|NZ_CP021171.1_2046965_2048225_-	PRK10819, PRK10819, transport protein TonB; Provisional	NA|209aa|down_5|NZ_CP021171.1_2048421_2049048_+	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|262aa|down_6|NZ_CP021171.1_2049408_2050194_+	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|45aa|down_7|NZ_CP021171.1_2050793_2050928_-	PRK14752, PRK14752, delta-lysin family phenol-soluble modulin	NA|188aa|down_8|NZ_CP021171.1_2051163_2051727_+	COG4512, AgrB, Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide [Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Transcription]	NA|48aa|down_9|NZ_CP021171.1_2051729_2051873_+	smart00794, AgrD, Staphylococcal AgrD protein
GCF_003194405.1_ASM319440v1	NZ_CP021171	Staphylococcus aureus strain CHU15-056 chromosome, complete genome	7	2171109-2171189	7	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,RT,WYL	Type I-A	CAACTTTAGTTGTTAGGGGCTCTT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|77aa|up_5|NZ_CP021171.1_2165983_2166214_-,NA|364aa|up_0|NZ_CP021171.1_2170000_2171092_+,NA|35aa|down_0|NZ_CP021171.1_2171524_2171629_-,NA|53aa|down_2|NZ_CP021171.1_2172308_2172467_+	NA|237aa|up_9|NZ_CP021171.1_2161594_2162305_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP021171.1_2162425_2162869_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP021171.1_2163068_2163482_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP021171.1_2163938_2165312_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP021171.1_2165983_2166214_-	NA	NA|313aa|up_4|NZ_CP021171.1_2166244_2167183_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP021171.1_2167618_2168284_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP021171.1_2168435_2168756_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|326aa|up_1|NZ_CP021171.1_2168757_2169735_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP021171.1_2170000_2171092_+	NA	NA|35aa|down_0|NZ_CP021171.1_2171524_2171629_-	NA	NA|57aa|down_1|NZ_CP021171.1_2172145_2172316_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|53aa|down_2|NZ_CP021171.1_2172308_2172467_+	NA	NA|286aa|down_3|NZ_CP021171.1_2173124_2173982_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_4|NZ_CP021171.1_2174049_2174832_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_5|NZ_CP021171.1_2175063_2176869_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_6|NZ_CP021171.1_2177549_2179088_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_7|NZ_CP021171.1_2179122_2181255_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_8|NZ_CP021171.1_2181266_2181701_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_9|NZ_CP021171.1_2181700_2182807_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional
GCF_003194405.1_ASM319440v1	NZ_CP021171	Staphylococcus aureus strain CHU15-056 chromosome, complete genome	8	2290851-2290931	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	TCTATGTTGGGGCCCCGCCAACTTG	25	1	12	2290876-2290906|2290876-2290906|2290876-2290906|2290876-2290906|2290876-2290906|2290876-2290906|2290876-2290906|2290876-2290906|2290876-2290906|2290876-2290906|2290876-2290906|2290876-2290906	NZ_CP021171.1_796806-796836|NZ_CP021171.1_56435-56465|NZ_CP021171.1_354480-354450|NZ_CP021171.1_617738-617708|NZ_CP021171.1_797030-797060|NZ_CP021171.1_1036747-1036777|NZ_CP021171.1_1139383-1139353|NZ_CP021171.1_1345482-1345452|NZ_CP021171.1_1433885-1433915|NZ_CP021171.1_1630038-1630008|NZ_CP021171.1_2280075-2280105|NZ_CP021171.1_2457108-2457138	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|55aa|up_9|NZ_CP021171.1_2281384_2281549_+,NA|106aa|up_8|NZ_CP021171.1_2281793_2282111_+,NA|84aa|up_5|NZ_CP021171.1_2287232_2287484_+,NA|62aa|up_0|NZ_CP021171.1_2290623_2290809_+,NA	NA|55aa|up_9|NZ_CP021171.1_2281384_2281549_+	NA	NA|106aa|up_8|NZ_CP021171.1_2281793_2282111_+	NA	NA|1056aa|up_7|NZ_CP021171.1_2282294_2285462_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|NZ_CP021171.1_2285578_2286844_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|NZ_CP021171.1_2287232_2287484_+	NA	NA|255aa|up_4|NZ_CP021171.1_2287475_2288240_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|NZ_CP021171.1_2288401_2288842_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NZ_CP021171.1_2288834_2290046_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NZ_CP021171.1_2290147_2290498_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|62aa|up_0|NZ_CP021171.1_2290623_2290809_+	NA	NA|341aa|down_0|NZ_CP021171.1_2291074_2292097_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NZ_CP021171.1_2292116_2292716_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NZ_CP021171.1_2292722_2292956_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NZ_CP021171.1_2292961_2293408_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NZ_CP021171.1_2293421_2293907_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NZ_CP021171.1_2293903_2295163_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NZ_CP021171.1_2295225_2295720_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NZ_CP021171.1_2295721_2296228_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NZ_CP021171.1_2296258_2297263_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NZ_CP021171.1_2297432_2298038_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
