The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP029804	Erysipelothrix rhusiopathiae strain ML101 chromosome, complete genome	1854248	623199	662717	1854248	tail,holin,capsid,portal,protease,integrase,terminase	Erysipelothrix_phage(21.74%)	48	627116:627140	663476:663500
WP_013852765.1|623199_623964_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003773236.1|623968_624538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852766.1|624530_625259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003773238.1|625356_625554_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050921054.1|625936_626221_-	Ltp family lipoprotein	NA	A0A097BY93	Leuconostoc_phage	59.2	3.5e-09
627116:627140	attL	TTTGTATGGCAGATGTATGGCAGGA	NA	NA	NA	NA
WP_013852768.1|627141_628356_-|integrase	site-specific integrase	integrase	Q8SBN2	Clostridium_phage	27.4	2.6e-24
WP_062810479.1|628438_629467_-	Abi family protein	NA	A0A1Q1PVS3	Staphylococcus_phage	31.3	1.0e-29
WP_013852770.1|629577_629940_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013852771.1|630066_630483_-	helix-turn-helix transcriptional regulator	NA	H0UST7	Bacillus_phage	31.9	6.3e-07
WP_013852772.1|630611_630818_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_013852773.1|630855_631110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852775.1|631223_631604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062810478.1|631651_632254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852777.1|632246_632465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852778.1|632451_633732_+	AAA family ATPase	NA	A0A097BY67	Enterococcus_phage	62.7	1.1e-142
WP_050921055.1|633734_634814_+	ATP-binding protein	NA	A0A097BY66	Enterococcus_phage	48.4	1.1e-87
WP_062810477.1|634831_635290_+	DUF669 domain-containing protein	NA	A0A0K2CZ91	Paenibacillus_phage	49.7	3.3e-33
WP_013852781.1|635293_636883_+	DEAD/DEAH box helicase	NA	A0A0K2CZF8	Paenibacillus_phage	73.5	1.2e-228
WP_062810476.1|637055_637547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013852783.1|637632_639906_+	AAA family ATPase	NA	Q5YA88	Bacillus_phage	62.4	6.4e-271
WP_013852784.1|640381_640642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145958531.1|640655_640901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852786.1|640893_641298_+	RusA family crossover junction endodeoxyribonuclease	NA	Q5YA86	Bacillus_phage	58.8	6.1e-39
WP_144742865.1|641493_641904_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158308987.1|642102_642240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_189283563.1|642208_642736_+	DUF2335 domain-containing protein	NA	NA	NA	NA	NA
WP_013852791.1|642916_644413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852793.1|644824_645289_+	hypothetical protein	NA	A0A0A7RTX1	Clostridium_phage	46.3	6.5e-29
WP_013852794.1|645269_646643_+|terminase	phage terminase large subunit	terminase	A0A2H4J7G6	uncultured_Caudovirales_phage	52.4	7.9e-131
WP_013852795.1|646642_647971_+|portal	phage portal protein	portal	A0A2H4JDT5	uncultured_Caudovirales_phage	36.6	2.3e-66
WP_062810475.1|647948_649532_+|capsid	minor capsid protein	capsid	A0A141E1Y0	Streptococcus_phage	33.0	5.3e-30
WP_013852798.1|649506_649731_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852799.1|649912_650524_+	DUF4355 domain-containing protein	NA	NA	NA	NA	NA
WP_013852800.1|650528_651485_+	hypothetical protein	NA	D2IYW7	Enterococcus_phage	43.5	2.4e-57
WP_013852801.1|651504_651870_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041690528.1|651862_652180_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852803.1|652170_652695_+	HK97 gp10 family phage protein	NA	A0A060QNE4	Streptococcus_phage	33.6	1.6e-15
WP_013852804.1|652691_653006_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852805.1|653065_653494_+|tail	major tail protein	tail	R9TNE5	Paenibacillus_phage	36.0	2.1e-13
WP_013852806.1|653509_653869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852807.1|654012_654204_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852808.1|654200_656801_+	tape measure protein	NA	A0A2P1JTW1	Anoxybacillus_phage	35.3	2.7e-31
WP_013852809.1|656811_657180_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852810.1|657179_658787_+	hypothetical protein	NA	A0A0H4TFF7	Erysipelothrix_phage	76.6	5.9e-53
WP_013852811.1|658786_660829_+	phage structural protein	NA	A0A0H4TI29	Erysipelothrix_phage	95.9	0.0e+00
WP_013852812.1|660841_661081_+	hypothetical protein	NA	A0A0H4U092	Erysipelothrix_phage	97.5	5.9e-34
WP_013852813.1|661073_661445_+|holin	phage holin family protein	holin	A0A0H4TEZ1	Erysipelothrix_phage	100.0	9.4e-63
WP_062810474.1|662486_662717_+	hypothetical protein	NA	A0A0H4TFF4	Erysipelothrix_phage	97.4	5.3e-32
663476:663500	attR	TTTGTATGGCAGATGTATGGCAGGA	NA	NA	NA	NA
>prophage 2
NZ_CP029804	Erysipelothrix rhusiopathiae strain ML101 chromosome, complete genome	1854248	668377	747171	1854248	transposase,bacteriocin,tRNA,protease,integrase	Tupanvirus(15.38%)	59	727903:727919	752333:752349
