The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP030750	Pseudomonas putida strain NX-1 chromosome, complete genome	5848357	1120118	1127879	5848357		Thermobifida_phage(16.67%)	10	NA	NA
WP_063543167.1|1120118_1120973_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	30.2	2.0e-07
WP_054894383.1|1120975_1121440_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA	NA
WP_054894382.1|1121452_1121761_-	ribosome-associated translation inhibitor RaiA	NA	A0A220NU75	Escherichia_phage	35.2	1.5e-05
WP_063543169.1|1121839_1123333_-	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_054894380.1|1123506_1124232_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.5	3.8e-23
WP_054894379.1|1124232_1124757_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_054894378.1|1124743_1125316_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_054894377.1|1125324_1125849_-	HAD family hydrolase	NA	A0A140XBD6	Dickeya_phage	47.4	9.0e-27
WP_054894376.1|1125849_1126824_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	32.9	5.2e-36
WP_054894375.1|1127069_1127879_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	5.9e-25
>prophage 2
NZ_CP030750	Pseudomonas putida strain NX-1 chromosome, complete genome	5848357	2061732	2127838	5848357	protease,coat	Bacillus_phage(18.18%)	60	NA	NA
WP_054892389.1|2061732_2063016_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	57.6	2.4e-137
WP_112897883.1|2063171_2065568_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	51.8	5.7e-217
WP_054892387.1|2065721_2065994_+	DNA-binding protein HU-beta	NA	A3E2K9	Sodalis_phage	62.9	2.2e-21
WP_112897884.1|2066178_2068050_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_112897885.1|2068159_2069200_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_054892384.1|2069357_2069636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112897886.1|2069650_2070418_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_112897887.1|2070511_2071309_+	thioesterase family protein	NA	NA	NA	NA	NA
WP_054892381.1|2071323_2071692_-	DUF962 domain-containing protein	NA	NA	NA	NA	NA
WP_063544120.1|2071767_2073246_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	34.9	1.2e-39
WP_112897888.1|2073333_2074131_-	hydrolase TatD	NA	NA	NA	NA	NA
WP_063544127.1|2074286_2075693_+	transglycosylase SLT domain-containing protein	NA	A0A0S2SXN2	Bacillus_phage	30.1	6.9e-05
WP_112897889.1|2075801_2076236_+	DoxX family protein	NA	NA	NA	NA	NA
WP_054892376.1|2076449_2076758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112897890.1|2076849_2077326_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_112897891.1|2077297_2078758_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_112897892.1|2078953_2080159_+	MFS transporter	NA	NA	NA	NA	NA
WP_112897893.1|2080121_2082629_-	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_063544135.1|2082628_2083312_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.9	9.4e-08
WP_112897894.1|2083322_2083928_+	arylesterase	NA	NA	NA	NA	NA
WP_054895440.1|2083986_2084268_+	hypothetical protein	NA	NA	NA	NA	NA
WP_054895441.1|2084378_2085356_+	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_003259780.1|2085506_2085758_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054895442.1|2086260_2086542_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_054895443.1|2086600_2087677_-	3-deoxy-7-phosphoheptulonate synthase	NA	A0A2I6UFP9	Klebsiella_phage	49.5	9.1e-82
WP_063544137.1|2088447_2089395_+	putative 2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_054895445.1|2089492_2089990_+	universal stress protein	NA	NA	NA	NA	NA
WP_054895446.1|2090117_2091092_+	HTH-type transcriptional regulator CysB	NA	NA	NA	NA	NA
WP_054895447.1|2091185_2091920_-	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA	NA
WP_112897896.1|2092037_2093381_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	33.2	4.6e-43
