assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	1	8232-8337	1	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	TAGTCCCTCCTTTTGTCGGGATCCCC	26	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|294aa|up_6|NZ_CP040505.1_1458_2340_+,NA|87aa|up_2|NZ_CP040505.1_6431_6692_+,NA|121aa|down_4|NZ_CP040505.1_16088_16451_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|294aa|up_6|NZ_CP040505.1_1458_2340_+	NA	NA|101aa|up_5|NZ_CP040505.1_2455_2758_+	COG1254, AcyP, Acylphosphatases [Energy production and conversion]	NA|279aa|up_4|NZ_CP040505.1_2891_3728_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|849aa|up_3|NZ_CP040505.1_3892_6439_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|87aa|up_2|NZ_CP040505.1_6431_6692_+	NA	NA|82aa|up_1|NZ_CP040505.1_7068_7314_-	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|95aa|up_0|NZ_CP040505.1_7786_8071_-	pfam02583, Trns_repr_metal, Metal-sensitive transcriptional repressor	NA|553aa|down_0|NZ_CP040505.1_8851_10510_+	pfam02956, TT_ORF1, TT viral orf 1	NA|577aa|down_1|NZ_CP040505.1_11491_13222_+	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	NA|491aa|down_2|NZ_CP040505.1_13422_14895_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|235aa|down_3|NZ_CP040505.1_14983_15688_-	COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown]	NA|121aa|down_4|NZ_CP040505.1_16088_16451_+	NA	NA|572aa|down_5|NZ_CP040505.1_16454_18170_+	cd00519, Lipase_3, Lipase (class 3)	NA|268aa|down_6|NZ_CP040505.1_18539_19343_+	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated	NA|221aa|down_7|NZ_CP040505.1_19339_20002_+	PRK00043, thiE, thiamine phosphate synthase	NA|269aa|down_8|NZ_CP040505.1_19998_20805_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|216aa|down_9|NZ_CP040505.1_20801_21449_+	cd19365, TenA_C-like, uncharacterized TenA_C proteins
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	2	47932-48023	2	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GGGCGGGCAGTGATCGACTCATGACAATGC	30	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|323aa|up_9|NZ_CP040505.1_36855_37824_-,NA|313aa|up_8|NZ_CP040505.1_37896_38835_+,NA|124aa|up_2|NZ_CP040505.1_44611_44983_+,NA|89aa|down_6|NZ_CP040505.1_57500_57767_-,NA|195aa|down_7|NZ_CP040505.1_58520_59105_+	NA|323aa|up_9|NZ_CP040505.1_36855_37824_-	NA	NA|313aa|up_8|NZ_CP040505.1_37896_38835_+	NA	NA|273aa|up_7|NZ_CP040505.1_39096_39915_-	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C	NA|299aa|up_6|NZ_CP040505.1_40302_41199_+	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|432aa|up_5|NZ_CP040505.1_41315_42611_+	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|456aa|up_4|NZ_CP040505.1_42607_43975_+	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|90aa|up_3|NZ_CP040505.1_44345_44615_+	pfam14029, DUF4244, Protein of unknown function (DUF4244)	NA|124aa|up_2|NZ_CP040505.1_44611_44983_+	NA	NA|133aa|up_1|NZ_CP040505.1_44943_45342_+	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein	NA|164aa|up_0|NZ_CP040505.1_45886_46378_-	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain	NA|323aa|down_0|NZ_CP040505.1_48062_49031_-	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|161aa|down_1|NZ_CP040505.1_51253_51736_-	cd17511, YbjN_AmyR-like, YbjN protein family is structurally similar to type III secretion system chaperones	NA|176aa|down_2|NZ_CP040505.1_51732_52260_-	cd17511, YbjN_AmyR-like, YbjN protein family is structurally similar to type III secretion system chaperones	NA|393aa|down_3|NZ_CP040505.1_52343_53522_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|627aa|down_4|NZ_CP040505.1_54001_55882_+	PRK08270, PRK08270, ribonucleoside triphosphate reductase	NA|259aa|down_5|NZ_CP040505.1_55905_56682_+	TIGR02495, RADICAL-ACTIVATING_ENZYME, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|89aa|down_6|NZ_CP040505.1_57500_57767_-	NA	NA|195aa|down_7|NZ_CP040505.1_58520_59105_+	NA	NA|382aa|down_8|NZ_CP040505.1_59352_60498_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|194aa|down_9|NZ_CP040505.1_60713_61295_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	