The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040533	Klebsiella pneumoniae strain CR-HvKP1 chromosome, complete genome	5390059	422265	455371	5390059	terminase,portal,tail,head,tRNA,integrase,capsid,protease	uncultured_Caudovirales_phage(73.33%)	35	439721:439738	455716:455733
WP_002919147.1|422265_423213_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	37.2	2.2e-07
WP_002919144.1|423227_423737_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.3	2.6e-18
WP_002919139.1|423865_424990_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_002919137.1|424961_425435_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_004145330.1|425460_426003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002919132.1|426007_426580_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA	NA
WP_002919126.1|426583_427402_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_002919125.1|427398_427656_+	DUF1488 domain-containing protein	NA	NA	NA	NA	NA
WP_002919123.1|427631_428186_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_002919103.1|433829_434051_-	membrane protein	NA	NA	NA	NA	NA
WP_002919102.1|434344_437455_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_002919101.1|437467_438607_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_004150972.1|438985_439636_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA	NA
439721:439738	attL	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
WP_004150971.1|439911_441138_+|integrase	site-specific integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	62.2	1.8e-150
WP_004150970.1|441230_442172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001547839.1|442353_442638_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_004150969.1|442648_443428_+	hypothetical protein	NA	Q8HA02	Enterobacteria_phage	51.5	6.2e-40
WP_024194847.1|443551_443746_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106918304.1|443879_444149_+	host cell division inhibitor Icd-like protein	NA	A0A2H4JGW3	uncultured_Caudovirales_phage	94.4	2.4e-44
WP_001549752.1|444141_444330_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150967.1|444322_444637_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150966.1|444633_445002_+	hypothetical protein	NA	A0A2H4JCX7	uncultured_Caudovirales_phage	81.1	3.7e-51
WP_001549749.1|444998_445364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150965.1|445363_447499_+	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	62.4	3.4e-205
WP_004150964.1|447841_448177_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150963.1|448225_448738_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001549743.1|449001_450168_+|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	95.9	9.8e-207
WP_001547826.1|450219_450780_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	95.7	1.2e-98
WP_004150962.1|450781_452023_+|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	96.5	1.0e-230
WP_004150961.1|452019_452355_+|head	phage head closure protein	head	A0A2H4JHK5	uncultured_Caudovirales_phage	57.8	3.7e-26
WP_001547824.1|452351_452651_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JD08	uncultured_Caudovirales_phage	80.8	3.4e-39
WP_004150959.1|452650_453094_+	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	91.8	2.8e-77
WP_004198610.1|453220_453412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000113647.1|453369_453726_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	99.2	5.5e-60
WP_004150955.1|453709_455371_+|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	98.0	0.0e+00
455716:455733	attR	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
>prophage 2
NZ_CP040533	Klebsiella pneumoniae strain CR-HvKP1 chromosome, complete genome	5390059	1205324	1254468	5390059	plate,terminase,portal,coat,tail,head,transposase,tRNA,lysis,integrase,capsid	Salmonella_phage(80.0%)	63	1196915:1196931	1231941:1231957
1196915:1196931	attL	CCAGCTGCTGGCGCAGG	NA	NA	NA	NA
WP_000019473.1|1205324_1206305_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
WP_062955148.1|1206350_1207349_-|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	94.5	2.2e-183
WP_004151019.1|1207351_1207981_-	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	54.5	1.4e-61
WP_001397669.1|1208103_1208346_+	hypothetical protein	NA	A0A1S6KZZ6	Salmonella_phage	98.8	4.0e-38
WP_004151018.1|1208378_1208888_+	phage regulatory CII family protein	NA	A0A1S6L008	Salmonella_phage	85.8	1.1e-77
WP_004151017.1|1208895_1209096_+	DUF2724 domain-containing protein	NA	A0A1S6L005	Salmonella_phage	68.8	4.5e-19
WP_004144796.1|1209059_1209398_+	DUF5347 domain-containing protein	NA	A0A218M4I7	Erwinia_phage	58.0	6.2e-29
WP_004151016.1|1209465_1209699_+	DUF2732 family protein	NA	A0A1S6L021	Salmonella_phage	90.9	6.0e-31
WP_004151014.1|1209698_1209926_+	TraR/DksA family transcriptional regulator	NA	A0A1S6L007	Salmonella_phage	92.0	5.1e-35
WP_004151013.1|1209922_1210774_+	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	75.4	2.2e-115
WP_004151012.1|1210770_1213155_+	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	87.9	0.0e+00
WP_009483812.1|1213384_1213636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152765.1|1213635_1215120_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_004151011.1|1215227_1215416_+	hypothetical protein	NA	A0A1S6L006	Salmonella_phage	90.3	2.2e-23
WP_004151010.1|1215427_1215661_+	DinI family protein	NA	A0A0M4S6H1	Salmonella_phage	96.1	2.0e-34
WP_004151009.1|1215756_1216440_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004151008.1|1216426_1217506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004151007.1|1217505_1218507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024940854.1|1219028_1219298_+	hypothetical protein	NA	D2IZW1	Enterococcus_phage	41.3	1.4e-15
WP_004151006.1|1219354_1220398_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	85.6	3.1e-172
WP_019405037.1|1220397_1222161_-|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	91.8	0.0e+00
WP_004151004.1|1222301_1223135_+|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	77.6	4.4e-100
WP_004151003.1|1223151_1224204_+|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	91.0	6.8e-175
WP_004134644.1|1224207_1224861_+|terminase	terminase endonuclease subunit	terminase	A0A1S6KZX1	Salmonella_phage	80.0	1.9e-90
WP_004151002.1|1224956_1225421_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	85.7	1.5e-73
WP_004151001.1|1225420_1225624_+|tail	tail protein X	tail	E5G6M9	Salmonella_phage	89.6	9.8e-30
WP_004134639.1|1225627_1225843_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	88.7	6.1e-30
WP_004151000.1|1225823_1226333_+	lysozyme	NA	E5G6N1	Salmonella_phage	85.2	1.6e-81
WP_004150999.1|1226337_1226721_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	45.4	1.9e-18
WP_004150998.1|1226717_1227146_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	82.5	7.1e-54
WP_085955118.1|1227075_1227279_+	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	77.6	3.0e-23
WP_004150997.1|1227241_1227664_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	83.2	8.2e-63
WP_004150996.1|1227656_1228103_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	72.3	2.5e-54
WP_004150995.1|1228125_1228992_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150994.1|1229086_1229659_+|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	70.8	1.4e-76
WP_004150993.1|1229655_1230018_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	85.6	8.4e-48
WP_004150992.1|1230004_1230913_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	68.9	1.9e-109
WP_004152935.1|1230905_1231577_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	58.9	3.2e-61
WP_004150990.1|1231578_1233528_+|coat	spore coat protein CotH	coat	Q6QI97	Burkholderia_phage	38.9	1.0e-06
1231941:1231957	attR	CCTGCGCCAGCAGCTGG	NA	NA	NA	NA
WP_004200602.1|1233537_1234656_+	hypothetical protein	NA	A0A248XD67	Klebsiella_phage	38.0	4.4e-55
WP_004150988.1|1234707_1235781_+|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	53.6	6.6e-40
WP_004150987.1|1235929_1237102_+|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	91.5	3.4e-207
WP_004150986.1|1237111_1237627_+|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	84.2	1.4e-80
WP_004150985.1|1237679_1237979_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	78.0	8.2e-33
WP_002896220.1|1237993_1238113_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
WP_004150984.1|1238105_1240736_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	41.9	8.9e-115
WP_004150983.1|1240732_1241218_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.1	5.2e-61
WP_004150982.1|1241214_1242309_+	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	83.6	2.4e-170
WP_004150981.1|1242375_1242594_+	positive regulator of late gene transcription	NA	Q53ZE7	Salmonella_virus	72.2	1.9e-26
WP_004150980.1|1242621_1242999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002914164.1|1243602_1244085_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	2.3e-29
WP_004188817.1|1244195_1244672_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_002914161.1|1244661_1244952_+	RnfH family protein	NA	NA	NA	NA	NA
WP_002914160.1|1245018_1245360_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_002914159.1|1245507_1247169_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_002914158.1|1247255_1248134_-	NAD(+) kinase	NA	NA	NA	NA	NA
WP_002914155.1|1248258_1248849_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_004149392.1|1248968_1250255_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_002914153.1|1250274_1251066_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_002914152.1|1251229_1252594_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_002914149.1|1252853_1253102_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_004150977.1|1253120_1253669_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_002914147.1|1253700_1254468_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
>prophage 3