WP_054895449.1|2093490_2094471_-	alpha-L-glutamate ligase-like protein	NA	NA	NA	NA	NA
WP_063544143.1|2094470_2096006_-	inactive transglutaminase family protein	NA	NA	NA	NA	NA
WP_054895451.1|2096011_2096548_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
WP_112897897.1|2096824_2097541_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_054895453.1|2097537_2098428_+	methylisocitrate lyase	NA	NA	NA	NA	NA
WP_063544145.1|2098586_2099714_+	2-methylcitrate synthase	NA	NA	NA	NA	NA
WP_112899552.1|2099875_2102464_+	Fe/S-dependent 2-methylisocitrate dehydratase AcnD	NA	NA	NA	NA	NA
WP_054895455.1|2102609_2103803_+	2-methylaconitate cis-trans isomerase PrpF	NA	NA	NA	NA	NA
WP_112897900.1|2104098_2106708_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
WP_112897901.1|2107115_2107583_+	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
WP_112897902.1|2107651_2108404_+	hypothetical protein	NA	NA	NA	NA	NA
WP_028634508.1|2108415_2108772_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_112897903.1|2108825_2109905_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_054894716.1|2110072_2110381_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_054894717.1|2110380_2110695_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_054894718.1|2110695_2111367_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_054894719.1|2111363_2112683_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_112897904.1|2112922_2114080_+	HPP family protein	NA	NA	NA	NA	NA
WP_112897905.1|2114053_2114920_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_112897906.1|2115005_2116298_-	protein kinase	NA	NA	NA	NA	NA
WP_063544165.1|2116458_2118348_+	propionyl-CoA synthetase	NA	A0A2H4PQU7	Staphylococcus_phage	29.2	2.8e-54
WP_112899553.1|2118378_2119455_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_063544167.1|2119562_2119805_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112897907.1|2120269_2122657_-	hybrid sensor histidine kinase/response regulator	NA	Q8QNA2	Ectocarpus_siliculosus_virus	25.7	2.6e-12
WP_054894727.1|2122668_2123130_-	response regulator	NA	NA	NA	NA	NA
WP_112897908.1|2123153_2125397_-	GAF domain-containing protein	NA	B5LWN8	Feldmannia_species_virus	22.1	3.7e-29
WP_112897909.1|2125685_2126213_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_063544175.1|2126246_2126780_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_054894731.1|2126797_2127331_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_112897910.1|2127334_2127838_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
>prophage 3
NZ_CP030750	Pseudomonas putida strain NX-1 chromosome, complete genome	5848357	2226683	2236677	5848357	tRNA	uncultured_Caudovirales_phage(77.78%)	11	NA	NA
WP_112897943.1|2226683_2227964_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	54.1	7.7e-96
WP_112897944.1|2227964_2229356_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_112897945.1|2229475_2230435_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_112897946.1|2230533_2231532_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	79.3	1.2e-152
WP_054892321.1|2231540_2231876_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	76.6	1.8e-44
WP_054892320.1|2231872_2232169_-	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	65.7	3.2e-29
WP_063544273.1|2232168_2232528_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	62.5	8.0e-35
WP_112897947.1|2232529_2232922_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	81.4	5.9e-55
WP_112897948.1|2233008_2234388_-	uracil-xanthine permease	NA	H9YQ34	environmental_Halophage	50.7	8.2e-27
WP_054892316.1|2234570_2235242_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	90.6	3.4e-103
WP_112897949.1|2236347_2236677_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JFL3	uncultured_Caudovirales_phage	44.6	1.0e-15
>prophage 4