3	68259-68347	3	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	AATGGCTCCGTTTGCGCGAAGCGGGCCC	28	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|89aa|up_9|NZ_CP040505.1_57500_57767_-,NA|195aa|up_8|NZ_CP040505.1_58520_59105_+,NA|133aa|up_1|NZ_CP040505.1_65755_66154_-,NA	NA|89aa|up_9|NZ_CP040505.1_57500_57767_-	NA	NA|195aa|up_8|NZ_CP040505.1_58520_59105_+	NA	NA|382aa|up_7|NZ_CP040505.1_59352_60498_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|194aa|up_6|NZ_CP040505.1_60713_61295_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|335aa|up_5|NZ_CP040505.1_62107_63112_-	pfam09949, DUF2183, Uncharacterized conserved protein (DUF2183)	NA|406aa|up_4|NZ_CP040505.1_63571_64789_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|119aa|up_3|NZ_CP040505.1_65126_65483_-	pfam10049, DUF2283, Protein of unknown function (DUF2283)	NA|80aa|up_2|NZ_CP040505.1_65509_65749_-	pfam14076, DUF4258, Domain of unknown function (DUF4258)	NA|133aa|up_1|NZ_CP040505.1_65755_66154_-	NA	NA|557aa|up_0|NZ_CP040505.1_66517_68188_-	PRK07564, PRK07564, phosphoglucomutase; Validated	NA|447aa|down_0|NZ_CP040505.1_68758_70099_+	pfam07221, GlcNAc_2-epim, N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	NA|389aa|down_1|NZ_CP040505.1_70921_72088_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|199aa|down_2|NZ_CP040505.1_72985_73582_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|267aa|down_3|NZ_CP040505.1_77567_78368_-	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|316aa|down_4|NZ_CP040505.1_78367_79315_-	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|332aa|down_5|NZ_CP040505.1_79885_80881_-	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|439aa|down_6|NZ_CP040505.1_81240_82557_+	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|350aa|down_7|NZ_CP040505.1_82754_83804_+	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|470aa|down_8|NZ_CP040505.1_84168_85578_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|665aa|down_9|NZ_CP040505.1_85453_87448_-	cd13544, PBP2_Fbp_like_1, Substrate binding domain of a putative ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	4	84051-84132	4	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CCCATTCCCTGAGTGTCAGAGAG	23	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|133aa|up_9|NZ_CP040505.1_65755_66154_-,NA	NA|133aa|up_9|NZ_CP040505.1_65755_66154_-	NA	NA|557aa|up_8|NZ_CP040505.1_66517_68188_-	PRK07564, PRK07564, phosphoglucomutase; Validated	NA|447aa|up_7|NZ_CP040505.1_68758_70099_+	pfam07221, GlcNAc_2-epim, N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	NA|389aa|up_6|NZ_CP040505.1_70921_72088_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|199aa|up_5|NZ_CP040505.1_72985_73582_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|267aa|up_4|NZ_CP040505.1_77567_78368_-	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|316aa|up_3|NZ_CP040505.1_78367_79315_-	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|332aa|up_2|NZ_CP040505.1_79885_80881_-	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|439aa|up_1|NZ_CP040505.1_81240_82557_+	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|350aa|up_0|NZ_CP040505.1_82754_83804_+	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|470aa|down_0|NZ_CP040505.1_84168_85578_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|665aa|down_1|NZ_CP040505.1_85453_87448_-	cd13544, PBP2_Fbp_like_1, Substrate binding domain of a putative ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|157aa|down_2|NZ_CP040505.1_87486_87957_-	cd13544, PBP2_Fbp_like_1, Substrate binding domain of a putative ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|238aa|down_3|NZ_CP040505.1_89771_90485_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|262aa|down_4|NZ_CP040505.1_90481_91267_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|121aa|down_5|NZ_CP040505.1_91424_91787_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|231aa|down_6|NZ_CP040505.1_92122_92815_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|146aa|down_7|NZ_CP040505.1_93013_93451_-	