The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP030172	Klebsiella pneumoniae subsp. pneumoniae strain 12208 chromosome, complete genome	5214209	1617577	1624482	5214209	tRNA	Planktothrix_phage(33.33%)	6	NA	NA
WP_004180551.1|1617577_1618441_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
WP_004180550.1|1618451_1619225_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
WP_004151134.1|1619465_1620362_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
WP_004144192.1|1620604_1621966_-|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	94.8	1.8e-207
WP_004175198.1|1622284_1623007_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
WP_004149058.1|1623003_1624482_-	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	8.5e-30
>prophage 2
NZ_CP030172	Klebsiella pneumoniae subsp. pneumoniae strain 12208 chromosome, complete genome	5214209	2634026	2643441	5214209		Escherichia_phage(87.5%)	9	NA	NA
WP_160333886.1|2634026_2635661_+	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	55.8	3.1e-182
WP_004176258.1|2635715_2636981_+	MFS transporter	NA	NA	NA	NA	NA
WP_021440085.1|2637011_2638100_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	99.7	5.2e-210
WP_004176262.1|2638186_2638447_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	98.8	5.4e-41
WP_021440083.1|2638738_2639605_+	class A beta-lactamase SHV-187	NA	A0A077SL40	Escherichia_phage	99.6	1.7e-155
WP_002210513.1|2639625_2640387_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_002903955.1|2640648_2641551_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
WP_063417090.1|2641562_2642828_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.5	3.0e-233
WP_002210516.1|2642820_2643441_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 3
NZ_CP030172	Klebsiella pneumoniae subsp. pneumoniae strain 12208 chromosome, complete genome	5214209	3321530	3330993	5214209	protease,tRNA	Brazilian_cedratvirus(16.67%)	8	NA	NA
WP_004224003.1|3321530_3323252_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
WP_004141853.1|3323278_3323998_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_001040187.1|3324351_3324570_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_002896522.1|3324689_3326969_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
WP_002896520.1|3326999_3327317_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
WP_002896516.1|3327642_3327864_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
WP_032429904.1|3327940_3329881_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	41.4	2.9e-38
WP_002896440.1|3329877_3330993_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
>prophage 4
NZ_CP030172	Klebsiella pneumoniae subsp. pneumoniae strain 12208 chromosome, complete genome	5214209	3811916	3860353	5214209	coat,lysis,tRNA,integrase,head	Cronobacter_phage(23.4%)	67	3810044:3810060	3867568:3867584
3810044:3810060	attL	GTCTGGCGGTGAACCGC	NA	NA	NA	NA
WP_130951467.1|3811916_3812744_-	hypothetical protein	NA	A0A0S1S106	Klebsiella_phage	51.6	4.5e-73
WP_063417025.1|3815582_3818060_-	MoaD/ThiS family protein	NA	F1C5A7	Cronobacter_phage	45.2	1.8e-197
WP_048265765.1|3818046_3818442_-	hypothetical protein	NA	F1C5F2	Cronobacter_phage	55.6	2.1e-36
WP_049185966.1|3818438_3818909_-	hypothetical protein	NA	R9TPR6	Aeromonas_phage	40.4	9.6e-28
WP_063417024.1|3818908_3819385_-	hypothetical protein	NA	A0A2P1MXB5	Escherichia_phage	49.0	2.3e-37
WP_029602700.1|3819430_3819673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063417023.1|3819672_3823113_-	tape measure protein	NA	Q5G8W8	Enterobacteria_phage	46.8	2.2e-153
WP_029884072.1|3823207_3823711_-	hypothetical protein	NA	NA	NA	NA	NA
WP_074160392.1|3823813_3824041_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086556004.1|3824135_3824453_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023328739.1|3824504_3824825_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087662079.1|3825430_3825781_+	hypothetical protein	NA	A0A077K9U2	Edwardsiella_phage	43.8	7.1e-12
WP_061353713.1|3825824_3826277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016528886.1|3826273_3826846_-	SocA family protein	NA	NA	NA	NA	NA
WP_063417021.1|3827156_3827840_-	hypothetical protein	NA	G0ZNE7	Cronobacter_phage	58.8	9.8e-74
WP_048294321.1|3827892_3828645_-	Ig domain-containing protein	NA	G0ZNE6	Cronobacter_phage	41.8	1.7e-42
WP_004151264.1|3828713_3829106_-	hypothetical protein	NA	G0ZNE4	Cronobacter_phage	52.7	5.1e-35
WP_004151265.1|3829102_3829528_-	hypothetical protein	NA	R9TPP7	Aeromonas_phage	47.9	5.1e-28
WP_023301678.1|3829530_3829893_-	hypothetical protein	NA	A0A0M3LSC9	Mannheimia_phage	49.2	3.3e-20