NZ_CP040533	Klebsiella pneumoniae strain CR-HvKP1 chromosome, complete genome	5390059	1359184	1398058	5390059	integrase,tail,terminase	Salmonella_phage(38.64%)	51	1352519:1352533	1382624:1382638
1352519:1352533	attL	TGAGCAGGTTCGCGA	NA	NA	NA	NA
WP_004151980.1|1359184_1360651_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	1.2e-87
WP_004151979.1|1360718_1362296_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
WP_062955102.1|1362487_1363738_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1X9TCT6	Enterobacter_phage	84.4	5.8e-205
WP_063002073.1|1363680_1363923_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004197356.1|1363919_1364513_-	MT-A70 family protein	NA	T1SA14	Salmonella_phage	91.9	6.3e-109
WP_062955103.1|1364509_1365172_-	hypothetical protein	NA	A0A059VF56	Pseudomonas_phage	46.6	1.2e-47
WP_048264082.1|1365168_1365327_-	DUF1317 family protein	NA	T1SAR0	Salmonella_phage	78.8	1.1e-17
WP_009485475.1|1365319_1365613_-	PerC family transcriptional regulator	NA	T1S9J5	Salmonella_phage	71.1	4.0e-32
WP_062955104.1|1365722_1365971_-	AlpA family phage regulatory protein	NA	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	76.8	4.9e-31
WP_062955105.1|1366019_1366901_-	recombinase RecT	NA	T1SBJ5	Salmonella_phage	84.3	8.9e-136
WP_062955106.1|1366897_1367719_-	exodeoxyribonuclease VIII	NA	A0A193GYK2	Enterobacter_phage	80.2	1.8e-130
WP_004164029.1|1367715_1368015_-	hypothetical protein	NA	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	54.5	2.1e-20
WP_004144290.1|1368381_1368963_-	helix-turn-helix transcriptional regulator	NA	Q858D7	Salmonella_phage	64.3	7.1e-65
WP_004152538.1|1369117_1369351_+	hypothetical protein	NA	T1SAR5	Salmonella_phage	66.2	9.2e-24
WP_004152537.1|1369497_1369707_+	hypothetical protein	NA	A0A193GYW4	Enterobacter_phage	78.3	1.8e-26
WP_004207253.1|1369706_1370474_+	hypothetical protein	NA	A0A193GZ86	Enterobacter_phage	91.4	8.9e-140
WP_032418532.1|1370470_1371256_+	replication protein	NA	A0A193GYX1	Enterobacter_phage	87.7	3.7e-133
WP_048328152.1|1371375_1371723_+	DUF1064 domain-containing protein	NA	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	82.6	6.5e-50
WP_062955107.1|1371915_1372326_+	hypothetical protein	NA	A0A2P1MXC5	Escherichia_phage	45.1	4.3e-16
WP_032441402.1|1372309_1372501_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032441401.1|1372497_1373142_+	hypothetical protein	NA	Q1MVG0	Enterobacteria_phage	79.3	8.0e-110
WP_072200041.1|1373435_1373903_+	hypothetical protein	NA	A0A2R2Z312	Escherichia_phage	51.7	1.3e-37
WP_029602865.1|1373902_1374196_+	hypothetical protein	NA	Q6UAT9	Klebsiella_phage	86.6	2.7e-44
WP_050491799.1|1374192_1374813_+	hypothetical protein	NA	Q1MVF7	Enterobacteria_phage	40.7	1.0e-29
WP_032441458.1|1374812_1375016_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023339258.1|1375008_1375347_+	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	80.0	1.8e-44
WP_004152765.1|1375443_1376928_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_009483812.1|1376927_1377179_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032418540.1|1377331_1377589_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032441400.1|1377666_1378251_+|terminase	terminase small subunit	terminase	T1SBI8	Salmonella_phage	88.6	2.2e-90
WP_062955142.1|1378247_1379723_+	hypothetical protein	NA	Q858H3	Salmonella_phage	93.1	6.4e-280
WP_004200550.1|1379766_1380138_-	hypothetical protein	NA	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	91.9	3.7e-59
WP_072354015.1|1380187_1380430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004141368.1|1380891_1381098_+	hypothetical protein	NA	T1SA67	Salmonella_phage	88.2	4.8e-08
WP_032441398.1|1381112_1382795_+|tail	tail protein	tail	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	84.4	1.5e-264
1382624:1382638	attR	TGAGCAGGTTCGCGA	NA	NA	NA	NA
WP_004152446.1|1382791_1383088_+	hypothetical protein	NA	T1SBI9	Salmonella_phage	70.4	1.2e-33
WP_032441397.1|1383090_1383771_+	peptidase	NA	G9L6C4	Escherichia_phage	84.0	6.1e-76
WP_004200546.1|1383785_1384772_+	hypothetical protein	NA	A0A193GZ49	Enterobacter_phage	94.2	2.5e-179
WP_020953461.1|1384825_1385263_+	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	91.7	1.3e-66
WP_062955141.1|1385273_1385615_+	hypothetical protein	NA	G9L6C7	Escherichia_phage	70.8	2.4e-36
WP_004152441.1|1385665_1385989_+	hypothetical protein	NA	G9L6C8	Escherichia_phage	85.0	5.3e-46
WP_062955139.1|1385988_1386594_+	hypothetical protein	NA	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	77.0	4.0e-87
WP_062955138.1|1386593_1389071_+	hypothetical protein	NA	Q858G3	Salmonella_phage	84.4	0.0e+00
WP_004152438.1|1389070_1389535_+	hypothetical protein	NA	Q858G2	Salmonella_phage	81.2	1.5e-70
WP_032447858.1|1389534_1390074_+	hypothetical protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	80.0	8.0e-71
WP_062955137.1|1390084_1392619_+	hypothetical protein	NA	Q858G0	Salmonella_phage	84.1	0.0e+00
WP_062955136.1|1392618_1394529_+	hypothetical protein	NA	Q858F9	Salmonella_phage	82.7	5.4e-287
WP_062955135.1|1394528_1397285_+	hypothetical protein	NA	Q858F8	Salmonella_phage	95.4	0.0e+00
WP_062955134.1|1397281_1397476_+	hypothetical protein	NA	Q858F7	Salmonella_phage	67.2	6.5e-15
WP_071787028.1|1397510_1397663_-	transmembrane anchored protein	NA	G9L6D9	Escherichia_phage	83.7	2.5e-14
WP_062955133.1|1397761_1398058_-	hypothetical protein	NA	T1SA06	Salmonella_phage	63.9	6.9e-24
>prophage 4
NZ_CP040533	Klebsiella pneumoniae strain CR-HvKP1 chromosome, complete genome	5390059	1406600	1411871	5390059	holin	Salmonella_phage(50.0%)	6	NA	NA
WP_077265603.1|1406600_1407917_+	right-handed parallel beta-helix repeat-containing protein	NA	A0A0K2FI18	Enterobacter_phage	32.3	2.3e-34
WP_062955010.1|1408003_1408408_+	hypothetical protein	NA	T1SA79	Salmonella_phage	81.1	8.7e-54
WP_023339240.1|1408394_1408700_+|holin	phage holin family protein	holin	A0A193GYK3	Enterobacter_phage	81.4	2.7e-39
WP_062955009.1|1408689_1409319_+	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	76.9	1.8e-90
WP_062955008.1|1409315_1409816_+	DUF2514 domain-containing protein	NA	Q858E9	Salmonella_phage	76.9	1.3e-59
WP_004152009.1|1410002_1411871_-	sulfatase-like hydrolase/transferase	NA	A0A2P0VMN7	Tetraselmis_virus	22.6	2.6e-07
>prophage 5
NZ_CP040533	Klebsiella pneumoniae strain CR-HvKP1 chromosome, complete genome	5390059	1742068	1748974	5390059	tRNA	Planktothrix_phage(33.33%)	6	NA	NA
WP_004175147.1|1742068_1742932_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
WP_004899467.1|1742942_1743716_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
WP_002912636.1|1743957_1744851_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
WP_004144192.1|1745096_1746458_-|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	94.8	1.8e-207
WP_004175198.1|1746776_1747499_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
WP_062955084.1|1747495_1748974_-	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	8.5e-30
>prophage 6
NZ_CP040533	Klebsiella pneumoniae strain CR-HvKP1 chromosome, complete genome	5390059	1791797	1805913	5390059		Enterobacteria_phage(36.36%)	15	NA	NA
WP_138381426.1|1791797_1792862_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.1	1.1e-103
WP_062956182.1|1792875_1793745_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	67.4	3.4e-111
WP_048996045.1|1793776_1794667_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	3.7e-28
WP_004175260.1|1794681_1795236_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	57.6	1.9e-51
WP_000704907.1|1795415_1796582_+	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	7.0e-112
WP_016947628.1|1797010_1797130_-	small membrane protein	NA	NA	NA	NA	NA
WP_062955151.1|1797530_1798535_-	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	29.2	4.0e-31
WP_075053193.1|1798490_1798772_+	hypothetical protein	NA	NA	NA	NA	NA
WP_073547076.1|1799374_1800439_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	55.0	2.6e-105
WP_062956182.1|1800452_1801322_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	67.4	3.4e-111
WP_048996045.1|1801353_1802244_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	3.7e-28
WP_015958693.1|1802258_1802813_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	57.6	1.9e-51
WP_094819161.1|1802899_1803730_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_062955124.1|1803758_1804592_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_062955125.1|1804581_1805913_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.1	6.9e-15
>prophage 7
NZ_CP040533	Klebsiella pneumoniae strain CR-HvKP1 chromosome, complete genome	5390059	2755174	2766061	5390059		Escherichia_phage(87.5%)	9	NA	NA
WP_004151613.1|2755174_2758282_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
WP_004151612.1|2758336_2759602_+	MFS transporter	NA	NA	NA	NA	NA
WP_001620097.1|2759632_2760721_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	100.0	8.0e-211
WP_002904006.1|2760807_2761068_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	97.7	3.5e-40
WP_004176269.1|2761365_2762226_+	class A broad-spectrum beta-lactamase SHV-11	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
WP_002210513.1|2762246_2763008_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_004151610.1|2763268_2764171_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.3	7.7e-159
WP_004151609.1|2764182_2765448_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.5	6.6e-233
WP_002210516.1|2765440_2766061_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 8
NZ_CP040533	Klebsiella pneumoniae strain CR-HvKP1 chromosome, complete genome	5390059	2995028	3099400	5390059	transposase,terminase,holin,integrase	Klebsiella_phage(22.89%)	135	3066209:3066224	3096706:3096721
WP_004152576.1|2995028_2995895_-	hypothetical protein	NA	A0A2H4IYR0	uncultured_Caudovirales_phage	64.5	1.9e-34
WP_004152575.1|2995894_2996668_-	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	54.4	2.8e-77
WP_004152574.1|2996664_2997861_-	hypothetical protein	NA	A0A0M4RD32	Salmonella_phage	72.9	3.9e-158
WP_004152573.1|2997860_2998214_-	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	80.3	2.3e-50