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi)	NA|354aa|down_8|NZ_CP040505.1_94939_96001_+	COG0845, AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane]	NA|241aa|down_9|NZ_CP040505.1_96002_96725_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	5	98332-98592	5	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GAGACTTCCGGATGCGAGCGGACGTGAG	28	0	0	NA	NA	NA	4	4	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|354aa|down_2|NZ_CP040505.1_101576_102638_+	NA|665aa|up_9|NZ_CP040505.1_85453_87448_-	cd13544, PBP2_Fbp_like_1, Substrate binding domain of a putative ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|157aa|up_8|NZ_CP040505.1_87486_87957_-	cd13544, PBP2_Fbp_like_1, Substrate binding domain of a putative ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|238aa|up_7|NZ_CP040505.1_89771_90485_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|262aa|up_6|NZ_CP040505.1_90481_91267_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|121aa|up_5|NZ_CP040505.1_91424_91787_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|231aa|up_4|NZ_CP040505.1_92122_92815_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|146aa|up_3|NZ_CP040505.1_93013_93451_-	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi)	NA|354aa|up_2|NZ_CP040505.1_94939_96001_+	COG0845, AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane]	NA|241aa|up_1|NZ_CP040505.1_96002_96725_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|480aa|up_0|NZ_CP040505.1_96721_98161_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|304aa|down_0|NZ_CP040505.1_98908_99820_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|194aa|down_1|NZ_CP040505.1_100411_100993_+	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|354aa|down_2|NZ_CP040505.1_101576_102638_+	NA	NA|350aa|down_3|NZ_CP040505.1_103118_104168_+	pfam03595, SLAC1, Voltage-dependent anion channel	NA|911aa|down_4|NZ_CP040505.1_104401_107134_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|524aa|down_5|NZ_CP040505.1_110578_112150_+	PRK07847, PRK07847, amidophosphoribosyltransferase; Provisional	NA|382aa|down_6|NZ_CP040505.1_112462_113608_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|85aa|down_7|NZ_CP040505.1_114804_115059_-	pfam11273, DUF3073, Protein of unknown function (DUF3073)	NA|101aa|down_8|NZ_CP040505.1_115257_115560_-	pfam12277, DUF3618, Protein of unknown function (DUF3618)	NA|152aa|down_9|NZ_CP040505.1_115556_116012_-	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	6	165831-165936	6	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CGCAAGCTGGTCTGATCGCATCGCAGACGGG	31	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|318aa|up_9|NZ_CP040505.1_155267_156221_-,NA|90aa|up_8|NZ_CP040505.1_156250_156520_-,NA|375aa|up_5|NZ_CP040505.1_157443_158568_+,NA|244aa|down_0|NZ_CP040505.1_166120_166852_+,NA|311aa|down_3|NZ_CP040505.1_168439_169372_-	NA|318aa|up_9|NZ_CP040505.1_155267_156221_-	NA	NA|90aa|up_8|NZ_CP040505.1_156250_156520_-	NA	NA|122aa|up_7|NZ_CP040505.1_156542_156908_+	pfam17844, SCP_3, Bacterial SCP ortholog	NA|88aa|up_6|NZ_CP040505.1_157017_157281_-	pfam14019, DUF4235, Protein of unknown function (DUF4235)	NA|375aa|up_5|NZ_CP040505.1_157443_158568_+	NA	NA|440aa|up_4|NZ_CP040505.1_158602_159922_-	pfam16268, DUF4921, Domain of unknown function (DUF4921)	NA|137aa|up_3|NZ_CP040505.1_160103_160514_-	COG3602, COG3602, Uncharacterized protein conserved in bacteria [Function unknown]	NA|282aa|up_2|NZ_CP040505.1_160633_161479_-	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|388aa|up_1|NZ_CP040505.1_161775_162939_-	cd03254, ABCC_Glucan_exporter_like, ATP-binding cassette domain of glucan transporter and related proteins, subfamily C	NA|580aa|up_0|NZ_CP040505.1_163934_165674_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|244aa|down_0|NZ_CP040505.1_166120_166852_+	NA	