The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP031239	Haemophilus influenzae strain M13034 chromosome, complete genome	1887933	681848	690395	1887933		Escherichia_phage(83.33%)	9	NA	NA
WP_061671259.1|681848_682349_-	ferredoxin-type protein NapF	NA	A0A077SLP0	Escherichia_phage	31.8	3.2e-13
WP_050948635.1|682348_682960_-	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	32.5	3.0e-21
WP_050948634.1|683071_683911_-	dimethyl sulfoxide reductase anchor subunit	NA	A0A077SK59	Escherichia_phage	31.1	8.5e-19
WP_038441398.1|683912_684530_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	57.8	5.8e-73
WP_061671258.1|684540_686964_-	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	50.6	9.1e-223
WP_050948632.1|687216_688326_+	transglutaminase family protein	NA	NA	NA	NA	NA
WP_050948631.1|688300_688663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050948630.1|688672_688951_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_050948629.1|689741_690395_-	ABC transporter ATP-binding protein	NA	M1HXU1	Acanthocystis_turfacea_Chlorella_virus	25.7	3.2e-05
>prophage 2
NZ_CP031239	Haemophilus influenzae strain M13034 chromosome, complete genome	1887933	723382	734374	1887933	head,capsid,tail	Haemophilus_phage(70.0%)	11	NA	NA
WP_050948608.1|723382_724717_-	phage morphogenesis protein	NA	F6MIL2	Haemophilus_phage	45.6	1.4e-108
WP_021034873.1|727054_727261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050948607.1|727275_727617_-	hypothetical protein	NA	A0A0M3LSI2	Mannheimia_phage	50.5	1.8e-20
WP_050948606.1|727616_727988_-	hypothetical protein	NA	A0A0M3LRV6	Mannheimia_phage	65.0	6.8e-37
WP_050948605.1|727997_729413_-|tail	phage tail protein	tail	B7SDP8	Haemophilus_phage	62.0	7.3e-156
WP_005688541.1|729405_729588_-	DUF2635 domain-containing protein	NA	A0A0M3LQM9	Mannheimia_phage	64.8	8.2e-12
WP_050948604.1|729932_730238_-	hypothetical protein	NA	B7SDP3	Haemophilus_phage	50.0	1.6e-20
WP_050948603.1|730277_731198_-|head	head protein	head	B7SDP1	Haemophilus_phage	71.9	7.9e-127
WP_050948602.1|731197_732247_-	hypothetical protein	NA	B7SDN9	Haemophilus_phage	61.0	2.5e-108
WP_050948601.1|732500_732986_-	phage virion morphogenesis protein	NA	B7SDN8	Haemophilus_phage	50.9	4.6e-33
WP_050948600.1|733096_734374_-|capsid	minor capsid protein	capsid	B7SDN5	Haemophilus_phage	52.9	1.3e-122
>prophage 3
NZ_CP031239	Haemophilus influenzae strain M13034 chromosome, complete genome	1887933	1151379	1157859	1887933		Sodalis_phage(16.67%)	8	NA	NA
WP_042602652.1|1151379_1151670_+	integration host factor subunit alpha	NA	Q2A099	Sodalis_phage	38.2	1.9e-10
WP_050949225.1|1151722_1152208_+	endopeptidase	NA	A0A2H5BM69	Streptomyces_phage	40.2	7.8e-17
WP_005662473.1|1152272_1153226_+	WYL domain-containing transcriptional regulator	NA	NA	NA	NA	NA
WP_050949224.1|1154166_1154877_+	NAD-dependent deacylase	NA	R9TG77	Vibrio_phage	37.6	8.5e-28
WP_050847951.1|1154925_1155930_-	cytochrome c	NA	Q9JMN3	Wolbachia_phage	37.8	1.2e-19
WP_050949223.1|1156150_1156351_+	cell division protein FtsK	NA	NA	NA	NA	NA
WP_050949222.1|1156347_1157193_+	NAD-dependent deacetylase	NA	A0A1C3S788	Escherichia_phage	24.1	7.0e-05
WP_005662456.1|1157577_1157859_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	42.7	2.5e-07
>prophage 4
NZ_CP031239	Haemophilus influenzae strain M13034 chromosome, complete genome	1887933	1387593	1444977	1887933	portal,capsid,terminase,tRNA,protease,head,tail	Mannheimia_phage(37.5%)	49	NA	NA
WP_050949089.1|1387593_1388403_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_050848629.1|1388637_1389639_+	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	43.9	1.8e-71
WP_050949088.1|1390328_1391777_-|protease	metalloprotease TldD	protease	NA	NA	NA	NA
WP_050949087.1|1391878_1392730_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	2.5e-50
WP_050949086.1|1392801_1394529_+	penicillin-binding protein activator	NA	NA	NA	NA	NA
WP_050949085.1|1394528_1394888_+	YraN family protein	NA	NA	NA	NA	NA