WP_004152572.1|2998215_2998869_-	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	63.5	1.0e-59
WP_004152571.1|2998922_2999489_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004173705.1|2999525_2999711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152570.1|2999763_3000105_-	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	46.6	1.8e-23
WP_004152569.1|3000104_3001127_-	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	54.2	9.2e-100
WP_004152568.1|3001129_3001432_-	hypothetical protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	55.2	2.0e-26
WP_004152567.1|3001432_3002032_-	hypothetical protein	NA	A0A2H4J1B3	uncultured_Caudovirales_phage	57.6	9.9e-54
WP_004152566.1|3002031_3004035_-	lytic transglycosylase domain-containing protein	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	63.6	1.2e-247
WP_004152565.1|3004024_3004177_-	hypothetical protein	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	88.0	7.6e-19
WP_004152564.1|3004212_3004638_-	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	63.4	2.6e-40
WP_004199809.1|3004641_3005082_-	DUF3277 family protein	NA	A0A0M5M1K6	Salmonella_phage	80.1	3.3e-62
WP_004152177.1|3005092_3006238_-	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	76.9	6.3e-166
WP_004152176.1|3006241_3006682_-	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	51.7	1.6e-40
WP_001116156.1|3006776_3007163_-	hypothetical protein	NA	A0A2H4J1A4	uncultured_Caudovirales_phage	78.2	1.1e-48
WP_000834982.1|3007162_3007669_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000113538.1|3007665_3008085_-	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	60.7	3.3e-40
WP_000725700.1|3008053_3008335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001132269.1|3008374_3009316_-	DUF2184 domain-containing protein	NA	A0A2H4J191	uncultured_Caudovirales_phage	77.1	1.7e-137
WP_000528476.1|3009327_3009822_-	hypothetical protein	NA	A0A2H4JHM9	uncultured_Caudovirales_phage	62.7	4.2e-50
WP_004199270.1|3009825_3011028_-	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	54.1	2.6e-106
WP_004152174.1|3011079_3011628_-	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	56.3	3.0e-49
WP_004152173.1|3011683_3013135_-	DUF1073 domain-containing protein	NA	A0A0M4S6U1	Salmonella_phage	68.8	3.8e-192
WP_004152172.1|3013372_3014773_-|terminase	PBSX family phage terminase large subunit	terminase	A0A077KAW0	Edwardsiella_phage	69.0	9.4e-188
WP_004152171.1|3014723_3015476_-	hypothetical protein	NA	A0A077KBY7	Edwardsiella_phage	66.0	4.0e-12
WP_004152170.1|3015577_3015898_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064754420.1|3015990_3016248_-	hypothetical protein	NA	S5FXQ4	Shigella_phage	70.9	2.3e-23
WP_004153952.1|3016132_3016522_-	lipase chaperone	NA	A0A192Y6H8	Salmonella_phage	49.2	9.4e-21
WP_004152169.1|3016518_3017049_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	77.1	2.7e-79
WP_004146526.1|3017051_3017300_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152167.1|3017705_3018488_-	antitermination protein	NA	F1C595	Cronobacter_phage	76.8	7.2e-113
WP_004198239.1|3018484_3018961_-	hypothetical protein	NA	A0A286N2Q1	Klebsiella_phage	100.0	1.8e-90
WP_004198233.1|3018957_3019920_-	zinc-binding domain of primase-helicase family protein	NA	A0A286N2Q0	Klebsiella_phage	99.4	4.8e-183
WP_004198228.1|3019921_3021580_-	DEAD/DEAH box helicase	NA	A0A286N2P9	Klebsiella_phage	96.0	0.0e+00
WP_004152163.1|3021888_3022182_-	hypothetical protein	NA	A0A286S2B5	Klebsiella_phage	97.6	2.8e-38
WP_004152162.1|3022156_3022378_-	helix-turn-helix transcriptional regulator	NA	A0A286S2C1	Klebsiella_phage	100.0	3.0e-32
WP_004152161.1|3022475_3023144_+	LexA family transcriptional regulator	NA	A0A286S2B2	Klebsiella_phage	99.5	2.4e-125
WP_004152160.1|3023314_3023629_+	hypothetical protein	NA	A0A286S1T9	Klebsiella_phage	100.0	1.0e-49
WP_004152159.1|3023621_3023810_+	hypothetical protein	NA	A0A286S1P8	Klebsiella_phage	100.0	4.6e-26
WP_004152158.1|3023979_3024345_+	hypothetical protein	NA	A0A286S1Q6	Klebsiella_phage	99.2	6.9e-58
WP_004152157.1|3024337_3024592_+	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	97.6	3.1e-41
WP_004177208.1|3024563_3024782_+	hypothetical protein	NA	A0A286S1P6	Klebsiella_phage	98.6	6.6e-32
WP_004152156.1|3024778_3025204_+	hypothetical protein	NA	A0A286S1S2	Klebsiella_phage	77.9	3.5e-53
WP_004152155.1|3025200_3025395_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152154.1|3025391_3026219_+	hypothetical protein	NA	Q8W654	Enterobacteria_phage	84.0	5.5e-111
WP_004152153.1|3026323_3026842_+	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	98.8	1.7e-94
WP_004154298.1|3026847_3027558_+	DNA-binding protein	NA	A0A286S260	Klebsiella_phage	88.3	2.1e-111
WP_004152151.1|3027547_3027772_+	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	89.2	3.1e-29
WP_004152150.1|3027768_3027981_+	hypothetical protein	NA	A0A286S2B6	Klebsiella_phage	98.6	3.4e-33
WP_004152149.1|3027977_3028457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152148.1|3028635_3028878_+	hypothetical protein	NA	A0A0M4RTZ2	Salmonella_phage	73.8	2.2e-20
WP_004152147.1|3028858_3030040_-|integrase	site-specific integrase	integrase	A0A0M4QX09	Salmonella_phage	84.2	5.6e-202
WP_016197745.1|3030236_3030785_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_004152145.1|3030983_3032516_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	30.0	1.1e-21
WP_004152144.1|3032732_3033494_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.5	2.4e-20
WP_004152143.1|3033602_3034517_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004176439.1|3034817_3035006_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152142.1|3035076_3035385_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_004218009.1|3035390_3035528_+	glycosyl hydrolase family 2	NA	NA	NA	NA	NA
WP_004152141.1|3035552_3036422_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	42.1	5.7e-50
WP_004218007.1|3036500_3037703_-	MFS transporter	NA	NA	NA	NA	NA
WP_004152139.1|3037775_3038912_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_004152138.1|3039084_3039969_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004152137.1|3040093_3040927_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152136.1|3041157_3041544_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_004152135.1|3041711_3043328_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004152134.1|3043513_3044221_+	murein tripeptide amidase MpaA	NA	NA	NA	NA	NA
WP_004152133.1|3044217_3045183_-	L-Ala-D/L-Glu epimerase	NA	NA	NA	NA	NA
WP_004152131.1|3045285_3045792_+	thiol peroxidase	NA	NA	NA	NA	NA
WP_085666574.1|3045862_3046885_-	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_002901979.1|3047016_3048558_-	transcriptional regulator TyrR	NA	NA	NA	NA	NA
WP_002901977.1|3048730_3050044_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
WP_071531198.1|3050175_3051057_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004152127.1|3051146_3052208_-	TIGR01620 family protein	NA	NA	NA	NA	NA
WP_002901917.1|3052204_3053602_-	YcjX family protein	NA	NA	NA	NA	NA
WP_002901915.1|3053704_3053923_-	phage shock protein PspD	NA	NA	NA	NA	NA
WP_002901913.1|3053951_3054311_-	envelope stress response membrane protein PspC	NA	NA	NA	NA	NA
WP_002901911.1|3054310_3054535_-	envelope stress response membrane protein PspB	NA	NA	NA	NA	NA
WP_002901908.1|3054590_3055259_-	phage shock protein PspA	NA	NA	NA	NA	NA
WP_002901905.1|3055426_3056401_+	phage shock protein operon transcriptional activator	NA	NA	NA	NA	NA
WP_002901901.1|3056391_3057783_-	MFS transporter	NA	NA	NA	NA	NA
WP_002901900.1|3057808_3058978_-	amidohydrolase	NA	NA	NA	NA	NA
WP_004152126.1|3059149_3061459_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004171423.1|3061437_3062268_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004152124.1|3062378_3063284_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002901817.1|3063617_3065261_+	peptide ABC transporter substrate-binding protein SapA	NA	NA	NA	NA	NA
WP_002901816.1|3065257_3066223_+	peptide ABC transporter permease SapB	NA	NA	NA	NA	NA
3066209:3066224	attL	TATGCCCTACGATAGC	NA	NA	NA	NA
WP_002901815.1|3066427_3067099_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.6	4.5e-79
WP_071531199.1|3067285_3068113_+	FRG domain-containing protein	NA	A0A1S6KZX9	Salmonella_phage	30.2	8.4e-19
WP_002901813.1|3068188_3069454_-	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	82.7	9.6e-208
WP_002901812.1|3069455_3069875_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	57.5	1.4e-35
WP_001067855.1|3071155_3071860_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_138381427.1|3071805_3072267_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009483812.1|3072266_3072518_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152776.1|3073164_3073587_-	hypothetical protein	NA	K7P834	Enterobacteria_phage	45.3	3.6e-26
WP_001067855.1|3074179_3074884_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000679427.1|3075499_3075847_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_001261740.1|3076010_3076802_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
WP_001067855.1|3077783_3078488_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_062955100.1|3078524_3078812_-	hypothetical protein	NA	A0A286N2Q7	Klebsiella_phage	95.4	4.4e-36
WP_004218565.1|3078808_3079348_-	glycoside hydrolase family 108 protein	NA	A0A286N2Q6	Klebsiella_phage	98.9	3.3e-101
WP_024940884.1|3079344_3079644_-|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	100.0	4.5e-47
WP_022644626.1|3080122_3081169_-|transposase	IS481-like element ISKpn28 family transposase	transposase	A0A0M3LR35	Mannheimia_phage	21.9	1.3e-05
WP_004232548.1|3081394_3082084_-	antiterminator-like protein	NA	I6PDF8	Cronobacter_phage	53.1	2.1e-55
WP_004218534.1|3082083_3082224_-	YlcG family protein	NA	NA	NA	NA	NA
WP_004218533.1|3082220_3082859_-	hypothetical protein	NA	H6WRY9	Salmonella_phage	69.8	3.2e-74