NA|191aa|down_1|NZ_CP040505.1_166903_167476_+	pfam03551, PadR, Transcriptional regulator PadR-like family	NA|170aa|down_2|NZ_CP040505.1_167903_168413_-	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|311aa|down_3|NZ_CP040505.1_168439_169372_-	NA	NA|523aa|down_4|NZ_CP040505.1_169637_171206_+	COG2985, COG2985, Predicted permease [General function prediction only]	NA|180aa|down_5|NZ_CP040505.1_172030_172570_+	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|433aa|down_6|NZ_CP040505.1_172887_174186_-	PRK02813, PRK02813, putative aminopeptidase 2; Provisional	NA|578aa|down_7|NZ_CP040505.1_174281_176015_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|589aa|down_8|NZ_CP040505.1_176011_177778_-	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|347aa|down_9|NZ_CP040505.1_177801_178842_-	COG0614, FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	7	169416-169503	7	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	AGCGGCCCTCGGGCTCGCGCAGAAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|375aa|up_9|NZ_CP040505.1_157443_158568_+,NA|244aa|up_3|NZ_CP040505.1_166120_166852_+,NA|311aa|up_0|NZ_CP040505.1_168439_169372_-,NA	NA|375aa|up_9|NZ_CP040505.1_157443_158568_+	NA	NA|440aa|up_8|NZ_CP040505.1_158602_159922_-	pfam16268, DUF4921, Domain of unknown function (DUF4921)	NA|137aa|up_7|NZ_CP040505.1_160103_160514_-	COG3602, COG3602, Uncharacterized protein conserved in bacteria [Function unknown]	NA|282aa|up_6|NZ_CP040505.1_160633_161479_-	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|388aa|up_5|NZ_CP040505.1_161775_162939_-	cd03254, ABCC_Glucan_exporter_like, ATP-binding cassette domain of glucan transporter and related proteins, subfamily C	NA|580aa|up_4|NZ_CP040505.1_163934_165674_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|244aa|up_3|NZ_CP040505.1_166120_166852_+	NA	NA|191aa|up_2|NZ_CP040505.1_166903_167476_+	pfam03551, PadR, Transcriptional regulator PadR-like family	NA|170aa|up_1|NZ_CP040505.1_167903_168413_-	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|311aa|up_0|NZ_CP040505.1_168439_169372_-	NA	NA|523aa|down_0|NZ_CP040505.1_169637_171206_+	COG2985, COG2985, Predicted permease [General function prediction only]	NA|180aa|down_1|NZ_CP040505.1_172030_172570_+	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|433aa|down_2|NZ_CP040505.1_172887_174186_-	PRK02813, PRK02813, putative aminopeptidase 2; Provisional	NA|578aa|down_3|NZ_CP040505.1_174281_176015_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|589aa|down_4|NZ_CP040505.1_176011_177778_-	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|347aa|down_5|NZ_CP040505.1_177801_178842_-	COG0614, FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|260aa|down_6|NZ_CP040505.1_178854_179634_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|395aa|down_7|NZ_CP040505.1_179630_180815_-	pfam01032, FecCD, FecCD transport family	NA|705aa|down_8|NZ_CP040505.1_180735_182850_-	TIGR03604, hypothetical_protein, thiazole/oxazole-forming peptide maturase, SagD family component	NA|150aa|down_9|NZ_CP040505.1_183306_183756_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	8	213916-213994	8	CRISPRCasFinder	no	cas1,cas2	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	GCAGCGCCAACTACTACCGCAGCAT	25	0	0	NA	NA	NA	1	1	Unclear	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|288aa|up_5|NZ_CP040505.1_205904_206768_+,NA	NA|345aa|up_9|NZ_CP040505.1_201336_202371_+	PRK14277, PRK14277, chaperone protein DnaJ; Provisional	NA|182aa|up_8|NZ_CP040505.1_202374_202920_+	cd04766, HTH_HspR, Helix-Turn-Helix DNA binding domain of the HspR transcription regulator	NA|408aa|up_7|NZ_CP040505.1_203576_204800_+	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|246aa|up_6|NZ_CP040505.1_204799_205537_+	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|288aa|up_5|NZ_CP040505.1_205904_206768_+	NA	NA|156aa|up_4|NZ_CP040505.1_206867_207335_+	pfam10722, YbjN, Putative bacterial sensory transduction regulator	NA|235aa|up_3|NZ_CP040505.1_207334_208039_+	