WP_003773253.1|668377_669100_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_003773604.1|669221_670160_+|transposase	IS30-like element ISErh4 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	28.5	4.1e-22
WP_013852820.1|670200_671505_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_003773255.1|671655_672039_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852821.1|672028_673171_+	pyridoxal phosphate-dependent aminotransferase	NA	A0A1X7QHI1	Faustovirus	25.4	4.6e-07
WP_003773257.1|673326_674250_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_003773259.1|674252_675137_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_003773260.1|675188_675902_+	UMP kinase	NA	NA	NA	NA	NA
WP_003773261.1|675904_676450_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_003773262.1|676452_677133_+	isoprenyl transferase	NA	A0A076FI83	Aureococcus_anophage	25.0	9.6e-13
WP_013852823.1|677134_677902_+	phosphatidate cytidylyltransferase	NA	A0A2K9L268	Tupanvirus	26.8	3.7e-05
WP_013852824.1|677911_678976_+|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003773265.1|679047_679491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852825.1|679503_680163_-	hemolysin III family protein	NA	NA	NA	NA	NA
WP_013852826.1|680315_682112_+	glucosaminidase domain-containing protein	NA	NA	NA	NA	NA
WP_062810473.1|682121_683606_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003773269.1|683745_684207_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003773270.1|684209_684716_+	DnaD domain protein	NA	NA	NA	NA	NA
WP_013852828.1|684712_685333_+	endonuclease III	NA	NA	NA	NA	NA
WP_013852829.1|685329_686652_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_013852830.1|686652_687669_+	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_013852831.1|687665_688793_+	alanine racemase	NA	NA	NA	NA	NA
WP_013852832.1|688854_691911_-	penicillin-binding protein	NA	NA	NA	NA	NA
WP_013852833.1|691907_692489_-	Holliday junction resolvase RecU	NA	R9TMF8	Paenibacillus_phage	32.8	3.7e-21
WP_013852834.1|692615_692930_+	DivIVA domain-containing protein	NA	NA	NA	NA	NA
WP_003773281.1|694324_694918_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_013852836.1|694949_695975_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	62.1	5.2e-119
WP_013852837.1|696086_697643_+	ribonuclease Y	NA	NA	NA	NA	NA
WP_003773287.1|697642_698407_+	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA	NA
WP_003773289.1|698550_700209_+	ribonuclease J	NA	NA	NA	NA	NA
WP_062810472.1|700222_702571_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.1	1.2e-81
WP_110899873.1|702742_708733_+	Cna B-type domain-containing protein	NA	NA	NA	NA	NA
WP_062810471.1|708969_711342_+	Cna B-type domain-containing protein	NA	NA	NA	NA	NA
WP_013852841.1|711410_713096_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	30.7	5.9e-11
WP_013852842.1|713389_713614_+	YneF family protein	NA	NA	NA	NA	NA
WP_013852843.1|714371_715367_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003773302.1|715480_715918_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_013852844.1|715914_717033_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_013852845.1|717016_717745_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_013852846.1|717761_719897_+	ATP-dependent RecD-like DNA helicase	NA	A0A1P8DII4	Virus_Rctr197k	32.7	3.9e-36
WP_013852847.1|720054_720462_-	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_013852848.1|720558_721989_+	beta-Ala-His dipeptidase	NA	NA	NA	NA	NA
WP_013852849.1|722100_722574_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_013852850.1|722625_723486_+	DUF5596 domain-containing protein	NA	NA	NA	NA	NA
WP_013852851.1|723557_724226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013852852.1|725090_725633_+	replication initiator protein A	NA	A0A286QNA4	Streptococcus_phage	45.2	1.3e-20
WP_003773326.1|726881_728168_-	hypothetical protein	NA	NA	NA	NA	NA
727903:727919	attL	ATATTTTTATCTTGTAT	NA	NA	NA	NA
WP_041690530.1|728169_729270_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003773332.1|729262_730117_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	36.1	1.3e-30
WP_062810469.1|730118_731696_-	ABC transporter ATP-binding protein/permease	NA	A0A1V0SKJ1	Klosneuvirus	26.8	3.7e-07
WP_013852855.1|731748_731937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003773336.1|731929_732199_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013852856.1|732213_733209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013852857.1|733205_734594_-	radical SAM protein	NA	NA	NA	NA	NA
WP_003773349.1|736750_737320_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062810466.1|737389_739573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081484478.1|739765_740077_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A0C5AEB1	Paenibacillus_phage	59.2	6.5e-17
WP_003773353.1|740077_740446_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_110899918.1|745065_747171_+|bacteriocin	bacteriocin transporter	bacteriocin	NA	NA	NA	NA
752333:752349	attR	ATACAAGATAAAAATAT	NA	NA	NA	NA
>prophage 3
NZ_CP029804	Erysipelothrix rhusiopathiae strain ML101 chromosome, complete genome	1854248	1358277	1387456	1854248	integrase	Streptococcus_phage(96.3%)	32	1360911:1360925	1378959:1378973