WP_004218532.1|3082851_3083520_-	serine/threonine protein phosphatase	NA	K7P6H8	Enterobacteria_phage	78.7	1.4e-104
WP_004243010.1|3083516_3083684_-	NinE family protein	NA	K7P7K0	Enterobacteria_phage	62.5	4.6e-09
WP_004218531.1|3083664_3084132_-	recombination protein NinB	NA	Q8VNP6	Enterobacteria_phage	45.8	3.4e-33
WP_004218530.1|3084652_3085681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004196831.1|3085888_3086134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004218528.1|3086189_3086492_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004201118.1|3086488_3087337_-	ATP-binding protein	NA	K7PLU3	Enterobacteria_phage	60.1	5.1e-88
WP_004201117.1|3087333_3088194_-	replication protein	NA	K7PGT1	Enterobacteria_phage	53.3	1.0e-59
WP_001548453.1|3088279_3088501_-	hypothetical protein	NA	G8EYH8	Enterobacteria_phage	41.7	6.9e-05
WP_004201115.1|3088541_3088769_-	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	77.1	1.4e-24
WP_004201113.1|3088880_3089579_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	84.1	3.7e-108
WP_019405077.1|3089601_3089721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004201109.1|3089866_3090943_+	ParA family protein	NA	H2BD62	Pseudomonas_phage	37.9	9.1e-58
WP_004201108.1|3091024_3091228_-	hypothetical protein	NA	A0A192Y6Q5	Salmonella_phage	71.6	3.9e-18
WP_004135674.1|3091656_3091851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004201105.1|3091939_3092224_+	host nuclease inhibitor GamL	NA	G8C7T1	Escherichia_phage	79.8	1.1e-39
WP_004201103.1|3092239_3093085_+	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	59.2	1.8e-69
WP_088224434.1|3093081_3093369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004201102.1|3093370_3094051_+	YqaJ viral recombinase family protein	NA	A0A0M3ULE0	Salmonella_phage	91.2	8.2e-121
WP_004151898.1|3094047_3094476_+	hypothetical protein	NA	M9NYX4	Enterobacteria_phage	80.3	7.5e-64
WP_004151899.1|3094472_3095135_+	DNA methyltransferase	NA	G8C7S6	Escherichia_phage	84.6	2.7e-105
WP_004190725.1|3095131_3095446_+	hypothetical protein	NA	K7PM28	Enterobacteria_phage	50.8	1.6e-10
WP_004153574.1|3095342_3096530_-|integrase	site-specific integrase	integrase	K7PGY1	Enterobacteria_phage	52.4	1.1e-120
WP_004151901.1|3096706_3097597_+	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
3096706:3096721	attR	TATGCCCTACGATAGC	NA	NA	NA	NA
WP_004140266.1|3097596_3098589_+	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	27.2	3.0e-07
WP_004140269.1|3098590_3099400_+	peptide ABC transporter ATP-binding protein SapF	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	2.1e-14
>prophage 9
NZ_CP040533	Klebsiella pneumoniae strain CR-HvKP1 chromosome, complete genome	5390059	3227072	3315921	5390059	terminase,portal,tail,head,tRNA,lysis,integrase	Klebsiella_phage(45.24%)	92	3253875:3253889	3313732:3313746
WP_002901088.1|3227072_3227573_+|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
WP_002901080.1|3227689_3228136_+	DUF441 domain-containing protein	NA	NA	NA	NA	NA
WP_002901073.1|3228119_3228911_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004150777.1|3229012_3230197_+	CynX/NimT family MFS transporter	NA	NA	NA	NA	NA
WP_004140471.1|3230228_3230921_-	CTP synthase	NA	NA	NA	NA	NA
WP_004150778.1|3231066_3231576_+	DUF523 domain-containing protein	NA	NA	NA	NA	NA
WP_004150779.1|3231562_3231919_+	DUF488 domain-containing protein	NA	NA	NA	NA	NA
WP_004150780.1|3231908_3232148_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
WP_004150781.1|3232448_3233462_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.0	1.4e-12
WP_004150782.1|3233519_3233621_+	YoaK family small membrane protein	NA	NA	NA	NA	NA
WP_099119317.1|3233620_3233695_+	protein YoaJ	NA	NA	NA	NA	NA
WP_004140488.1|3233812_3233938_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004140489.1|3233997_3234261_-	DUF2534 family protein	NA	NA	NA	NA	NA
WP_004150783.1|3234391_3235030_-	leucine efflux protein LeuE	NA	NA	NA	NA	NA
WP_004148038.1|3235119_3236034_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.1e-72
WP_004150784.1|3236695_3237739_-	type II asparaginase	NA	NA	NA	NA	NA
WP_004150785.1|3238041_3239250_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_004150787.1|3239323_3241108_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	36.1	5.8e-17
WP_004150788.1|3241114_3242005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004140497.1|3242125_3243634_+	UbiD family decarboxylase	NA	NA	NA	NA	NA
WP_004150790.1|3243944_3244631_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_004140501.1|3245028_3245208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150791.1|3245247_3245880_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_004140506.1|3246446_3246644_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004140509.1|3246759_3247770_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_004150793.1|3247766_3249173_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004140512.1|3249228_3250116_-	manganese catalase family protein	NA	NA	NA	NA	NA
WP_004140514.1|3250132_3250639_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004150794.1|3250665_3251160_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004150795.1|3251250_3251436_-	general stress protein	NA	NA	NA	NA	NA
WP_004140529.1|3252057_3253251_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_004140530.1|3253363_3253591_+	DUF1272 domain-containing protein	NA	NA	NA	NA	NA
3253875:3253889	attL	TGGCTGGCGTTCTTT	NA	NA	NA	NA
WP_004150797.1|3254027_3254351_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_004150798.1|3254343_3254736_+	amino acid-binding protein	NA	NA	NA	NA	NA
WP_004150799.1|3254732_3255446_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004892953.1|3255718_3255871_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.0	3.8e-18
WP_023328083.1|3256025_3257522_-|tail	tail fiber domain-containing protein	tail	A0A0P0IDN1	Klebsiella_phage	63.7	1.4e-125
WP_062955111.1|3257590_3270295_-	DUF1983 domain-containing protein	NA	Q6UAW1	Klebsiella_phage	47.1	0.0e+00
WP_023328085.1|3270357_3270951_-|tail	tail assembly protein	tail	K7PHE5	Enterobacteria_phage	76.6	8.0e-80
WP_047666390.1|3270977_3271400_-	hypothetical protein	NA	J9Q806	Salmonella_phage	50.0	5.9e-29
WP_047666389.1|3271441_3272152_-	peptidase P60	NA	Q6UAW4	Klebsiella_phage	90.3	1.9e-136
WP_023328087.1|3272153_3272909_-|tail	phage minor tail protein L	tail	Q6UAW5	Klebsiella_phage	80.5	4.6e-125
WP_023328088.1|3272905_3273244_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	88.4	1.4e-57
WP_023328089.1|3273243_3276579_-|tail	phage tail tape measure protein	tail	Q6UAW7	Klebsiella_phage	88.3	0.0e+00
WP_071836352.1|3276578_3276797_-	hypothetical protein	NA	Q6UAW9	Klebsiella_phage	90.5	5.4e-34
WP_014228914.1|3276811_3277177_-|tail	phage tail protein	tail	Q6UAW8	Klebsiella_phage	89.3	1.6e-51
WP_023328090.1|3277234_3277696_-	hypothetical protein	NA	Q6UAX0	Klebsiella_phage	83.7	7.8e-67
WP_023328091.1|3277727_3278129_-	hypothetical protein	NA	Q6UAX1	Klebsiella_phage	94.0	2.3e-62
WP_017880258.1|3278125_3278515_-	hypothetical protein	NA	Q6UAX2	Klebsiella_phage	86.0	9.6e-58
WP_023328092.1|3278495_3278834_-|head,tail	head-tail adaptor protein	head,tail	Q6UAX3	Klebsiella_phage	90.2	2.8e-53
WP_020317538.1|3278830_3279148_-|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6UAX4	Klebsiella_phage	89.8	1.5e-45
WP_049010370.1|3279128_3279389_-	hypothetical protein	NA	Q6UAX5	Klebsiella_phage	60.5	7.4e-22
WP_014907815.1|3280810_3281731_-	S49 family peptidase	NA	Q6UAX7	Klebsiella_phage	88.2	9.6e-149
WP_023279520.1|3281767_3283027_-|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	89.8	1.8e-222
WP_017898992.1|3283026_3283206_-	hypothetical protein	NA	Q6UAX9	Klebsiella_phage	57.6	3.1e-11
WP_021462603.1|3283199_3284921_-|terminase	terminase large subunit	terminase	Q7Y413	Yersinia_phage	57.4	1.5e-190
WP_012542168.1|3284920_3285355_-|terminase	phage terminase small subunit P27 family	terminase	A0A1J0GV10	Halomonas_phage	61.9	9.4e-30
WP_014907818.1|3285603_3286035_-	hypothetical protein	NA	Q6UAS0	Klebsiella_phage	61.6	1.8e-41
WP_023297386.1|3286031_3286355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032428746.1|3286306_3286669_-	HNH endonuclease	NA	Q6UAS2	Klebsiella_phage	83.3	1.2e-57
WP_032749552.1|3286995_3287220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049115059.1|3287258_3287696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016160650.1|3288645_3288996_-	hypothetical protein	NA	R9TPM9	Aeromonas_phage	38.1	7.9e-11
WP_032432826.1|3288992_3289490_-	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	84.6	1.1e-77
WP_016160648.1|3289489_3289705_-|lysis	phage S lysis protein	lysis	A5LH82	Enterobacteria_phage	88.7	2.7e-30
WP_004147999.1|3290622_3290772_+	small membrane protein	NA	NA	NA	NA	NA
WP_004147997.1|3291509_3291713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025861432.1|3291956_3292559_-	hypothetical protein	NA	H9C175	Pectobacterium_phage	68.6	1.1e-76
WP_062955112.1|3292575_3293607_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	49.6	4.7e-96
WP_017898980.1|3293606_3293810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025861428.1|3293806_3294199_-	DNA-binding protein	NA	K7PHB4	Enterobacterial_phage	36.6	8.0e-12
WP_077255782.1|3294239_3294530_-	hypothetical protein	NA	H6WRY6	Salmonella_phage	56.9	8.0e-17
WP_025368263.1|3294541_3294775_-	DinI family protein	NA	K7PM44	Enterobacteria_phage	71.1	3.7e-25
WP_062954989.1|3300749_3301619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062954977.1|3301707_3303099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032443841.1|3303447_3303888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047667474.1|3303901_3304366_-	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	72.2	4.1e-63
WP_077265602.1|3304358_3305363_-	DNA-binding protein	NA	A0A0U2RT81	Escherichia_phage	40.0	1.0e-31
WP_046622349.1|3305422_3305977_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071561166.1|3305979_3306204_-	Cro/Cl family transcriptional regulator	NA	H6WRX5	Salmonella_phage	62.5	1.3e-19