pfam10722, YbjN, Putative bacterial sensory transduction regulator	NA|888aa|up_2|NZ_CP040505.1_208338_211002_+	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|272aa|up_1|NZ_CP040505.1_211548_212364_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|266aa|up_0|NZ_CP040505.1_212701_213499_-	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|711aa|down_0|NZ_CP040505.1_214094_216227_-	pfam10101, DUF2339, Predicted membrane protein (DUF2339)	NA|372aa|down_1|NZ_CP040505.1_218053_219169_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|414aa|down_2|NZ_CP040505.1_219830_221072_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|190aa|down_3|NZ_CP040505.1_221216_221786_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|275aa|down_4|NZ_CP040505.1_221932_222757_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|167aa|down_5|NZ_CP040505.1_223577_224078_-	pfam03703, bPH_2, Bacterial PH domain	NA|217aa|down_6|NZ_CP040505.1_224136_224787_+	cd18096, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|343aa|down_7|NZ_CP040505.1_224930_225959_+	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional	cas1|672aa|down_8|NZ_CP040505.1_230322_232338_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|94aa|down_9|NZ_CP040505.1_232334_232616_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	9	226208-230030	9,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas2,csm3gr7,cas10,cas6	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Type III-D,Type III-A,Type III-C,Type III-B	GTCTTAATGCACCTTATGGCGCGAGGTGCTTTCTGAC,GTCTTAATGCACCTTATGGCGCGAGGTGCTTTCTGAC,GTCTTAATGCACCTTATGGCGCGAGGTGCTTTCTGAC	37,37,37	0	0	NA	NA	NA:NA:NA	52,52,52	52	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|173aa|down_3|NZ_CP040505.1_234798_235317_-,NA|748aa|down_7|NZ_CP040505.1_240418_242662_+,NA|151aa|down_8|NZ_CP040505.1_242654_243107_+	NA|272aa|up_9|NZ_CP040505.1_211548_212364_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|266aa|up_8|NZ_CP040505.1_212701_213499_-	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|711aa|up_7|NZ_CP040505.1_214094_216227_-	pfam10101, DUF2339, Predicted membrane protein (DUF2339)	NA|372aa|up_6|NZ_CP040505.1_218053_219169_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|414aa|up_5|NZ_CP040505.1_219830_221072_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|190aa|up_4|NZ_CP040505.1_221216_221786_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|275aa|up_3|NZ_CP040505.1_221932_222757_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|167aa|up_2|NZ_CP040505.1_223577_224078_-	pfam03703, bPH_2, Bacterial PH domain	NA|217aa|up_1|NZ_CP040505.1_224136_224787_+	cd18096, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|343aa|up_0|NZ_CP040505.1_224930_225959_+	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional	cas1|672aa|down_0|NZ_CP040505.1_230322_232338_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|94aa|down_1|NZ_CP040505.1_232334_232616_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	csm3gr7|715aa|down_2|NZ_CP040505.1_232652_234797_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	NA|173aa|down_3|NZ_CP040505.1_234798_235317_-	NA	csm3gr7|501aa|down_4|NZ_CP040505.1_235313_236816_-	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|597aa|down_5|NZ_CP040505.1_236818_238609_-	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	cas10|551aa|down_6|NZ_CP040505.1_238605_240258_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	NA|748aa|down_7|NZ_CP040505.1_240418_242662_+	NA	NA|151aa|down_8|NZ_CP040505.1_242654_243107_+	NA	NA|546aa|down_9|NZ_CP040505.1_243162_244800_+	TIGR02112, Protein_ybgE