NZ_CP030750	Pseudomonas putida strain NX-1 chromosome, complete genome	5848357	3612722	3671972	5848357	terminase,integrase,protease,capsid,coat,tail,holin	uncultured_Caudovirales_phage(53.19%)	77	3613258:3613317	3670688:3670775
WP_112898592.1|3612722_3613196_+|integrase	integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	52.9	4.3e-36
3613258:3613317	attL	AAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATC	NA	NA	NA	NA
WP_112899588.1|3613521_3613728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898594.1|3614130_3614793_+	SOS response-associated peptidase	NA	A0A2H4J991	uncultured_Caudovirales_phage	72.3	3.4e-95
WP_112898595.1|3614786_3614993_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162714408.1|3615022_3615223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898597.1|3615224_3615731_-	DUF2514 domain-containing protein	NA	A0A2H4J3Q6	uncultured_Caudovirales_phage	71.8	8.4e-38
WP_065863448.1|3615727_3616159_-	lysozyme	NA	A0A0S2SYD0	Pseudomonas_phage	79.4	3.1e-57
WP_112898598.1|3616219_3616558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898599.1|3616554_3617568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898600.1|3622269_3622890_-|tail	tail assembly protein	tail	A0A2H4J1H0	uncultured_Caudovirales_phage	63.9	3.1e-66
WP_112898602.1|3623292_3623484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898606.1|3625680_3625950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898607.1|3625975_3626731_-	C40 family peptidase	NA	A0A2H4J1J7	uncultured_Caudovirales_phage	79.7	3.6e-125
WP_112898608.1|3626733_3627483_-|tail	phage minor tail protein L	tail	A0A0S2SY57	Pseudomonas_phage	79.1	1.8e-121
WP_112898609.1|3627479_3627818_-|tail	phage tail protein	tail	A0A2H4JI07	uncultured_Caudovirales_phage	75.0	8.1e-45
WP_112898610.1|3627817_3631273_-|tail	phage tail tape measure protein	tail	A0A2H4J9A1	uncultured_Caudovirales_phage	48.6	1.2e-212
WP_112898611.1|3631276_3631528_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	80.2	3.8e-31
WP_112898612.1|3631590_3631974_-	hypothetical protein	NA	A0A2H4IYQ5	uncultured_Caudovirales_phage	55.9	2.0e-36
WP_112898613.1|3631983_3632643_-|tail	phage tail protein	tail	A0A2H4J591	uncultured_Caudovirales_phage	70.5	7.0e-85
WP_112898614.1|3632740_3633364_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898615.1|3633559_3633997_-	hypothetical protein	NA	A0A2H4J5P1	uncultured_Caudovirales_phage	93.4	6.3e-66
WP_112898616.1|3633993_3634668_-	hypothetical protein	NA	A0A2H4J0Q3	uncultured_Caudovirales_phage	90.2	3.8e-110
WP_112898617.1|3634670_3635063_-	hypothetical protein	NA	A0A2H4IZB5	uncultured_Caudovirales_phage	91.5	4.9e-62
WP_112898618.1|3635103_3635328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898619.1|3635334_3635712_-	hypothetical protein	NA	A0A2H4J0N2	uncultured_Caudovirales_phage	89.5	4.8e-54
WP_112898620.1|3635715_3636156_-	hypothetical protein	NA	A0A2H4J0G3	uncultured_Caudovirales_phage	91.1	6.5e-71
WP_112898621.1|3636203_3637181_-|coat	phage coat protein	coat	A0A2H4JIE6	uncultured_Caudovirales_phage	95.1	3.0e-177
WP_112898622.1|3637184_3637958_-	hypothetical protein	NA	A0A2H4J0I7	uncultured_Caudovirales_phage	95.3	2.6e-131
WP_112898623.1|3638055_3638670_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898624.1|3638748_3639840_-|capsid	minor capsid protein	capsid	A0A2H4J3G9	uncultured_Caudovirales_phage	94.5	8.6e-189
WP_112898625.1|3639766_3641218_-	DUF4055 domain-containing protein	NA	A0A2H4J0H4	uncultured_Caudovirales_phage	94.8	6.6e-269
WP_112898626.1|3641217_3642546_-|terminase	terminase	terminase	A0A1B0VP58	Pseudomonas_phage	91.8	2.0e-240
WP_112898627.1|3642520_3642997_-	DUF2280 domain-containing protein	NA	A0A1B0VMH2	Pseudomonas_phage	81.0	6.2e-67
WP_112898628.1|3643028_3643640_-	hypothetical protein	NA	A0A1B0VRJ1	Pseudomonas_phage	71.4	1.4e-84
WP_112898629.1|3643648_3643834_-	hypothetical protein	NA	A0A0H5ARJ1	Pseudomonas_phage	56.9	1.1e-11