WP_077257742.1|3306292_3306730_+	helix-turn-helix domain-containing protein	NA	H6WRX4	Salmonella_phage	62.2	1.3e-39
WP_040234937.1|3307051_3307366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099143961.1|3307528_3307747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023279538.1|3307756_3307951_+	DUF1482 family protein	NA	NA	NA	NA	NA
WP_014228879.1|3307993_3308338_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_062954978.1|3308479_3310618_+	exodeoxyribonuclease VIII	NA	S4TNL0	Salmonella_phage	42.7	5.6e-99
WP_012542206.1|3310670_3310916_+	excisionase	NA	NA	NA	NA	NA
WP_032418030.1|3310896_3312024_+|integrase	tyrosine-type recombinase/integrase	integrase	O21925	Phage_21	58.4	4.4e-119
WP_004150800.1|3312141_3313392_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
WP_004150801.1|3313632_3314283_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
3313732:3313746	attR	AAAGAACGCCAGCCA	NA	NA	NA	NA
WP_004150802.1|3314299_3314758_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_004150803.1|3314814_3315921_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 10
NZ_CP040533	Klebsiella pneumoniae strain CR-HvKP1 chromosome, complete genome	5390059	3531879	3626740	5390059	plate,terminase,portal,tail,head,tRNA,lysis,integrase,capsid,protease	Salmonella_phage(55.93%)	96	3587405:3587423	3626815:3626833
WP_002898139.1|3531879_3533172_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.7	7.3e-94
WP_002898137.1|3533262_3534606_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.8	7.3e-81
WP_002898132.1|3534614_3535226_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_004150846.1|3535348_3539602_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.2	5.2e-88
WP_000228469.1|3539737_3540232_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
WP_004141839.1|3540737_3541733_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.0	3.3e-62
WP_002898017.1|3541847_3543614_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	25.9	2.3e-21
WP_004150847.1|3543614_3545336_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
WP_002898014.1|3545380_3546082_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_001040187.1|3546435_3546654_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_002896522.1|3546774_3549054_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
WP_002896520.1|3549084_3549402_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
WP_002896516.1|3549727_3549949_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
WP_004150848.1|3550025_3551966_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
WP_002896440.1|3551962_3553078_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
WP_002896437.1|3553224_3554883_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
WP_002896434.1|3555302_3555998_+	aquaporin Z	NA	NA	NA	NA	NA
WP_004147773.1|3556113_3557013_+	lysine exporter LysO family protein	NA	NA	NA	NA	NA
WP_002896412.1|3557156_3558809_+	hydroxylamine reductase	NA	NA	NA	NA	NA
WP_002896410.1|3558819_3559788_+	NADH oxidoreductase	NA	NA	NA	NA	NA
WP_002896408.1|3559999_3560434_-	DoxX family protein	NA	NA	NA	NA	NA
WP_002896406.1|3560585_3562304_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA	NA
WP_002896404.1|3562342_3563344_+	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_002896401.1|3563354_3564797_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002896399.1|3564884_3565898_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002896397.1|3565894_3566725_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B0UZW5	Roseobacter_phage	31.6	4.1e-05
WP_004150851.1|3566756_3567896_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_002896394.1|3568773_3569289_+	lipoprotein	NA	NA	NA	NA	NA
WP_032419144.1|3569515_3570244_+	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	37.1	1.2e-29
WP_002896390.1|3570264_3570996_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002896386.1|3571002_3571719_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA	NA
WP_004150852.1|3571718_3572387_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA	NA
WP_002896384.1|3572570_3573302_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002896382.1|3573344_3574817_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	31.8	7.9e-28
WP_002896380.1|3574813_3575530_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.9	2.1e-34
WP_002896378.1|3575608_3576736_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A2K5B251	Erysipelothrix_phage	25.6	1.3e-19
WP_002896376.1|3576777_3577266_-	DUF2593 family protein	NA	NA	NA	NA	NA
WP_002896372.1|3577323_3578169_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
WP_002896371.1|3578165_3579119_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA	NA
WP_002896370.1|3579129_3580263_-	putrescine ABC transporter ATP-binding subunit PotG	NA	G3M9Y6	Bacillus_virus	34.9	2.2e-30
WP_002896368.1|3580426_3581539_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
WP_002896365.1|3581887_3582367_-	YbjN domain-containing protein	NA	NA	NA	NA	NA
WP_002896363.1|3582455_3583358_-	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	35.3	2.0e-34
WP_002896354.1|3584179_3584467_-	YbjC family protein	NA	NA	NA	NA	NA
WP_002896352.1|3584669_3584933_+	GrxA family glutaredoxin	NA	A0A2I7SAE2	Vibrio_phage	73.1	1.6e-27
WP_002896351.1|3584939_3585323_-	membrane protein	NA	NA	NA	NA	NA
WP_004179131.1|3585589_3587275_+	aspartate:alanine antiporter	NA	NA	NA	NA	NA
3587405:3587423	attL	ATGGGTTTTTTGTTGCCTG	NA	NA	NA	NA
WP_000972391.1|3587494_3587713_-	transcriptional activator Ogr/delta	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
WP_002896225.1|3587804_3588905_-	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	87.4	4.9e-176
WP_002896224.1|3588901_3589387_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	75.6	7.2e-63
WP_002896222.1|3589383_3592011_-|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	42.0	5.6e-117
WP_002896220.1|3592003_3592123_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
WP_002896204.1|3592137_3592437_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	79.0	3.7e-33
WP_002896201.1|3592489_3593005_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	85.4	1.3e-81
WP_002896193.1|3593014_3594187_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	93.3	1.9e-210
WP_002896191.1|3594325_3595402_-|tail	phage tail protein	tail	Q37842	Escherichia_phage	44.8	1.2e-25
WP_002896188.1|3595431_3595635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002896186.1|3595631_3596363_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152882.1|3596366_3599318_-	hypothetical protein	NA	A0A2H4N7A3	Pectobacterium_phage	50.9	1.2e-06
WP_004150856.1|3599319_3599919_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	60.5	1.3e-58
WP_002896182.1|3599911_3600820_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	66.9	7.6e-106
WP_032441567.1|3600806_3601169_-|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	83.9	4.9e-48
WP_002896177.1|3601165_3601738_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	72.3	4.7e-77
WP_004150857.1|3601832_3602525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002896175.1|3602521_3602968_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	71.2	2.2e-50
WP_002896172.1|3602960_3603392_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	82.5	9.9e-64
WP_002896168.1|3603487_3603916_-|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	77.9	9.6e-51
WP_002896163.1|3603912_3604296_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	42.0	2.1e-17
WP_002896161.1|3604300_3604810_-	lysozyme	NA	E5G6N1	Salmonella_phage	83.4	2.1e-81
WP_002896158.1|3604790_3605006_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	90.1	3.6e-30
WP_002896155.1|3605009_3605213_-|tail	tail protein X	tail	A0A1S6KZY4	Salmonella_phage	88.1	1.3e-29
WP_002896151.1|3605212_3605677_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	8.4e-77
WP_000059191.1|3605772_3606423_-|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	96.3	8.7e-112
WP_002895972.1|3606426_3607485_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.1	1.1e-180
WP_002895967.1|3607501_3608335_-|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	88.8	6.3e-123
WP_004150858.1|3608477_3610244_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	99.0	0.0e+00
WP_002895959.1|3610243_3611269_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	86.7	7.6e-171
WP_004199124.1|3611330_3613073_-	AIPR family protein	NA	NA	NA	NA	NA
WP_000700647.1|3613348_3614026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001316229.1|3614140_3614446_-	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
WP_001154434.1|3614384_3614573_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	98.4	5.5e-27
WP_004152765.1|3614673_3616158_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_009483812.1|3616157_3616409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150862.1|3616636_3619051_-	replication endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
WP_004150863.1|3619047_3619905_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	95.4	2.0e-156
WP_000752622.1|3619901_3620129_-	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	98.7	6.0e-36
WP_004150864.1|3620128_3620362_-	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	96.1	4.1e-32
WP_000963473.1|3620429_3620771_-	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	99.1	4.6e-56
WP_000956179.1|3620734_3620935_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	97.0	1.6e-32
WP_000460893.1|3620942_3621452_-	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
WP_000188448.1|3621484_3621706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152885.1|3621851_3622730_+	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	39.9	1.7e-30
WP_004150866.1|3622741_3623686_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152765.1|3623784_3625269_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_009483812.1|3625268_3625520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004151720.1|3625687_3626740_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A218M4I3	Erwinia_phage	57.0	1.0e-106