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	10	256278-256362	10	CRISPRCasFinder	no	csm3gr7,cas10,cas6	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Type III-D,Type III-A,Type III-C,Type III-B	GGTTTTCCCCGTGGCTTGTGCGGG	24	0	0	NA	NA	NA	1	1	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	cas6|275aa|up_8|NZ_CP040505.1_244819_245644_-,NA|394aa|up_7|NZ_CP040505.1_245874_247056_+,NA|274aa|down_0|NZ_CP040505.1_258862_259684_+	NA|546aa|up_9|NZ_CP040505.1_243162_244800_+	TIGR02112, Protein_ybgE	cas6|275aa|up_8|NZ_CP040505.1_244819_245644_-	NA	NA|394aa|up_7|NZ_CP040505.1_245874_247056_+	NA	NA|168aa|up_6|NZ_CP040505.1_247308_247812_+	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA|342aa|up_5|NZ_CP040505.1_247914_248940_+	PRK13965, PRK13965, ribonucleotide-diphosphate reductase subunit beta; Provisional	NA|236aa|up_4|NZ_CP040505.1_249086_249794_+	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription]	NA|613aa|up_3|NZ_CP040505.1_250115_251954_-	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP)	NA|251aa|up_2|NZ_CP040505.1_252452_253205_-	cd08562, GDPD_EcUgpQ_like, Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins	NA|421aa|up_1|NZ_CP040505.1_253240_254503_-	pfam13224, DUF4032, Domain of unknown function (DUF4032)	NA|376aa|up_0|NZ_CP040505.1_254943_256071_-	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|274aa|down_0|NZ_CP040505.1_258862_259684_+	NA	NA|198aa|down_1|NZ_CP040505.1_260748_261342_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|463aa|down_2|NZ_CP040505.1_261647_263036_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|233aa|down_3|NZ_CP040505.1_263498_264197_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|200aa|down_4|NZ_CP040505.1_264580_265180_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|542aa|down_5|NZ_CP040505.1_266150_267776_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|97aa|down_6|NZ_CP040505.1_268184_268475_-	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|319aa|down_7|NZ_CP040505.1_268649_269606_-	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown]	NA|551aa|down_8|NZ_CP040505.1_269686_271339_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|237aa|down_9|NZ_CP040505.1_271446_272157_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	11	262155-262352	2	CRT	no	cas6	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	GTTGAGGTAGTACCAGGT	18	0	0	NA	NA	NA	3	3	Unclear	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|394aa|up_9|NZ_CP040505.1_245874_247056_+,NA|274aa|up_1|NZ_CP040505.1_258862_259684_+,NA	NA|394aa|up_9|NZ_CP040505.1_245874_247056_+	NA	NA|168aa|up_8|NZ_CP040505.1_247308_247812_+	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA|342aa|up_7|NZ_CP040505.1_247914_248940_+	PRK13965, PRK13965, ribonucleotide-diphosphate reductase subunit beta; Provisional	NA|236aa|up_6|NZ_CP040505.1_249086_249794_+	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription]	NA|613aa|up_5|NZ_CP040505.1_250115_251954_-	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP)	NA|251aa|up_4|NZ_CP040505.1_252452_253205_-	cd08562, GDPD_EcUgpQ_like, Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins	NA|421aa|up_3|NZ_CP040505.1_253240_254503_-	pfam13224, DUF4032, Domain of unknown function (DUF4032)	NA|376aa|up_2|NZ_CP040505.1_254943_256071_-	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|274aa|up_1|NZ_CP040505.1_258862_259684_+	NA	NA|198aa|up_0|NZ_CP040505.1_260748_261342_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|233aa|down_0|NZ_CP040505.1_263498_264197_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|200aa|down_1|NZ_CP040505.1_264580_265180_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|542aa|down_2|NZ_CP040505.1_266150_267776_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|97aa|down_3|NZ_CP040505.1_268184_268475_-	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|319aa|down_4|NZ_CP040505.1_268649_269606_-	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown]	NA|551aa|down_5|NZ_CP040505.1_269686_271339_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|237aa|down_6|NZ_CP040505.1_271446_272157_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|161aa|down_7|NZ_CP040505.1_272340_272823_+	COG3402, COG3402, Uncharacterized conserved protein [Function unknown]	NA|701aa|down_8|NZ_CP040505.1_272819_274922_+	COG3428, COG3428, Predicted membrane protein [Function unknown]	NA|291aa|down_9|NZ_CP040505.1_274918_275791_+	COG5495, COG5495, Uncharacterized conserved protein [Function unknown]
