assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_005860925.2_ASM586092v2	NZ_CP054031	Rhizobium sp. JKLM13E chromosome, complete genome	1	829135-829220	1	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	GCAGCACCGAAGAAGAAGGCTGC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh	NA|156aa|up_5|NZ_CP054031.1_822092_822560_+,NA|58aa|down_7|NZ_CP054031.1_838569_838743_+,NA|111aa|down_8|NZ_CP054031.1_838739_839072_+	NA|116aa|up_9|NZ_CP054031.1_817836_818184_+	COG1862, YajC, Preprotein translocase subunit YajC [Intracellular trafficking and secretion]	NA|847aa|up_8|NZ_CP054031.1_818229_820770_+	PRK14726, PRK14726, protein translocase subunit SecDF	NA|129aa|up_7|NZ_CP054031.1_820774_821161_+	COG3737, COG3737, Uncharacterized conserved protein [Function unknown]	NA|286aa|up_6|NZ_CP054031.1_821163_822021_+	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism]	NA|156aa|up_5|NZ_CP054031.1_822092_822560_+	NA	NA|478aa|up_4|NZ_CP054031.1_822663_824097_-	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed	NA|48aa|up_3|NZ_CP054031.1_824190_824334_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|49aa|up_2|NZ_CP054031.1_824628_824775_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|368aa|up_1|NZ_CP054031.1_825643_826747_+	COG4872, COG4872, Predicted membrane protein [Function unknown]	NA|197aa|up_0|NZ_CP054031.1_826743_827334_+	pfam14345, GDYXXLXY, GDYXXLXY protein	NA|141aa|down_0|NZ_CP054031.1_829434_829857_+	COG3631, COG3631, Ketosteroid isomerase-related protein [General function prediction only]	NA|590aa|down_1|NZ_CP054031.1_829976_831746_-	smart00729, Elp3, Elongator protein 3, MiaB family, Radical SAM	NA|270aa|down_2|NZ_CP054031.1_831906_832716_-	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1	NA|469aa|down_3|NZ_CP054031.1_832874_834281_-	PRK05249, PRK05249, Si-specific NAD(P)(+) transhydrogenase	NA|396aa|down_4|NZ_CP054031.1_834500_835688_-	pfam01070, FMN_dh, FMN-dependent dehydrogenase	NA|279aa|down_5|NZ_CP054031.1_836697_837534_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|220aa|down_6|NZ_CP054031.1_837782_838442_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|58aa|down_7|NZ_CP054031.1_838569_838743_+	NA	NA|111aa|down_8|NZ_CP054031.1_838739_839072_+	NA	NA|165aa|down_9|NZ_CP054031.1_839008_839503_-	PRK00109, PRK00109, Holliday junction resolvase RuvX
GCF_005860925.2_ASM586092v2	NZ_CP054031	Rhizobium sp. JKLM13E chromosome, complete genome	2	1264718-1264860	2	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	CCTATTCCAGCGATTACACCAACGACAGCGACGGCTTCGCCCCGAGC	47	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh	NA,NA|235aa|down_2|NZ_CP054031.1_1267239_1267944_+,NA|153aa|down_9|NZ_CP054031.1_1273767_1274226_-	NA|468aa|up_9|NZ_CP054031.1_1255089_1256493_-	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form	NA|146aa|up_8|NZ_CP054031.1_1256846_1257284_+	cd08353, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|400aa|up_7|NZ_CP054031.1_1257285_1258485_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|150aa|up_6|NZ_CP054031.1_1258649_1259099_+	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase	NA|255aa|up_5|NZ_CP054031.1_1259336_1260101_+	COG3821, COG3821, Predicted membrane protein [Function unknown]	NA|330aa|up_4|NZ_CP054031.1_1260100_1261090_+	pfam07786, DUF1624, Protein of unknown function (DUF1624)	NA|131aa|up_3|NZ_CP054031.1_1261114_1261507_-	cd04776, HTH_GnyR, Helix-Turn-Helix DNA binding domain of the regulatory protein GnyR	NA|472aa|up_2|NZ_CP054031.1_1261571_1262987_-	