WP_112898630.1|3643843_3644035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898632.1|3644338_3644671_-|holin	phage holin, lambda family	holin	A0A2H4J1U5	uncultured_Caudovirales_phage	88.2	5.1e-52
WP_112898633.1|3644702_3645212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162714409.1|3645379_3645802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898635.1|3646219_3646909_-	hypothetical protein	NA	H2BDI9	Pseudomonas_virus	47.1	5.0e-49
WP_112898636.1|3647024_3647384_-	endodeoxyribonuclease RusA	NA	F8TUQ5	EBPR_podovirus	33.3	2.1e-06
WP_112898637.1|3647380_3647683_-	DUF1364 family protein	NA	A0A2K8HR56	Pseudomonas_phage	52.9	2.3e-22
WP_112898638.1|3647990_3648389_-	NinB family protein	NA	A0A059VG13	Pseudomonas_phage	83.3	8.6e-62
WP_112898639.1|3648381_3648603_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898640.1|3648772_3649579_-	ATP-binding protein	NA	A0A2H4J3E5	uncultured_Caudovirales_phage	91.8	1.3e-136
WP_112898641.1|3649568_3650426_-	replication protein	NA	A0A0S2SYI8	Pseudomonas_phage	36.6	1.8e-32
WP_023628611.1|3650787_3650976_-	hypothetical protein	NA	B5WZX7	Pseudomonas_phage	61.3	5.0e-12
WP_112898643.1|3651006_3651213_-	hypothetical protein	NA	A0A0U1UNM4	Pseudomonas_phage	68.3	1.1e-15
WP_112898644.1|3651319_3652117_+	helix-turn-helix domain-containing protein	NA	A0A0U1SXS9	Pseudomonas_phage	54.2	1.5e-73
WP_112898645.1|3652196_3652940_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898646.1|3652936_3653773_+	DUF3037 domain-containing protein	NA	NA	NA	NA	NA
WP_112898647.1|3653864_3654431_+	hypothetical protein	NA	A0A0S2SY85	Pseudomonas_phage	28.3	8.9e-12
WP_112898648.1|3655092_3655767_+	polysaccharide lyase family 7 protein	NA	NA	NA	NA	NA
WP_112899591.1|3656159_3656357_+	hypothetical protein	NA	A0A2H4JA69	uncultured_Caudovirales_phage	58.6	5.6e-14
WP_112898649.1|3656353_3656614_+	hypothetical protein	NA	A0A0S2SY95	Pseudomonas_phage	57.0	3.5e-24
WP_112898650.1|3656634_3657054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898651.1|3657050_3657254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898652.1|3657584_3658709_+	hypothetical protein	NA	A0A1B0VN89	Pseudomonas_phage	64.8	3.8e-54
WP_112899592.1|3658918_3659533_+	single-stranded DNA-binding protein	NA	A0A1B0VMB2	Pseudomonas_phage	83.3	3.4e-57
WP_112898653.1|3659529_3660297_+	recombinase	NA	A0A0M3LPU0	Mannheimia_phage	29.1	1.7e-13
WP_112898654.1|3660293_3660833_+	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	71.1	2.0e-45
WP_112898655.1|3661075_3661597_+	hypothetical protein	NA	A0A2H4JAQ1	uncultured_Caudovirales_phage	58.7	1.2e-10
WP_112898656.1|3661574_3662024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898657.1|3662124_3662961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898658.1|3663049_3664867_+	DNA methyltransferase	NA	Q5QF27	Pseudomonas_virus	66.5	5.9e-259
WP_112898660.1|3665266_3665617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898661.1|3665712_3666159_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898662.1|3666155_3666389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081255280.1|3666510_3666810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898663.1|3667423_3667747_+	hypothetical protein	NA	A0A2H4J0N7	uncultured_Caudovirales_phage	83.2	7.4e-48
WP_112898664.1|3667743_3668139_+	DUF2591 family protein	NA	NA	NA	NA	NA
WP_162714410.1|3668135_3668291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898665.1|3668337_3668763_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898666.1|3668813_3669290_+	hypothetical protein	NA	A0A1B0VM52	Pseudomonas_phage	56.7	8.4e-40
WP_112898667.1|3669329_3669575_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_112898668.1|3669576_3670626_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	57.5	1.0e-101
WP_112898669.1|3670946_3671972_-|protease	protease SohB	protease	NA	NA	NA	NA