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	12	267847-268178	2,3,11	PILER-CR,CRT,CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GGGCGGCCCCCGCGCCTGCATGAGCCTTTGGGG,GGGCGNNCCCCGCGCCTGCA,GGGCGCTCCCCGCGCCTGCAGCGAAGGC	33,20,28	0	0	NA	NA	NA:NA:NA	2,4,2	4	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|274aa|up_5|NZ_CP040505.1_258862_259684_+,NA|64aa|down_9|NZ_CP040505.1_277434_277626_+	NA|613aa|up_9|NZ_CP040505.1_250115_251954_-	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP)	NA|251aa|up_8|NZ_CP040505.1_252452_253205_-	cd08562, GDPD_EcUgpQ_like, Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins	NA|421aa|up_7|NZ_CP040505.1_253240_254503_-	pfam13224, DUF4032, Domain of unknown function (DUF4032)	NA|376aa|up_6|NZ_CP040505.1_254943_256071_-	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|274aa|up_5|NZ_CP040505.1_258862_259684_+	NA	NA|198aa|up_4|NZ_CP040505.1_260748_261342_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|463aa|up_3|NZ_CP040505.1_261647_263036_-	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|233aa|up_2|NZ_CP040505.1_263498_264197_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|200aa|up_1|NZ_CP040505.1_264580_265180_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|542aa|up_0|NZ_CP040505.1_266150_267776_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|97aa|down_0|NZ_CP040505.1_268184_268475_-	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|319aa|down_1|NZ_CP040505.1_268649_269606_-	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown]	NA|551aa|down_2|NZ_CP040505.1_269686_271339_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|237aa|down_3|NZ_CP040505.1_271446_272157_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|161aa|down_4|NZ_CP040505.1_272340_272823_+	COG3402, COG3402, Uncharacterized conserved protein [Function unknown]	NA|701aa|down_5|NZ_CP040505.1_272819_274922_+	COG3428, COG3428, Predicted membrane protein [Function unknown]	NA|291aa|down_6|NZ_CP040505.1_274918_275791_+	COG5495, COG5495, Uncharacterized conserved protein [Function unknown]	NA|306aa|down_7|NZ_CP040505.1_275885_276803_+	pfam02569, Pantoate_ligase, Pantoate-beta-alanine ligase	NA|145aa|down_8|NZ_CP040505.1_276813_277248_+	pfam02261, Asp_decarbox, Aspartate decarboxylase	NA|64aa|down_9|NZ_CP040505.1_277434_277626_+	NA
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	13	284999-285099	12	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	AGACGTTGACGTACACGAGACCTGTTGAGAACACTCC	37	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|64aa|up_4|NZ_CP040505.1_277434_277626_+,NA|78aa|up_2|NZ_CP040505.1_279117_279351_+,NA	NA|161aa|up_9|NZ_CP040505.1_272340_272823_+	COG3402, COG3402, Uncharacterized conserved protein [Function unknown]	NA|701aa|up_8|NZ_CP040505.1_272819_274922_+	COG3428, COG3428, Predicted membrane protein [Function unknown]	NA|291aa|up_7|NZ_CP040505.1_274918_275791_+	COG5495, COG5495, Uncharacterized conserved protein [Function unknown]	NA|306aa|up_6|NZ_CP040505.1_275885_276803_+	pfam02569, Pantoate_ligase, Pantoate-beta-alanine ligase	NA|145aa|up_5|NZ_CP040505.1_276813_277248_+	pfam02261, Asp_decarbox, Aspartate decarboxylase	NA|64aa|up_4|NZ_CP040505.1_277434_277626_+	NA	NA|239aa|up_3|NZ_CP040505.1_278347_279064_+	pfam06114, Peptidase_M78, IrrE N-terminal-like domain	NA|78aa|up_2|NZ_CP040505.1_279117_279351_+	NA	NA|530aa|up_1|NZ_CP040505.1_282418_284008_+	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|237aa|up_0|NZ_CP040505.1_284143_284854_+	PRK13756, PRK13756, TetR family transcriptional regulator	NA|220aa|down_0|NZ_CP040505.1_285283_285943_-	COG1556, COG1556, Uncharacterized conserved protein [Function unknown]	NA|520aa|down_1|NZ_CP040505.1_285939_287499_-	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]	NA|263aa|down_2|NZ_CP040505.1_287500_288289_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|194aa|down_3|NZ_CP040505.1_288966_289548_-	