The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019612	Mycobacterium tuberculosis strain H107 chromosome, complete genome	4418796	2807911	2846183	4418796	capsid,head,protease,integrase,terminase,tRNA	Mycobacterium_phage(30.0%)	47	2836712:2836739	2846336:2846363
WP_003413486.1|2807911_2809990_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2810098_2810326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009938541.1|2810322_2811708_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2812052_2812553_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2812569_2813010_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2813156_2813834_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2813818_2814172_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2814184_2814610_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2814606_2815281_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2815358_2816180_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2816315_2817209_+	universal stress protein TB31.7	NA	NA	NA	NA	NA
WP_003413594.1|2817211_2818030_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2818044_2819226_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2819284_2819716_-	hypoxic response protein Hrp1	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2820229_2821471_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2821780_2822143_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2822489_2823614_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2823615_2824155_+	archease	NA	NA	NA	NA	NA
WP_112612188.1|2824294_2825593_+	RtcB family protein	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2825631_2825913_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2826057_2826543_-	non-heme di-iron catalase	NA	NA	NA	NA	NA
WP_003908019.1|2826569_2826824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031664025.1|2826827_2829164_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2829192_2829435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2829435_2830113_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2830308_2830965_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2831127_2831574_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2831748_2832081_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2832200_2832560_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2832661_2833120_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2833255_2833636_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2833632_2835129_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_003912823.1|2835363_2835555_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
2836712:2836739	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2836845_2837277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2837273_2838272_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2838285_2838750_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003908028.1|2838737_2838989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899411.1|2839159_2840599_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2840606_2841140_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|2841292_2841919_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
WP_003899414.1|2841950_2842274_-	type II toxin-antitoxin system toxin	NA	NA	NA	NA	NA
WP_003899415.1|2842353_2842599_-	type II toxin-antitoxin system antitoxin	NA	NA	NA	NA	NA
WP_031664026.1|2842595_2844023_-	DUF3631 domain-containing protein	NA	NA	NA	NA	NA
WP_003899417.1|2844024_2844417_-	DUF2742 domain-containing protein	NA	NA	NA	NA	NA
WP_003899418.1|2844413_2844674_-	helix-turn-helix domain-containing protein	NA	A0A2P1CHK7	Mycobacterium_phage	64.6	3.0e-15
WP_003900543.1|2844690_2845053_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003899420.1|2845055_2846183_-|integrase	site-specific integrase	integrase	A0A1X9SFC1	Mycobacterium_phage	40.4	1.5e-66
2846336:2846363	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP019612	Mycobacterium tuberculosis strain H107 chromosome, complete genome	4418796	2965672	2988655	4418796	integrase,transposase,tRNA	Burkholderia_virus(50.0%)	24	2980390:2980449	2988647:2990003
WP_003899482.1|2965672_2967052_-|transposase	transposase	transposase	A0A7P9	Microcystis_virus	30.3	9.3e-31
WP_003414146.1|2967051_2967633_-|transposase	IS607-like element IS1602 family transposase	transposase	F9VHY9	Thermus_phage	30.6	5.0e-18
WP_003414147.1|2967834_2968731_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_003414149.1|2968727_2969411_-	4'-phosphopantetheinyl transferase	NA	NA	NA	NA	NA
WP_003414151.1|2969407_2970382_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_003900574.1|2970526_2971090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003414155.1|2971089_2972778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003414157.1|2972781_2973108_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003414158.1|2973238_2973868_+	DUF3558 family protein	NA	NA	NA	NA	NA