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|165aa|up_1|NZ_CP054031.1_1263229_1263724_+	PRK12846, PRK12846, peptide deformylase; Reviewed	NA|173aa|up_0|NZ_CP054031.1_1263807_1264326_+	pfam04972, BON, BON domain	NA|240aa|down_0|NZ_CP054031.1_1265108_1265828_-	PRK14341, PRK14341, lipoyl(octanoyl) transferase LipB	NA|317aa|down_1|NZ_CP054031.1_1266191_1267142_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|235aa|down_2|NZ_CP054031.1_1267239_1267944_+	NA	NA|674aa|down_3|NZ_CP054031.1_1268019_1270041_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|158aa|down_4|NZ_CP054031.1_1270176_1270650_+	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|156aa|down_5|NZ_CP054031.1_1270660_1271128_+	PRK00124, PRK00124, YaiI/YqxD family protein	NA|105aa|down_6|NZ_CP054031.1_1271296_1271611_+	PRK11431, PRK11431, quaternary ammonium compound efflux SMR transporter SugE	NA|131aa|down_7|NZ_CP054031.1_1271653_1272046_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|511aa|down_8|NZ_CP054031.1_1272185_1273718_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|153aa|down_9|NZ_CP054031.1_1273767_1274226_-	NA
GCF_005860925.2_ASM586092v2	NZ_CP054031	Rhizobium sp. JKLM13E chromosome, complete genome	3	4538823-4538905	3	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	CTAAAGCATGTCGCGCAAAAGTGTG	25	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh	NA|185aa|up_5|NZ_CP054031.1_4531882_4532437_+,NA|295aa|down_9|NZ_CP054031.1_4547538_4548423_+	NA|128aa|up_9|NZ_CP054031.1_4526954_4527338_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|475aa|up_8|NZ_CP054031.1_4527448_4528873_-	PRK10504, PRK10504, putative transporter; Provisional	NA|331aa|up_7|NZ_CP054031.1_4529124_4530117_+	cd07720, OPHC2-like_MBL-fold, Pseudomonas pseudoalcaligenes organophosphorus hydrolase C2, and related proteins; MBL-fold metallo hydrolase domain	NA|495aa|up_6|NZ_CP054031.1_4530395_4531880_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|185aa|up_5|NZ_CP054031.1_4531882_4532437_+	NA	NA|139aa|up_4|NZ_CP054031.1_4532599_4533016_+	COG5331, COG5331, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1031aa|up_3|NZ_CP054031.1_4533303_4536396_+	COG4625, COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain [Function unknown]	NA|226aa|up_2|NZ_CP054031.1_4536574_4537252_+	pfam17928, TetR_C_22, Tetracyclin repressor-like, C-terminal domain	NA|323aa|up_1|NZ_CP054031.1_4537258_4538227_-	PRK15092, PRK15092, DNA-binding transcriptional repressor LrhA; Provisional	NA|100aa|up_0|NZ_CP054031.1_4538428_4538728_+	pfam06568, DUF1127, Domain of unknown function (DUF1127)	NA|289aa|down_0|NZ_CP054031.1_4538992_4539859_-	COG5403, COG5403, Uncharacterized conserved protein [Function unknown]	NA|110aa|down_1|NZ_CP054031.1_4540034_4540364_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|340aa|down_2|NZ_CP054031.1_4540420_4541440_-	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase	NA|265aa|down_3|NZ_CP054031.1_4541469_4542264_-	COG3622, Hfi, Hydroxypyruvate isomerase [Carbohydrate transport and metabolism]	NA|263aa|down_4|NZ_CP054031.1_4542341_4543130_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|374aa|down_5|NZ_CP054031.1_4543129_4544251_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|317aa|down_6|NZ_CP054031.1_4544356_4545307_-	cd06312, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems	NA|332aa|down_7|NZ_CP054031.1_4545489_4546485_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|304aa|down_8|NZ_CP054031.1_4546560_4547472_+	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase	NA|295aa|down_9|NZ_CP054031.1_4547538_4548423_+	NA