WP_032752624.1|3829892_3830066_-	hypothetical protein	NA	I6R0P9	Salmonella_phage	54.4	5.4e-13
WP_063417020.1|3830065_3830446_-	hypothetical protein	NA	F1C5E2	Cronobacter_phage	55.3	2.4e-29
WP_029884066.1|3830448_3830688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040027496.1|3830720_3831776_-|coat	phage coat protein	coat	A0A291AXD4	Shigella_phage	53.2	2.2e-101
WP_016529582.1|3831772_3832234_-	hypothetical protein	NA	B1GS72	Salmonella_phage	50.3	5.0e-29
WP_063417019.1|3832233_3833589_-	hypothetical protein	NA	F1C5D9	Cronobacter_phage	52.6	9.5e-129
WP_063417018.1|3833940_3834948_-|head	phage head morphogenesis protein	head	F1C5D8	Cronobacter_phage	71.4	5.6e-118
WP_063417017.1|3834874_3836344_-	DUF1073 domain-containing protein	NA	F1C5D7	Cronobacter_phage	56.3	1.4e-149
WP_063417016.1|3836356_3837829_-	hypothetical protein	NA	A0A1W6JNY3	Morganella_phage	82.9	6.9e-250
WP_063417015.1|3837828_3838431_-	hypothetical protein	NA	G8C7P2	Escherichia_phage	80.3	9.3e-76
WP_004178838.1|3838801_3839131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063417014.1|3839236_3839701_-|lysis	lysis protein	lysis	Q76H63	Enterobacteria_phage	74.5	1.8e-55
WP_063417013.1|3839697_3840201_-	lysozyme	NA	M1FJA0	Enterobacteria_phage	79.6	6.1e-73
WP_063417012.1|3840203_3840518_-	hypothetical protein	NA	H6WRZ3	Salmonella_phage	85.1	2.4e-43
WP_063417047.1|3841261_3841951_-	antiterminator	NA	I6PDF8	Cronobacter_phage	53.6	1.2e-55
WP_023283343.1|3841950_3842091_-	YlcG family protein	NA	NA	NA	NA	NA
WP_063417011.1|3842087_3842723_-	NinG family protein	NA	M9NYX8	Enterobacteria_phage	77.5	1.7e-80
WP_074160387.1|3842715_3842886_-	hypothetical protein	NA	G8C7V4	Escherichia_phage	73.2	5.7e-15
WP_059065858.1|3842885_3843341_-	hypothetical protein	NA	K7P7B8	Enterobacteria_phage	69.5	1.0e-55
WP_043906731.1|3843531_3843789_-	DNA polymerase III subunit theta	NA	G8C7V1	Escherichia_phage	76.6	6.4e-26
WP_032428632.1|3843788_3844076_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063417010.1|3844248_3844836_-	ead/Ea22-like family protein	NA	A0A075B8K3	Enterobacteria_phage	48.0	2.0e-30
WP_063417009.1|3844942_3845389_-	hypothetical protein	NA	R9TME7	Aeromonas_phage	36.5	2.9e-10
WP_063417008.1|3845385_3845679_-	hypothetical protein	NA	M1FPD5	Enterobacteria_phage	64.5	1.2e-25
WP_074160390.1|3845678_3847094_-	AAA family ATPase	NA	Q9MCT4	Escherichia_phage	67.1	2.4e-183
WP_074160391.1|3847098_3847950_-	DNA replication protein	NA	F1C5C3	Cronobacter_phage	55.6	3.4e-84
WP_004194002.1|3847990_3848137_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004141720.1|3848223_3848544_-	hypothetical protein	NA	A0A0M4RU01	Salmonella_phage	68.9	3.8e-36
WP_004178811.1|3848583_3848817_-	helix-turn-helix domain-containing protein	NA	A0A2H4FNF3	Salmonella_phage	70.4	3.0e-22
WP_024622727.1|3848921_3849611_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	70.6	1.0e-86
WP_063417005.1|3849911_3850661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032420807.1|3850657_3851485_+	DUF3037 domain-containing protein	NA	NA	NA	NA	NA
WP_019725100.1|3851540_3851744_-	hypothetical protein	NA	A0A192Y6Q5	Salmonella_phage	73.1	1.2e-19
WP_004219883.1|3852053_3852179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008807814.1|3852171_3852378_+	phage encoded cell division inhibitor protein	NA	A0A0M4S6W3	Salmonella_phage	94.1	1.4e-31
WP_063417004.1|3852457_3853426_+	hypothetical protein	NA	M9P0E1	Enterobacteria_phage	91.0	1.8e-65
WP_063417003.1|3853433_3853631_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157829419.1|3853627_3853786_+	hypothetical protein	NA	A0A1R3Y5R4	Salmonella_virus	60.5	1.3e-05
WP_009483856.1|3853782_3854436_+	single-stranded DNA-binding protein	NA	A0A1W6JP21	Morganella_phage	62.3	4.0e-64
WP_063417002.1|3854419_3854710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063417001.1|3854706_3855012_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_063417000.1|3855008_3855662_+	DNA methyltransferase	NA	G8C7S6	Escherichia_phage	87.5	3.9e-112
WP_063416999.1|3855658_3855877_+	TraR/DksA family transcriptional regulator	NA	A0A0N7C211	Escherichia_phage	51.0	1.6e-06
WP_071844011.1|3856034_3856370_+	excisionase family DNA-binding protein	NA	NA	NA	NA	NA
WP_039108810.1|3856246_3857410_+|integrase	site-specific integrase	integrase	G8C7S0	Escherichia_phage	86.8	6.6e-203
WP_004143017.1|3857841_3858708_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	34.8	1.3e-30
WP_004143016.1|3858709_3858922_+	ribosome-associated protein YbcJ	NA	NA	NA	NA	NA
WP_004143010.1|3858967_3860353_-|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	35.4	3.5e-46
3867568:3867584	attR	GCGGTTCACCGCCAGAC	NA	NA	NA	NA