3670688:3670775	attR	AAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCG	NA	NA	NA	NA
>prophage 5
NZ_CP030750	Pseudomonas putida strain NX-1 chromosome, complete genome	5848357	3900645	3939250	5848357	terminase,tRNA,integrase,protease,capsid,lysis,head,plate,tail,holin,portal	uncultured_Caudovirales_phage(72.97%)	47	3915453:3915470	3940853:3940870
WP_112898769.1|3900645_3901923_-	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	49.2	1.6e-109
WP_112899600.1|3901912_3902341_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1L5C2A3	Pseudoalteromonas_phage	39.8	1.9e-11
WP_112898770.1|3902442_3903132_+	hypothetical protein	NA	A0A2H4J991	uncultured_Caudovirales_phage	48.7	4.2e-56
WP_112898771.1|3903556_3904351_-	DNA adenine methylase	NA	C7BGE1	Burkholderia_phage	66.8	4.2e-100
WP_112898772.1|3904504_3905023_-|lysis	lysis protein	lysis	B5TK84	Pseudomonas_phage	52.1	1.4e-32
WP_054925489.1|3905019_3905658_-	glycoside hydrolase family 19 protein	NA	A0A125RNP1	Pseudomonas_phage	52.6	1.9e-50
WP_112898773.1|3905680_3906733_-	late control protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	71.8	2.5e-140
WP_112898774.1|3906791_3906998_-|tail	phage tail protein	tail	A0A2H4J9Z9	uncultured_Caudovirales_phage	67.2	1.9e-20
WP_112898775.1|3906972_3907815_-|tail	phage tail protein	tail	A0A2H4J875	uncultured_Caudovirales_phage	48.9	1.4e-66
WP_112898776.1|3907824_3910425_-|tail	phage tail tape measure protein	tail	A0A2H4JG00	uncultured_Caudovirales_phage	30.1	4.6e-47
WP_054925477.1|3910556_3910853_-|tail	phage tail assembly protein	tail	A0A2H4J873	uncultured_Caudovirales_phage	54.7	2.7e-20
WP_112898777.1|3910878_3911388_-|tail	phage major tail tube protein	tail	A0A2H4JBU0	uncultured_Caudovirales_phage	65.9	5.6e-58
WP_112898778.1|3911400_3912567_-|tail	phage tail sheath family protein	tail	A0A2H4J869	uncultured_Caudovirales_phage	82.2	1.6e-180
WP_112898779.1|3912647_3913079_-|tail	phage tail protein	tail	B5TK82	Pseudomonas_phage	41.2	1.4e-20
WP_112898780.1|3914973_3915579_-|tail	phage tail protein I	tail	A0A2H4JDH5	uncultured_Caudovirales_phage	61.6	2.9e-69
3915453:3915470	attL	GGTACAGCAGGTGCGGCG	NA	NA	NA	NA
WP_112898781.1|3915575_3916463_-|plate	baseplate assembly protein	plate	A0A2H4JFK9	uncultured_Caudovirales_phage	67.1	2.8e-105
WP_112898782.1|3916459_3916786_-|plate	phage baseplate protein	plate	A0A2H4JA09	uncultured_Caudovirales_phage	63.0	5.2e-33
WP_112898783.1|3916790_3916991_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898784.1|3917031_3917592_-|plate	phage baseplate assembly protein V	plate	A0A2H4JG06	uncultured_Caudovirales_phage	70.2	1.7e-60
WP_112898785.1|3917588_3918119_-	hypothetical protein	NA	A0A2H4J881	uncultured_Caudovirales_phage	51.3	4.4e-37
WP_112898786.1|3918111_3918774_-	hypothetical protein	NA	A0A2H4JBV1	uncultured_Caudovirales_phage	66.2	1.4e-77
WP_112898787.1|3918770_3919085_-	hypothetical protein	NA	A0A2H4J879	uncultured_Caudovirales_phage	57.7	9.8e-29
WP_054925448.1|3919086_3920088_-|capsid	major capsid protein	capsid	A0A2H4J890	uncultured_Caudovirales_phage	71.8	5.9e-136
WP_112898788.1|3920150_3920498_-|head	head decoration protein	head	A0A2H4JF15	uncultured_Caudovirales_phage	66.1	4.0e-31
WP_112898789.1|3920500_3921658_-|protease	Clp protease ClpP	protease	A0A2H4JDI2	uncultured_Caudovirales_phage	67.1	6.9e-128
WP_112898790.1|3921654_3923148_-|portal	phage portal protein	portal	A0A2H4JFL5	uncultured_Caudovirales_phage	75.7	1.5e-212
WP_054925440.1|3923141_3923348_-	hypothetical protein	NA	A0A2H4JA19	uncultured_Caudovirales_phage	72.1	9.3e-20
WP_112898791.1|3923350_3925387_-|terminase	phage terminase large subunit family protein	terminase	A0A2H4J898	uncultured_Caudovirales_phage	77.0	1.3e-310
WP_112898792.1|3925391_3926006_-|terminase	terminase small subunit	terminase	A0A2H4JG15	uncultured_Caudovirales_phage	53.4	6.6e-45
WP_112898793.1|3926148_3926496_-|holin	holin	holin	B5TK61	Pseudomonas_phage	76.5	3.7e-45