3626815:3626833	attR	ATGGGTTTTTTGTTGCCTG	NA	NA	NA	NA
>prophage 11
NZ_CP040533	Klebsiella pneumoniae strain CR-HvKP1 chromosome, complete genome	5390059	4280032	4291799	5390059	integrase	Enterobacteria_phage(70.0%)	13	4280482:4280496	4303652:4303666
WP_004144574.1|4280032_4281136_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.5	4.8e-62
4280482:4280496	attL	CAATCTCTCCGCGCT	NA	NA	NA	NA
WP_002889940.1|4281146_4282400_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	44.9	8.9e-89
WP_094819114.1|4282752_4283943_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	62.4	1.9e-144
WP_004152029.1|4283930_4284881_+	AAA family ATPase	NA	A0A1X9IGI7	Lactococcus_phage	27.1	1.2e-13
WP_004152979.1|4284880_4285306_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152202.1|4285873_4286440_-	phage polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
WP_004152203.1|4286457_4286703_-	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
WP_062956184.1|4286699_4287437_-	hypothetical protein	NA	Q7M2A2	Enterobacteria_phage	59.4	1.9e-70
WP_002889915.1|4288092_4288359_+	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	71.6	2.6e-30
WP_024940872.1|4288355_4288913_+	ash family protein	NA	Q7M2A7	Enterobacteria_phage	70.4	1.8e-33
WP_002889911.1|4288909_4289137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002889897.1|4289133_4289454_+	DUF5375 domain-containing protein	NA	NA	NA	NA	NA
WP_002889890.1|4289465_4291799_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	82.2	0.0e+00
4303652:4303666	attR	CAATCTCTCCGCGCT	NA	NA	NA	NA
>prophage 1
NZ_CP040535	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-KPC, complete sequence	177591	0	7469	177591		Escherichia_phage(25.0%)	11	NA	NA
WP_004152353.1|587_1559_+	mediator of plasmid stability	NA	A0A222YXF2	Escherichia_phage	46.8	1.1e-73
WP_013214012.1|1561_2233_+	mediator of plasmid stability	NA	NA	NA	NA	NA
WP_001568040.1|2295_2526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001568041.1|2962_3664_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.2	1.6e-26
WP_001568042.1|3663_3885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001568043.1|3894_4314_+	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
WP_013214013.1|4367_5135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001568045.1|5815_6244_+	antirestriction protein	NA	NA	NA	NA	NA
WP_013214014.1|6286_6793_+	antirestriction protein	NA	G9FHQ1	Rhodococcus_virus	31.4	1.2e-07
WP_001568047.1|6835_7027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011977779.1|7214_7469_+	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	48.8	4.0e-12
>prophage 2
NZ_CP040535	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-KPC, complete sequence	177591	10507	90507	177591	protease,transposase	Escherichia_phage(34.15%)	102	NA	NA
WP_014343514.1|10507_11071_+	methyltransferase	NA	A0A2I7RHK4	Vibrio_phage	34.3	7.4e-19
WP_004161756.1|10965_11286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071531256.1|11404_11665_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014343512.1|11902_12445_+	single-stranded DNA-binding protein	NA	A0A0A0P1Q9	Enterobacteria_phage	76.7	4.6e-50
WP_001568055.1|12493_12742_+	DUF905 domain-containing protein	NA	NA	NA	NA	NA
WP_015493064.1|12811_14869_+	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	25.4	1.2e-21
WP_001568057.1|14913_15345_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
WP_001568058.1|15341_16070_+	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
WP_013023807.1|16066_16393_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343510.1|16448_16823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013609528.1|17006_18080_-|transposase	IS481-like element ISKpn28 family transposase	transposase	NA	NA	NA	NA
WP_014343509.1|18151_18310_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA	NA
WP_014343507.1|18619_18955_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040245921.1|19002_19275_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040245917.1|19271_19622_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343505.1|19636_19954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343501.1|20794_21151_+	hypothetical protein	NA	A0A248SL90	Klebsiella_phage	58.1	7.5e-25
WP_014343500.1|21211_21424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343499.1|21434_21659_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343498.1|21739_22060_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A088CBP5	Shigella_phage	39.5	1.5e-08
WP_004152721.1|22049_22328_+	helix-turn-helix transcriptional regulator	NA	O64356	Escherichia_phage	39.4	2.5e-07
WP_071531256.1|22774_23035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152492.1|23266_24088_+	DUF945 domain-containing protein	NA	K4F5L3	Cronobacter_phage	40.1	1.2e-44
WP_124044796.1|24135_24450_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014343495.1|24482_24968_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_013214017.1|25391_25775_+	relaxosome protein TraM	NA	NA	NA	NA	NA
WP_009483812.1|26459_26711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152765.1|26710_28195_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_004144426.1|28772_28943_+	TraY domain-containing protein	NA	NA	NA	NA	NA
WP_004194426.1|29004_29373_+	type IV conjugative transfer system pilin TraA	NA	NA	NA	NA	NA
WP_004144424.1|29386_29692_+	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
WP_001067855.1|30131_30836_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_008324180.1|30945_31320_-	hypothetical protein	NA	A0A248SL90	Klebsiella_phage	62.7	2.2e-27
WP_015493069.1|31945_32305_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008324183.1|32366_32690_-	hypothetical protein	NA	I3UM57	Rhodobacter_phage	38.1	6.0e-13
WP_008324185.1|32686_33415_-	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
WP_008324186.1|33411_33843_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
WP_015493071.1|35965_36196_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
WP_032072906.1|37173_37434_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	46.2	4.1e-12
WP_015493073.1|37620_37812_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015493074.1|37854_38361_-	antirestriction protein ArdA	NA	A0A1I9S7Y0	Rhodococcus_phage	31.8	4.8e-09
WP_015493075.1|38765_39545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015493076.1|39598_40018_-	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
WP_015493077.1|40028_40250_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211749.1|40249_40927_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.9	1.6e-28
WP_015493079.1|41285_41957_+	Gifsy-2 prophage protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	61.7	5.1e-83
WP_015493080.1|42136_42559_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	51.5	3.1e-30
WP_015493081.1|42558_43830_+	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	63.0	6.1e-154
WP_016479949.1|43965_44937_-	ParB/RepB/Spo0J family partition protein	NA	Q1MVJ4	Enterobacteria_phage	68.9	1.4e-113
WP_015493083.1|44933_46139_-	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	89.2	1.1e-205
WP_022652286.1|46501_47134_+	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	31.9	2.5e-07
WP_040219232.1|47187_47388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015493085.1|47534_48485_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	55.6	6.6e-76
WP_015493086.1|48481_49093_-	DUF2913 family protein	NA	NA	NA	NA	NA
WP_015493087.1|49089_49485_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000019473.1|49998_50979_+|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
WP_042934582.1|51630_52188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|52656_53361_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_001011939.1|53493_54135_-	type A-2 chloramphenicol O-acetyltransferase CatII	NA	G3CFL0	Escherichia_phage	45.9	7.3e-55
WP_001239317.1|54284_54785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|54864_55569_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_001550559.1|55602_56094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001446887.1|56200_56938_+	recombinase family protein	NA	NA	NA	NA	NA
WP_000743213.1|56934_57159_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000954592.1|57280_57457_+	DUF4102 domain-containing protein	NA	T1S9J3	Salmonella_phage	68.6	1.0e-06
WP_000427619.1|57638_58643_-|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
WP_042863651.1|58721_61688_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	72.8	0.0e+00
WP_001067855.1|61808_62513_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000205770.1|62757_63504_+	type-F conjugative transfer system pilin acetylase TraX	NA	A0A077JBM8	Xanthomonas_phage	30.9	4.2e-09
WP_000139328.1|63558_64119_+	fertility inhibition protein FinO	NA	NA	NA	NA	NA
WP_015059022.1|64250_64451_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032083981.1|64836_65436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001736714.1|65599_65830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001312851.1|66134_66284_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA	NA
WP_000083837.1|66567_66816_+	replication regulatory protein RepA	NA	NA	NA	NA	NA
WP_064765370.1|66816_67026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001375168.1|67060_67135_+	RepA leader peptide Tap	NA	NA	NA	NA	NA
WP_032495102.1|67127_67985_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA	NA
WP_012311408.1|68347_68734_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000616807.1|68923_69577_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000557619.1|69669_69927_+	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA	NA
WP_000439434.1|69928_70261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|71571_72276_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_013188475.1|72786_73662_+	class A extended-spectrum beta-lactamase CTX-M-65	NA	A0A1B0VBP7	Salmonella_phage	98.9	6.8e-152