WP_003899485.1|2973886_2975536_+	CocE/NonD family hydrolase	NA	NA	NA	NA	NA
WP_044108447.1|2975679_2975994_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA	NA
WP_003901465.1|2975977_2976208_-	antitoxin MazE	NA	NA	NA	NA	NA
WP_003911993.1|2977483_2977759_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_003917684.1|2977934_2978189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938577.1|2978336_2978741_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003414184.1|2978737_2978929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899488.1|2979127_2980282_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
2980390:2980449	attL	TGAACCGCCCCGGCATGTCCGGAGACTCCAGTTCTTGGAAAGGATGGGGTCATGTCAGGT	NA	NA	NA	NA
WP_087902221.1|2980440_2981701_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899489.1|2981873_2982131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003414190.1|2982235_2982547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003414195.1|2982966_2983575_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003414198.1|2983645_2985055_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_003899491.1|2985051_2985864_+	ExeA family protein	NA	NA	NA	NA	NA
WP_087902221.1|2987393_2988655_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
2988647:2990003	attR	ACCTGACATGACCCCATCCTTTCCAAGAACTGGAGTCTCCGGACATGCCGGGGCGGTTCAGGGTTTTGGGTCTGACGACTCGCGGCGAGCACGTCTCACCCAGCAGGCGGTGAGGTTGGGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACGGACGAGCTGGACCGCATCAGCGATGCTGAGCTGAGGGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTGTCTCAATCGTGCCGTCTGCGGTGACACGCTCCAAGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCGACGATTGGGACATCGACATCGACGCGATCGTCGACGAGTTTCCGTCCTCTCTCGGGGTTTTGGGTCTGACGACGTGATCTTCTCTCCTGGCGAGGTCAAGGAAATCGATGTGGAGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCACCAGGATCAGCGCCAAGCCAGTTAGCGCAATCCAGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTCCCGGACCATCTGCAGCTCGCCCGGGTCCATGCGGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCGGAGTCATCCGCGCGGGCCGGCGCGATTGTTGCCGGGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTGGCGATTTACGACGCTGACGGGAACTCGTGCGAATGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGATCCGCGAAATTCACTGCGCGTTATTCAAGGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGAGCCGACCATCCGCATCACACCGAAAGGGTTGGCGCAAGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTCGGACAGCATCTCCCCGGGCGGGCAGCAGATATCCCATGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCGACCCGTGGCCGCCAGGTTGCCGCCGCCGTTGCTCACCTGGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGGAAGTCAACTAGAGCGGGTGTCGAACGCTGCCCGGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACATGCGAATCCGCTGTCAGCACATGGGATTCCGAGTGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTAGGCGGCCCCGGCGAGGCTGGGGGCGGTTTCACGCGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCAGCGCAGACGGCAGCCCCGAGTACTCGCTCTCCTCAGGTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACAGGCTGAAATTGAAGCCGGAAATGACGACG	NA	NA	NA	NA
>prophage 3
NZ_CP019612	Mycobacterium tuberculosis strain H107 chromosome, complete genome	4418796	3580692	3627098	4418796	transposase,tRNA,protease	Klosneuvirus(25.0%)	24	NA	NA
WP_009937401.1|3580692_3580854_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3580875_3582405_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3582337_3583276_-	sigma-70 family RNA polymerase sigma factor SigJ	NA	NA	NA	NA	NA
WP_003902446.1|3583284_3584652_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3584720_3585938_+	D-alanyl-D-alanine carboxypeptidase DacB1	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3586033_3587542_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3587538_3588690_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3588880_3589726_-|protease	PDZ-interacting protease regulator Ppr1	protease	NA	NA	NA	NA
WP_003900026.1|3590200_3590641_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3590674_3591544_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3591564_3592575_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003905041.1|3592847_3593492_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3593558_3594788_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3595070_3596420_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3596431_3597571_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3597567_3598299_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_112612198.1|3598307_3607649_-	PPE family protein	NA	NA	NA	NA	NA
WP_009938644.1|3607697_3608714_-	hypothetical protein	NA	NA	NA	NA	NA
WP_174214483.1|3608871_3613479_-	PE family protein	NA	NA	NA	NA	NA
WP_003417619.1|3613902_3614160_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_152023599.1|3614415_3620295_-	PPE family protein	NA	NA	NA	NA	NA
WP_087902221.1|3621301_3622562_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_049961743.1|3625874_3626321_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_162629312.1|3626357_3627098_-|transposase	transposase	transposase	NA	NA	NA	NA