WP_112898794.1|3926555_3926906_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898795.1|3927044_3927593_-	hypothetical protein	NA	A0A2H4J8A5	uncultured_Caudovirales_phage	50.0	4.8e-23
WP_162714414.1|3927589_3927922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898796.1|3927918_3930699_-	bifunctional DNA primase/polymerase	NA	A0A2H4JF22	uncultured_Caudovirales_phage	63.8	0.0e+00
WP_112898797.1|3930695_3930899_-	transcriptional regulator	NA	A0A2H4JDJ0	uncultured_Caudovirales_phage	60.3	1.2e-14
WP_112898798.1|3930891_3931380_-	hypothetical protein	NA	A0A2H4JFM0	uncultured_Caudovirales_phage	53.9	5.6e-31
WP_112898799.1|3931594_3931819_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898800.1|3931916_3932621_+	peptidase	NA	A0A0U4JEE2	Pseudomonas_phage	42.6	1.8e-38
WP_162714415.1|3932758_3932923_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898801.1|3932919_3933429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898802.1|3933425_3933671_+	transcriptional regulator	NA	A0A2H4J8B4	uncultured_Caudovirales_phage	60.3	3.3e-16
WP_112898803.1|3933756_3934254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898804.1|3934369_3934558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112898808.1|3934932_3935208_+	Pyocin activator protein PrtN	NA	A0A2K8HN48	Pseudomonas_phage	59.3	6.4e-24
WP_112899601.1|3935416_3936751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112898810.1|3937013_3938135_-|integrase	site-specific integrase	integrase	A0A2K8I325	Pseudomonas_phage	61.4	5.8e-132
WP_112898813.1|3938239_3939250_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
3940853:3940870	attR	CGCCGCACCTGCTGTACC	NA	NA	NA	NA
>prophage 6
NZ_CP030750	Pseudomonas putida strain NX-1 chromosome, complete genome	5848357	4420689	4516295	5848357	tRNA,protease,plate,tail,holin	uncultured_Caudovirales_phage(28.95%)	95	NA	NA
WP_054891002.1|4420689_4422465_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SIS0	Klosneuvirus	26.7	2.5e-12
WP_063545878.1|4422559_4422778_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_112898997.1|4422870_4423188_-	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023381917.1|4423367_4423841_-	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	36.4	2.4e-18
WP_054891005.1|4424122_4424716_+	cold shock domain-containing protein	NA	A0A1X9IGI9	Lactococcus_phage	48.3	2.3e-10
WP_054891006.1|4424734_4424941_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063545879.1|4424944_4425364_-	HIT domain-containing protein	NA	NA	NA	NA	NA
WP_112898998.1|4426108_4427401_+	OprD family porin	NA	NA	NA	NA	NA
WP_063545881.1|4427560_4429276_+|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_112898999.1|4429296_4430250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162714453.1|4430280_4431339_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_063545884.1|4432295_4434938_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA	NA
WP_054891013.1|4434937_4436230_+	virulence factor family protein	NA	NA	NA	NA	NA
WP_054891014.1|4436267_4438166_-	potassium transporter Kup	NA	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	34.3	1.2e-76
WP_054891015.1|4438434_4439766_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_112899001.1|4439875_4440334_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_112899002.1|4440445_4441156_+	RNA-binding protein	NA	NA	NA	NA	NA
WP_054891018.1|4441205_4441667_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	48.0	3.9e-34
WP_112899003.1|4441674_4442370_+|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
WP_054891020.1|4442436_4443216_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_054891021.1|4443337_4444264_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_054891022.1|4444267_4444633_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_054891023.1|4444705_4445356_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_065862255.1|4445612_4446323_-	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_063545888.1|4446545_4446968_+	quorum-sensing-regulated virulence factor family protein	NA	NA	NA	NA	NA