WP_012579081.1|73741_74665_+|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	99.7	2.2e-177
WP_001067855.1|76415_77120_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_001067855.1|78230_78935_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_014839979.1|79000_79519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014839980.1|79523_79940_-	fosfomycin resistance glutathione transferase FosA3	NA	Q2LI91	Bacillus_phage	35.6	2.0e-08
WP_001067855.1|80325_81030_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000957857.1|81707_81896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_064441864.1|81987_82524_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	2.8e-84
WP_000027057.1|82706_83567_+	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_012372818.1|83736_84492_+	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA	NA
WP_001067855.1|84941_85646_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_071557810.1|85636_85777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001333089.1|87587_87869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000361389.1|87991_88342_-	protein stbB	NA	NA	NA	NA	NA
WP_000959884.1|88344_89307_-	plasmid segregation protein ParM	NA	A0A222YXF2	Escherichia_phage	53.9	4.1e-94
WP_032146011.1|89453_89747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072109530.1|89687_89867_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000085883.1|89823_90507_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	37.4	5.6e-29
>prophage 3
NZ_CP040535	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-KPC, complete sequence	177591	93817	95485	177591		Pseudomonas_phage(100.0%)	1	NA	NA
WP_012372796.1|93817_95485_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	53.3	1.7e-164
>prophage 4
NZ_CP040535	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-KPC, complete sequence	177591	98574	100508	177591		Thalassomonas_phage(50.0%)	5	NA	NA
WP_015059007.1|98574_99138_+	class I SAM-dependent methyltransferase	NA	A8HNV9	Thalassomonas_phage	37.3	6.1e-21
WP_021537720.1|99137_99386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072206670.1|99289_99505_+	transporter	NA	NA	NA	NA	NA
WP_012881134.1|99679_99916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000290834.1|99980_100508_+	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	74.4	6.0e-47
>prophage 5
NZ_CP040535	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-KPC, complete sequence	177591	105861	106683	177591		Yersinia_phage(100.0%)	1	NA	NA
WP_001234445.1|105861_106683_+	DUF945 domain-containing protein	NA	A0A2C9CYF8	Yersinia_phage	38.2	3.4e-44
>prophage 6
NZ_CP040535	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-KPC, complete sequence	177591	113340	161340	177591	transposase	Escherichia_phage(25.0%)	51	NA	NA
WP_001067855.1|113340_114045_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_071177725.1|114078_119214_-	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA	NA
WP_059274178.1|119213_121430_-	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA	NA
WP_015059020.1|121480_122218_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021559024.1|122420_123152_-	complement resistance protein TraT	NA	NA	NA	NA	NA
WP_000632668.1|123176_123698_-	conjugal transfer entry exclusion protein TraS	NA	NA	NA	NA	NA
WP_015059018.1|123730_126547_-	conjugal transfer mating pair stabilization protein TraG	NA	NA	NA	NA	NA
WP_000944325.1|126543_127917_-	conjugal transfer protein TraH	NA	NA	NA	NA	NA
WP_000126338.1|127903_128296_-	F-type conjugal transfer protein TrbF	NA	NA	NA	NA	NA
WP_071776752.1|128249_128624_-	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA	NA
WP_000059817.1|128553_129099_-	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA	NA	NA	NA	NA
WP_000549793.1|129085_129367_-	type-F conjugative transfer system pilin chaperone TraQ	NA	NA	NA	NA	NA
WP_015059017.1|129482_130226_-	type-F conjugative transfer system pilin assembly protein TraF	NA	NA	NA	NA	NA
WP_053913405.1|130218_130476_-	conjugal transfer protein TrbE	NA	NA	NA	NA	NA
WP_015059015.1|130502_132353_-	type-F conjugative transfer system mating-pair stabilization protein TraN	NA	NA	NA	NA	NA
WP_001229309.1|132349_132772_-	HNH endonuclease	NA	C6ZR29	Salmonella_phage	86.8	9.4e-67
WP_000056336.1|132797_133169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000087532.1|133165_133804_-	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA	NA
WP_015059014.1|133830_134352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000412447.1|134414_134723_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000830838.1|134749_135742_-	conjugal transfer pilus assembly protein TraU	NA	NA	NA	NA	NA
WP_001203735.1|135738_136371_-	type-F conjugative transfer system protein TraW	NA	NA	NA	NA	NA
WP_015059013.1|136367_136754_-	type-F conjugative transfer system protein TrbI	NA	NA	NA	NA	NA
WP_015059012.1|136750_139378_-	type IV secretion system protein TraC	NA	NA	NA	NA	NA
WP_001278692.1|139537_139759_-	conjugal transfer protein TraR	NA	A2I309	Vibrio_virus	39.4	4.4e-07
WP_062955122.1|139893_140409_-	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA	NA
WP_001038341.1|140405_140657_-	conjugal transfer protein TrbG	NA	NA	NA	NA	NA
WP_001352845.1|140668_140899_-	conjugal transfer protein TrbD	NA	NA	NA	NA	NA
WP_094819167.1|140852_141098_-	traP family protein	NA	NA	NA	NA	NA
WP_001067855.1|141155_141860_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_013213987.1|142200_142497_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_004199234.1|143731_144613_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	NA	A0A1B0VBP7	Salmonella_phage	52.2	2.2e-73
WP_013213985.1|144888_145869_-|transposase	IS481-like element ISKpn27 family transposase	transposase	A8RHK4	Spiroplasma_virus	27.4	2.9e-10
WP_014343468.1|145991_146465_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	99.3	3.3e-76
WP_001067855.1|146504_147209_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000204520.1|148520_149228_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_000993386.1|149224_149461_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA	NA
WP_001277456.1|149457_149820_-	mercury resistance co-regulator MerD	NA	NA	NA	NA	NA
WP_000105636.1|149837_151532_-	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	8.8e-39
WP_001340589.1|151583_152006_-	organomercurial transporter MerC	NA	NA	NA	NA	NA
WP_000732292.1|152041_152317_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA	NA
WP_001294663.1|152330_152681_-	mercuric transport protein MerT	NA	NA	NA	NA	NA
WP_000429836.1|152752_153187_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_000427619.1|153265_154270_+|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
WP_004213594.1|154555_155050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004213850.1|155283_156207_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	92.8	1.7e-166
WP_048333570.1|156273_156744_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048333569.1|158287_158731_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004213850.1|158939_159863_+|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	92.8	1.7e-166
WP_023302802.1|160414_160846_+	silver-binding protein SilE	NA	NA	NA	NA	NA
WP_004213569.1|160989_161340_+	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	53.3	3.2e-20
>prophage 7
NZ_CP040535	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-KPC, complete sequence	177591	168249	176036	177591	integrase	Escherichia_phage(50.0%)	7	159952:159966	173644:173658
159952:159966	attL	GAAGAACATTTATCA	NA	NA	NA	NA
WP_013214009.1|168249_169029_+|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	92.0	5.4e-52
WP_013214010.1|169074_169332_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004118283.1|170109_170976_+	replication initiation protein	NA	A0A222YYK1	Escherichia_phage	31.1	1.5e-23
WP_011977818.1|172072_173278_+	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.3	5.3e-163
WP_086523286.1|173274_174252_+	ParB/RepB/Spo0J family partition protein	NA	Q38420	Escherichia_phage	53.8	1.4e-86
173644:173658	attR	GAAGAACATTTATCA	NA	NA	NA	NA
WP_013214011.1|174333_175605_-	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	63.7	7.5e-152
WP_001568036.1|175604_176036_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	53.3	2.1e-29
>prophage 1
NZ_CP040534	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-VIR, complete sequence	177790	15236	59893	177790	integrase,transposase	Enterobacteria_phage(20.0%)	36	NA	NA
WP_004213558.1|15236_16166_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	52.4	5.6e-72
WP_004213560.1|16310_17090_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	89.4	6.0e-51
WP_077250520.1|17086_17899_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004213565.1|18831_19806_-	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA	NA
WP_023302803.1|20442_21351_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_004213569.1|21737_22088_-	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	53.3	3.2e-20
WP_023302802.1|22231_22663_-	silver-binding protein SilE	NA	NA	NA	NA	NA
WP_004213850.1|23214_24138_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	92.8	1.7e-166
WP_048333569.1|24346_24790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048333570.1|26333_26804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004213850.1|26870_27794_+|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	92.8	1.7e-166
WP_004213594.1|28027_28522_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000427619.1|28807_29812_-|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
WP_000405672.1|29902_30337_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_004213585.1|30422_32828_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	46.1	1.0e-141
WP_000118563.1|32824_33901_+	signal peptidase II	NA	NA	NA	NA	NA
WP_004213590.1|34030_34588_+	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	81.3	2.6e-48