WP_032823582.1|1394900_1395485_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_032823584.1|1395541_1396123_+	divisome-associated lipoprotein YraP	NA	NA	NA	NA	NA
WP_050949084.1|1396377_1398648_+	ribonucleoside-diphosphate reductase subunit alpha	NA	I3UMG3	Colwellia_phage	67.1	2.1e-301
WP_050848624.1|1398657_1398966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005650087.1|1399114_1400245_+	ribonucleotide-diphosphate reductase subunit beta	NA	G9IAA3	Pseudomonas_phage	78.6	1.6e-169
WP_050949083.1|1400359_1401589_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_005667196.1|1401695_1404503_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_114893743.1|1404700_1405786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005667189.1|1406197_1406836_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_005667187.1|1406845_1407601_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_005632553.1|1407652_1408213_-	YcbK family protein	NA	NA	NA	NA	NA
WP_005667185.1|1408228_1409698_-	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_005667183.1|1409771_1411853_-	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	32.3	5.5e-83
WP_005667181.1|1411880_1412519_-	RNA chaperone ProQ	NA	NA	NA	NA	NA
WP_005667179.1|1412702_1413953_+	paraquat-inducible protein A	NA	NA	NA	NA	NA
WP_005667177.1|1413936_1416582_+	PqiB family protein	NA	NA	NA	NA	NA
WP_050949082.1|1416636_1417089_-	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA	NA
WP_050949081.1|1417089_1417335_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA	NA
WP_050949080.1|1417336_1417819_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_050949079.1|1417910_1418924_-	GTP 3',8-cyclase MoaA	NA	D5GVS6	Campylobacter_virus	31.5	4.5e-06
WP_050949078.1|1419368_1420040_+	iron-sulfur cluster repair protein YtfE	NA	NA	NA	NA	NA
WP_050949077.1|1420653_1421589_+	KpsF/GutQ family sugar isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	35.5	3.6e-42
WP_050949076.1|1421598_1422141_+	HAD family hydrolase	NA	A0A140XBD6	Dickeya_phage	42.6	9.0e-22
WP_050949075.1|1422239_1424396_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_050949074.1|1424463_1425129_-	DUF2057 domain-containing protein	NA	NA	NA	NA	NA
WP_050949073.1|1425328_1426390_+|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	31.7	7.4e-20
WP_005631902.1|1426737_1427316_+	electron transport complex subunit RsxA	NA	NA	NA	NA	NA
WP_050949072.1|1427403_1427985_+	electron transport complex subunit RsxB	NA	NA	NA	NA	NA
WP_050949071.1|1427985_1430445_+	electron transport complex subunit RsxC	NA	NA	NA	NA	NA
WP_050949070.1|1430449_1431526_+	electron transport complex subunit RsxD	NA	NA	NA	NA	NA
WP_050949069.1|1431525_1432194_+	electron transport complex subunit RsxG	NA	NA	NA	NA	NA
WP_050949068.1|1432195_1432903_+	electron transport complex subunit E	NA	NA	NA	NA	NA
WP_005688005.1|1433082_1433718_+	endonuclease III	NA	NA	NA	NA	NA
WP_061671238.1|1433775_1435149_+	sodium-dependent transporter	NA	NA	NA	NA	NA
WP_050949427.1|1437313_1437736_-	phage virion morphogenesis protein	NA	A0A2H4J927	uncultured_Caudovirales_phage	50.9	2.1e-18
WP_050949428.1|1438312_1438663_-	chemotaxis protein	NA	NA	NA	NA	NA
WP_050949429.1|1438647_1439166_-	lysozyme	NA	A0A0M3LPQ1	Mannheimia_phage	47.7	1.5e-37
WP_005689816.1|1439158_1439380_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005653052.1|1439381_1439591_-|tail	tail protein	tail	A0A0M3LPY0	Mannheimia_phage	45.3	4.7e-11
WP_050949430.1|1439590_1440097_-|head	head completion/stabilization protein	head	A0A0M3LNL8	Mannheimia_phage	51.0	8.1e-33
WP_050949431.1|1440389_1441040_-|terminase	terminase	terminase	Q19US0	Mannheimia_phage	45.5	3.5e-44
WP_050949432.1|1441051_1442101_-|capsid	phage major capsid protein, P2 family	capsid	Q19UT3	Mannheimia_phage	50.7	1.4e-87
WP_050949433.1|1443966_1444977_+|portal	phage portal protein	portal	Q19UT6	Mannheimia_phage	60.5	2.8e-117