WP_112899004.1|4446969_4447173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112899005.1|4447529_4448648_+	LOG family protein	NA	NA	NA	NA	NA
WP_112899006.1|4448708_4449179_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_063545891.1|4449198_4450266_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	62.3	9.8e-113
WP_063545892.1|4450370_4450853_-	nicotinamide-nucleotide amidohydrolase family protein	NA	B5TK85	Pseudomonas_phage	78.0	4.8e-59
WP_063546862.1|4450912_4451410_-	lysozyme	NA	B5TK84	Pseudomonas_phage	59.3	5.0e-35
WP_063545893.1|4451406_4451955_-	glycoside hydrolase family 19 protein	NA	B5TK83	Pseudomonas_phage	70.2	2.1e-71
WP_063545894.1|4452025_4452382_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081255305.1|4452305_4452578_-	Com family DNA-binding transcriptional regulator	NA	B5TK59	Pseudomonas_phage	65.8	4.1e-07
WP_112899007.1|4452608_4453643_-	phage late control D family protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	69.9	3.7e-133
WP_063545897.1|4453683_4453890_-|tail	phage tail protein	tail	A0A2H4J9Z9	uncultured_Caudovirales_phage	70.1	3.2e-20
WP_112899008.1|4453864_4454710_-|tail	phage tail protein	tail	A0A2H4J875	uncultured_Caudovirales_phage	55.0	9.9e-84
WP_162714422.1|4454725_4456756_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054891038.1|4456880_4457183_-|tail	phage tail assembly protein	tail	A0A2H4J873	uncultured_Caudovirales_phage	58.1	1.1e-21
WP_054891039.1|4457194_4457704_-|tail	phage major tail tube protein	tail	A0A2H4JBU0	uncultured_Caudovirales_phage	72.5	3.6e-65
WP_112899010.1|4457717_4458884_-|tail	phage tail sheath family protein	tail	A0A2H4J869	uncultured_Caudovirales_phage	81.5	2.3e-179
WP_162714423.1|4459011_4459593_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112899011.1|4459608_4461339_-|tail	phage tail protein	tail	A0A077K818	Ralstonia_phage	49.0	3.0e-79
WP_112899012.1|4461331_4461940_-|tail	phage tail protein I	tail	A0A2H4JDH5	uncultured_Caudovirales_phage	62.9	1.6e-72
WP_112899013.1|4461941_4462823_-|plate	baseplate assembly protein	plate	A0A2H4JFK9	uncultured_Caudovirales_phage	68.6	6.7e-107
WP_063545905.1|4462819_4463146_-|plate	phage baseplate protein	plate	A0A2H4JA09	uncultured_Caudovirales_phage	64.2	3.1e-33
WP_112899014.1|4463233_4463794_-|plate	phage baseplate assembly protein V	plate	A0A2H4JG06	uncultured_Caudovirales_phage	66.5	3.5e-53
WP_112899015.1|4463790_4464288_-	hypothetical protein	NA	A0A2H4J881	uncultured_Caudovirales_phage	32.5	4.4e-15
WP_054891048.1|4464299_4464623_-|holin	pyocin R2, holin	holin	B5TK61	Pseudomonas_phage	86.4	5.0e-44
WP_054891094.1|4465164_4465899_-	helix-turn-helix transcriptional regulator	NA	B5TK58	Pseudomonas_phage	84.8	1.8e-118
WP_153773116.1|4465963_4466404_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112899016.1|4466551_4469122_+	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	23.0	2.0e-26
WP_054891051.1|4469258_4469582_+	ferredoxin family protein	NA	NA	NA	NA	NA
WP_054891052.1|4470085_4471093_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
WP_063545911.1|4471202_4472063_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV79	Clostridium_phage	35.3	5.5e-13
WP_162714454.1|4472251_4472890_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	51.2	3.0e-40
WP_054891055.1|4472931_4473681_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.4	3.1e-65
WP_112899017.1|4473668_4474727_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_054891057.1|4474723_4475197_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_112899018.1|4475268_4476123_-	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_009686067.1|4476131_4477244_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.3	1.1e-32
