assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003351685.1_ASM335168v1	NZ_CP031255	Neisseria elongata strain M15910 chromosome, complete genome	1	430827-432446	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2	csa3,DEDDh,cas9,cas1,cas2,DinG,cas4,cas7,cas8c,cas5,cas3,WYL	Type II-C, Type II-B,Type II-B, or Type II-C?,Type II-A	ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC,ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC,ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	36,36,36	0	0	NA	NA	NA:NA:NA	23,24,24	24	TypeII-C,TypeII-B,TypeII-B,orTypeII-C?,TypeII-A	csa3,DEDDh,cas9,cas1,cas2,DinG,cas4,cas7,cas8c,cas5,cas3,WYL	NA,NA|176aa|down_2|NZ_CP031255.1_435356_435884_+	NA|516aa|up_9|NZ_CP031255.1_418895_420443_+	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|293aa|up_8|NZ_CP031255.1_420465_421344_+	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|466aa|up_7|NZ_CP031255.1_421379_422777_+	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|142aa|up_6|NZ_CP031255.1_422789_423215_+	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated	NA|132aa|up_5|NZ_CP031255.1_423600_423996_+	pfam03724, META, META domain	NA|307aa|up_4|NZ_CP031255.1_424119_425040_-	cd03676, Nudix_hydrolase_3, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|254aa|up_3|NZ_CP031255.1_425069_425831_-	pfam04445, SAM_MT, Putative SAM-dependent methyltransferase	cas9|1083aa|up_2|NZ_CP031255.1_426209_429458_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|305aa|up_1|NZ_CP031255.1_429529_430444_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|109aa|up_0|NZ_CP031255.1_430436_430763_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|248aa|down_0|NZ_CP031255.1_433051_433795_-	PRK10765, PRK10765, oxygen-insensitive NADPH nitroreductase	NA|395aa|down_1|NZ_CP031255.1_434080_435265_+	PRK09126, PRK09126, FAD-dependent hydroxylase	NA|176aa|down_2|NZ_CP031255.1_435356_435884_+	NA	NA|370aa|down_3|NZ_CP031255.1_435970_437080_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|496aa|down_4|NZ_CP031255.1_437347_438835_-	pfam07693, KAP_NTPase, KAP family P-loop domain	NA|336aa|down_5|NZ_CP031255.1_439186_440194_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|632aa|down_6|NZ_CP031255.1_440326_442222_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|294aa|down_7|NZ_CP031255.1_442385_443267_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|194aa|down_8|NZ_CP031255.1_443532_444114_+	pfam07209, DUF1415, Protein of unknown function (DUF1415)	NA|121aa|down_9|NZ_CP031255.1_444110_444473_+	pfam04304, DUF454, Protein of unknown function (DUF454)
GCF_003351685.1_ASM335168v1	NZ_CP031255	Neisseria elongata strain M15910 chromosome, complete genome	2	1706525-1708317	2,2,2	CRT,CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	csa3,DEDDh,cas9,cas1,cas2,DinG,cas4,cas7,cas8c,cas5,cas3,WYL	Type I-U, Type I-U?,Type I-C	GTTTCAACACACAGCCGCC,GTTTCAACACACAGCCGCCCGAAGGCGGCTGG,GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	19,32,32	0	0	NA	NA	NA:NA:NA	27,26,26	27	TypeI-U,TypeI-U?,TypeI-C	csa3,DEDDh,cas9,cas1,cas2,DinG,cas4,cas7,cas8c,cas5,cas3,WYL	NA|308aa|up_9|NZ_CP031255.1_1694689_1695613_-,NA|184aa|up_7|NZ_CP031255.1_1697359_1697911_-,NA	NA|308aa|up_9|NZ_CP031255.1_1694689_1695613_-	NA	NA|401aa|up_8|NZ_CP031255.1_1695605_1696808_-	pfam10106, DUF2345, Uncharacterized protein conserved in bacteria (DUF2345)	NA|184aa|up_7|NZ_CP031255.1_1697359_1697911_-	NA	NA|489aa|up_6|NZ_CP031255.1_1697934_1699401_-	COG3179, COG3179, Predicted chitinase [General function prediction only]	NA|835aa|up_5|NZ_CP031255.1_1699400_1701905_-	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein	NA|274aa|up_4|NZ_CP031255.1_1702865_1703687_-	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA|150aa|up_3|NZ_CP031255.1_1703833_1704283_-	PRK00117, recX, recombination regulator RecX; Reviewed	NA|239aa|up_2|NZ_CP031255.1_1704363_1705080_-	cd16417, HAD_PGPase, Escherichia coli Gph phosphoglycolate phosphatase and related proteins; belongs to the haloacid dehalogenase-like superfamily	NA|235aa|up_1|NZ_CP031255.1_1705163_1705868_-	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA|160aa|up_0|NZ_CP031255.1_1705887_1706367_-	PRK02260, PRK02260, S-ribosylhomocysteine lyase	cas2|98aa|down_0|NZ_CP031255.1_1708506_1708800_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|338aa|down_1|NZ_CP031255.1_1708874_1709888_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	NA|585aa|down_2|NZ_CP031255.1_1709917_1711672_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	cas4|216aa|down_3|NZ_CP031255.1_1711692_1712340_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|289aa|down_4|NZ_CP031255.1_1712355_1713222_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|594aa|down_5|NZ_CP031255.1_1713233_1715015_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|225aa|down_6|NZ_CP031255.1_1715011_1715686_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|486aa|down_7|NZ_CP031255.1_1715762_1717220_-	pfam18185, STALD, Sir2- and TIR-associating SLOG family	NA|166aa|down_8|NZ_CP031255.1_1717259_1717757_-	pfam13676, TIR_2, TIR domain	NA|206aa|down_9|NZ_CP031255.1_1717769_1718387_-	pfam08937, DUF1863, MTH538 TIR-like domain (DUF1863)