WP_004213592.1|34590_37560_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	73.3	0.0e+00
WP_000427619.1|37638_38643_+|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
WP_004152084.1|39170_40571_-	copper resistance membrane spanning protein PcoS	NA	W8CYF6	Bacillus_phage	26.3	4.1e-18
WP_001188930.1|40567_41248_-	copper response regulator transcription factor PcoR	NA	W8CYM9	Bacillus_phage	34.4	8.7e-30
WP_004213583.1|41302_42232_-	copper resistance inner membrane protein PcoD	NA	NA	NA	NA	NA
WP_000025662.1|42236_42617_-	copper resistance system metallochaperone PcoC	NA	NA	NA	NA	NA
WP_011251290.1|42656_43553_-	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA	NA
WP_004213580.1|43552_45370_-	multicopper oxidase PcoA	NA	NA	NA	NA	NA
WP_001023257.1|45603_46053_+	copper resistance protein	NA	NA	NA	NA	NA
WP_004118669.1|46341_47079_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A2H4JAF5	uncultured_Caudovirales_phage	32.5	1.2e-11
WP_000843497.1|47112_47310_-	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
WP_004098955.1|47350_49798_-	Ag(+)-translocating P-type ATPase SilP	NA	A0A218MNH6	uncultured_virus	35.8	7.6e-84
WP_000758228.1|49924_50365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004098958.1|50451_53598_-	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	S5VTK5	Leptospira_phage	22.5	4.0e-61
WP_004213579.1|53608_54901_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA	NA
WP_004213578.1|55014_55377_-	cation efflux system protein CusF	NA	NA	NA	NA	NA
WP_004213577.1|55405_56791_-	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA	NA
WP_004213574.1|56980_57661_+	copper/silver response regulator transcription factor SilR	NA	W8CYM9	Bacillus_phage	35.7	1.3e-30
WP_004213850.1|58969_59893_+|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	92.8	1.7e-166
>prophage 2
NZ_CP040534	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-VIR, complete sequence	177790	112235	177061	177790	integrase,transposase,protease	Caulobacter_phage(14.29%)	60	117944:117959	173039:173054
WP_004225018.1|112235_113231_+|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	28.7	3.1e-20
WP_004210218.1|113436_114450_-	NAD(P)-dependent alcohol dehydrogenase	NA	M1PHA2	Moumouvirus	26.0	5.8e-06
WP_004210220.1|114562_115090_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_077250518.1|115103_118061_+|transposase	Tn3 family transposase	transposase	A0A125RQ78	Bacillus_phage	22.8	2.3e-50
117944:117959	attL	GCAGCAGAGAATGACA	NA	NA	NA	NA
WP_004144375.1|118902_119763_+	alpha/beta hydrolase	NA	A2RQC8	Archaeal_BJ1_virus	21.7	9.0e-08
WP_011251321.1|121494_122130_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_011251320.1|122466_123708_-	tellurium resistance protein TerF	NA	A0A2D1GNA9	Pseudoalteromonas_phage	27.2	2.2e-10
WP_000301240.1|123792_124368_-	tellurium resistance cAMP binding protein TerE	NA	K4JRX3	Caulobacter_phage	41.6	9.6e-30
WP_004026609.1|124454_125033_-	tellurium resistance membrane protein TerD	NA	K4JRX3	Caulobacter_phage	40.8	1.9e-33
WP_094819126.1|125071_126112_-	tellurium resistance membrane protein TerC	NA	K7QKE8	Escherichia_phage	46.5	8.2e-72
WP_004026604.1|126135_126591_-	tellurium resistance membrane protein TerB	NA	NA	NA	NA	NA
WP_025368659.1|126613_127765_-	tellurium resistance system protein TerA	NA	NA	NA	NA	NA
WP_004210240.1|127761_128346_-	tellurium resistance protein	NA	K4JRX3	Caulobacter_phage	29.9	1.8e-12
WP_023302789.1|128657_129716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094819125.1|129727_130870_+	adenine/guanine phosphoribosyltransferase	NA	A0A172Q0Y1	Acinetobacter_phage	28.0	8.3e-33
WP_004181732.1|130862_131636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004210251.1|131637_132717_+|protease	cysteine protease StiP family protein	protease	A0A172Q0S8	Acinetobacter_phage	33.8	1.1e-39
WP_014386544.1|132716_133673_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA	NA
WP_025368657.1|133683_134907_+	DUF4236 domain-containing protein	NA	NA	NA	NA	NA
WP_004026591.1|134909_135368_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_004210261.1|135847_136486_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_004026586.1|136510_137152_+	TerD family protein	NA	A0A2P1N0C0	Streptomyces_phage	25.1	2.4e-05
WP_004026585.1|137152_137791_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_094819130.1|137883_138924_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_060611417.1|138923_140657_+	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA	NA
WP_004196935.1|140684_142184_+	kinase	NA	NA	NA	NA	NA
WP_004196929.1|142562_143045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038992151.1|143320_143725_-	DUF2251 domain-containing protein	NA	NA	NA	NA	NA
WP_094819124.1|144405_144684_-	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_040222849.1|144777_144990_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011251308.1|145456_145783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011251307.1|146020_147520_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.1	1.8e-35
WP_004210292.1|147500_148766_-	MSMEG_0569 family flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011154627.1|148783_149074_-	MSMEG_0570 family nitrogen starvation response protein	NA	NA	NA	NA	NA
WP_004210297.1|149085_150048_-	sll0787 family AIR synthase-like protein	NA	NA	NA	NA	NA
WP_004210298.1|150044_150608_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_004210300.1|150618_151728_-	MSMEG_0568 family radical SAM protein	NA	NA	NA	NA	NA
WP_004902273.1|151687_152689_-	Nit6803 family nitriliase	NA	NA	NA	NA	NA
WP_004210304.1|152702_153185_-	MSMEG_0572 family nitrogen starvation response protein	NA	NA	NA	NA	NA
WP_004210305.1|153551_154952_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_004118067.1|155327_155531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004186895.1|155560_155875_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004026565.1|156117_156570_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029884537.1|159086_160163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004213836.1|161305_161560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009483812.1|161826_162078_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152765.1|162077_163562_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_004213833.1|163647_164784_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_004213829.1|164849_165167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004197568.1|165318_165642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011251302.1|166393_167353_-	DNA replication protein	NA	NA	NA	NA	NA
WP_004186937.1|167395_167803_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004213821.1|167812_168256_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004213807.1|169632_170601_+|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	28.8	7.3e-14
WP_004902302.1|170928_172521_-|transposase	IS66-like element ISKox1 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	61.8	3.2e-176
WP_004189161.1|172551_172902_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZBY2	Stx2-converting_phage	63.8	5.2e-39
WP_004215130.1|172898_173339_-	IS66 family insertion sequence hypothetical protein	NA	Q6H9S5	Enterobacteria_phage	53.8	4.4e-19
173039:173054	attR	TGTCATTCTCTGCTGC	NA	NA	NA	NA
WP_004902307.1|173535_173718_+	DUF4113 domain-containing protein	NA	A0A1W6JNT0	Morganella_phage	57.1	9.1e-11
WP_004117790.1|174923_175895_-	ParB/RepB/Spo0J family plasmid partition protein	NA	I3WF22	Macacine_betaherpesvirus	86.9	7.0e-150
WP_004211841.1|175894_177061_-	plasmid-partitioning protein SopA	NA	A0A2I6B2X3	Macacine_betaherpesvirus	97.4	2.0e-223
>prophage 1
NZ_CP040536	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-p3, complete sequence	99717	18072	27285	99717	transposase	Escherichia_phage(37.5%)	13	NA	NA
WP_004187394.1|18072_18321_-	helix-turn-helix transcriptional regulator	NA	A0A248SLB9	Klebsiella_phage	53.0	1.6e-10
WP_004187397.1|18317_18779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|19432_20137_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000239529.1|20428_20704_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000633913.1|20697_21342_-	AAA family ATPase	NA	A0A222YXS3	Escherichia_phage	43.0	1.9e-39
WP_001103690.1|21570_22542_+	hypothetical protein	NA	A0A222YXF2	Escherichia_phage	42.9	7.4e-67
WP_000340829.1|22546_22939_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000457523.1|22943_24215_-	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	60.5	1.9e-142
WP_000109071.1|24214_24652_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	48.4	8.3e-26
WP_000618110.1|24648_24897_-	DinI-like family protein	NA	Q2A098	Sodalis_phage	48.0	1.9e-14
WP_032072581.1|25007_25277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072748701.1|25314_26217_+	DUF1281 domain-containing protein	NA	NA	NA	NA	NA
WP_000086148.1|26601_27285_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.4	1.1e-29
>prophage 2
NZ_CP040536	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-p3, complete sequence	99717	30548	38978	99717		Pseudomonas_phage(16.67%)	9	NA	NA
WP_012372796.1|30548_32216_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	53.3	1.7e-164
WP_032158038.1|32929_33436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001276107.1|33382_33910_+	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	73.5	3.5e-47
WP_000006020.1|33967_34201_+	DUF905 domain-containing protein	NA	A0A096XUX0	Cronobacter_phage	53.2	1.7e-06
WP_001145485.1|34259_36218_+	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	29.4	7.3e-21
WP_001387500.1|36272_36707_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
WP_001276270.1|36703_37423_+	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
WP_001579745.1|37419_37878_+	hypothetical protein	NA	A0A0N7KZV3	Escherichia_phage	56.6	9.0e-15
WP_001396784.1|38087_38978_+	DUF1472 domain-containing protein	NA	G9FHQ1	Rhodococcus_virus	27.3	4.3e-05