WP_112899019.1|4477350_4478247_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_112899020.1|4478271_4478979_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_054891061.1|4478975_4479257_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_054891062.1|4479413_4480703_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.6	1.9e-139
WP_054891063.1|4480856_4481702_-	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.0	6.5e-51
WP_054891064.1|4481704_4483333_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.3	6.2e-159
WP_112899021.1|4483602_4484898_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_054891066.1|4485003_4485951_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
WP_065862280.1|4486056_4489581_-	DNA polymerase III subunit alpha	NA	R4TMT6	Streptomyces_phage	36.1	6.8e-195
WP_063545917.1|4489671_4490295_-	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	40.2	3.7e-27
WP_054891069.1|4490296_4491424_-	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_054891070.1|4491425_4492202_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_054891071.1|4492198_4492639_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_063545918.1|4492752_4493808_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_054891073.1|4493809_4494313_-	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_112899022.1|4494357_4496706_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_112899023.1|4496782_4498135_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_054891076.1|4498181_4499372_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_112899024.1|4499368_4500184_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_054891078.1|4500183_4500939_-	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	39.6	2.6e-19
WP_054891079.1|4500954_4501512_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_023381972.1|4501508_4502252_-	UMP kinase	NA	NA	NA	NA	NA
WP_063545921.1|4502432_4503296_-	elongation factor Ts	NA	NA	NA	NA	NA
WP_054891081.1|4503482_4504220_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_054891082.1|4504564_4505347_+	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_054891083.1|4505369_4508069_+	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_112899025.1|4508090_4509287_+	succinyldiaminopimelate transaminase	NA	NA	NA	NA	NA
WP_112899026.1|4509590_4510328_+	peptidase M12	NA	NA	NA	NA	NA
WP_112899027.1|4510330_4511977_-	Na+/H+ antiporter	NA	NA	NA	NA	NA
WP_054891086.1|4512259_4512607_+	ArsC family reductase	NA	NA	NA	NA	NA
WP_112899028.1|4512643_4513678_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_054891088.1|4513799_4515005_+	cysteine desulfurase	NA	A0A2K9L2Y3	Tupanvirus	30.8	1.3e-57
WP_112899029.1|4515001_4515412_+	SufE family protein	NA	NA	NA	NA	NA
WP_162714424.1|4515485_4516295_-|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	A0A291ATS8	Pandoravirus	34.9	3.4e-17
>prophage 7
NZ_CP030750	Pseudomonas putida strain NX-1 chromosome, complete genome	5848357	5442704	5449769	5848357		uncultured_Caudovirales_phage(83.33%)	8	NA	NA
WP_112899371.1|5442704_5442947_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	80.9	2.1e-23
WP_112899372.1|5442867_5443233_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	84.9	1.3e-27
WP_112899373.1|5443552_5444206_-	hypothetical protein	NA	NA	NA	NA	NA
WP_112899374.1|5444392_5444863_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	67.9	1.1e-55
WP_112899375.1|5444890_5446174_-	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	72.2	3.1e-169
WP_112899376.1|5446192_5446540_-	metalloregulator ArsR/SmtB family transcription factor	NA	A0A2H4J145	uncultured_Caudovirales_phage	63.1	8.6e-34
WP_112899377.1|5446615_5448913_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_063541531.1|5449052_5449769_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.7	1.7e-31