WP_000420682.1|1358277_1358592_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|1358607_1358994_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_062810427.1|1359022_1360408_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	99.8	5.5e-265
WP_000879507.1|1360410_1360563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|1360585_1361791_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
1360911:1360925	attL	TCTATTCTTATTCAG	NA	NA	NA	NA
WP_001009056.1|1361833_1362055_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|1362171_1362669_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|1362643_1363150_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|1363133_1365581_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000804748.1|1365583_1367761_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000769868.1|1367757_1368759_+	bifunctional lysozyme/C40 family peptidase	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224318.1|1368755_1369688_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_001814923.1|1369932_1370049_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_189283565.1|1370942_1371983_+	elongation factor G	NA	A0A1S5SF82	Streptococcus_phage	98.3	1.7e-197
WP_000336323.1|1372101_1372269_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_001227347.1|1372328_1372682_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000804885.1|1373186_1373609_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|1373605_1373836_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|1374296_1374500_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|1374581_1375799_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000582200.1|1376361_1376613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000802831.1|1377274_1377934_-	RibD family protein	NA	A0A1B0RXM8	Streptococcus_phage	100.0	3.1e-125
WP_072387101.1|1378044_1378452_-	WYL domain-containing protein	NA	A0A1B0RXM3	Streptococcus_phage	98.3	1.1e-59
WP_001079938.1|1378424_1378997_-	HTH domain-containing protein	NA	A0A1B0RXM1	Streptococcus_phage	99.5	5.5e-102
1378959:1378973	attR	CTGAATAAGAATAGA	NA	NA	NA	NA
WP_001096887.1|1379272_1380067_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
WP_000627290.1|1380159_1380702_-	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	100.0	8.9e-94
WP_001255864.1|1380698_1381607_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	E4ZFP8	Streptococcus_phage	93.4	2.0e-167
WP_000662263.1|1381639_1382374_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_062810426.1|1382354_1383224_-	nucleotidyltransferase domain-containing protein	NA	A0A1X9I6C9	Streptococcus_phage	90.7	1.5e-151
WP_002303393.1|1383238_1383463_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002294514.1|1385114_1385918_-	lincosamide nucleotidyltransferase Lnu(B)	NA	NA	NA	NA	NA
WP_002294513.1|1385971_1387456_-	ABC-F type ribosomal protection protein Lsa(E)	NA	A0A2H4UUX5	Bodo_saltans_virus	26.0	2.6e-26
>prophage 4
NZ_CP029804	Erysipelothrix rhusiopathiae strain ML101 chromosome, complete genome	1854248	1391034	1404408	1854248		Streptococcus_phage(33.33%)	8	NA	NA
WP_002294505.1|1391034_1391898_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	A0A1X9I6F2	Streptococcus_phage	100.0	8.7e-168
WP_189283555.1|1391930_1392884_-	methyltransferase domain-containing protein	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.1e-136
WP_189283557.1|1392913_1393051_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062810425.1|1393043_1393253_-	helix-turn-helix domain-containing protein	NA	S5MNP8	Brevibacillus_phage	53.1	1.9e-12
WP_062810424.1|1393398_1394055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062810423.1|1394098_1401742_-	DEAD/DEAH box helicase family protein	NA	I3PUW5	Vibrio_phage	37.7	4.5e-276
WP_062810422.1|1401728_1402694_-	DNA (cytosine-5-)-methyltransferase	NA	D2IZY5	Enterococcus_phage	49.0	1.1e-75
WP_062810421.1|1402686_1404408_-	DNA topoisomerase 3	NA	A0A2H4UU47	Bodo_saltans_virus	20.8	3.1e-07
>prophage 5
NZ_CP029804	Erysipelothrix rhusiopathiae strain ML101 chromosome, complete genome	1854248	1730600	1739448	1854248		Streptococcus_phage(33.33%)	8	NA	NA
WP_013853426.1|1730600_1732268_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	43.1	3.5e-125
WP_003774368.1|1732330_1732597_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_003774367.1|1732667_1733123_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_016357484.1|1733119_1734223_-	trypsin-like peptidase domain-containing protein	NA	A0A1B1IRH0	uncultured_Mediterranean_phage	29.2	2.9e-11
WP_013853428.1|1734219_1734948_-	MBL fold metallo-hydrolase	NA	A0A2H4J3R0	uncultured_Caudovirales_phage	30.8	3.4e-24
WP_003774364.1|1734964_1736500_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	44.3	8.0e-07
WP_003774363.1|1736567_1738076_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A2D0ZM66	Rhodococcus_phage	39.0	1.2e-15
WP_003774361.1|1738077_1739448_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	39.0	9.1e-79