PRK07922, PRK07922, amino-acid N-acetyltransferase	NA|315aa|down_4|NZ_CP040505.1_289544_290489_-	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|267aa|down_5|NZ_CP040505.1_290919_291720_+	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]	NA|509aa|down_6|NZ_CP040505.1_291915_293442_+	PRK00047, glpK, glycerol kinase GlpK	NA|190aa|down_7|NZ_CP040505.1_293533_294103_+	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins	NA|126aa|down_8|NZ_CP040505.1_294447_294825_+	cd04458, CSP_CDS, Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea	NA|265aa|down_9|NZ_CP040505.1_294817_295612_+	pfam11228, DUF3027, Protein of unknown function (DUF3027)
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	14	314256-314467	13	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CTCGTCCCCGCCGGCGCGCGTGGGTTCC	28	0	0	NA	NA	NA	3	3	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|347aa|up_5|NZ_CP040505.1_304641_305682_-,NA|165aa|up_4|NZ_CP040505.1_306008_306503_-,NA|139aa|up_2|NZ_CP040505.1_307830_308247_-,NA|108aa|up_1|NZ_CP040505.1_308827_309151_-,NA|52aa|up_0|NZ_CP040505.1_313944_314100_+,NA|298aa|down_6|NZ_CP040505.1_320462_321356_+,NA|109aa|down_7|NZ_CP040505.1_323797_324124_-	NA|310aa|up_9|NZ_CP040505.1_300693_301623_+	pfam00582, Usp, Universal stress protein family	NA|372aa|up_8|NZ_CP040505.1_302245_303361_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|366aa|up_7|NZ_CP040505.1_303382_304480_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|62aa|up_6|NZ_CP040505.1_304466_304652_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|347aa|up_5|NZ_CP040505.1_304641_305682_-	NA	NA|165aa|up_4|NZ_CP040505.1_306008_306503_-	NA	NA|411aa|up_3|NZ_CP040505.1_306499_307732_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|139aa|up_2|NZ_CP040505.1_307830_308247_-	NA	NA|108aa|up_1|NZ_CP040505.1_308827_309151_-	NA	NA|52aa|up_0|NZ_CP040505.1_313944_314100_+	NA	NA|129aa|down_0|NZ_CP040505.1_314642_315029_-	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|207aa|down_1|NZ_CP040505.1_315055_315676_-	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB	NA|170aa|down_2|NZ_CP040505.1_315850_316360_-	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|310aa|down_3|NZ_CP040505.1_316563_317493_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|410aa|down_4|NZ_CP040505.1_317489_318719_+	cd00887, MoeA, MoeA family	NA|263aa|down_5|NZ_CP040505.1_318968_319757_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|298aa|down_6|NZ_CP040505.1_320462_321356_+	NA	NA|109aa|down_7|NZ_CP040505.1_323797_324124_-	NA	NA|312aa|down_8|NZ_CP040505.1_324205_325141_-	pfam13814, Replic_Relax, Replication-relaxation	NA|712aa|down_9|NZ_CP040505.1_325140_327276_-	COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion]
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	15	372309-372402	14	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GGTGTTCCGCCTGAACGTACCTCCGATTCTGCT	33	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|855aa|up_9|NZ_CP040505.1_345531_348096_+	cd04847, Peptidases_S8_Subtilisin_like_2, Peptidase S8 family domain in Subtilisin-like proteins	NA|239aa|up_8|NZ_CP040505.1_348562_349279_+	cd06561, AlkD_like, A new structural DNA glycosylase	NA|1159aa|up_7|NZ_CP040505.1_350578_354055_+	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|1300aa|up_6|NZ_CP040505.1_354069_357969_+	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|375aa|up_5|NZ_CP040505.1_360744_361869_-	pfam18741, MTES_1575, REase_MTES_1575	NA|125aa|up_4|NZ_CP040505.1_364650_365025_+	PRK05163, rpsL, 30S ribosomal protein S12; Validated	NA|157aa|up_3|NZ_CP040505.1_365024_365495_+	PRK05302, PRK05302, 30S ribosomal protein S7; Validated	NA|708aa|up_2|NZ_CP040505.1_365588_367712_+	PRK00007, PRK00007, elongation factor G; Reviewed	NA|396aa|up_1|NZ_CP040505.1_367868_369056_+	PRK00049, PRK00049, elongation factor Tu; Reviewed	NA|856aa|up_0|NZ_CP040505.1_369452_372020_+	pfam17802, SpaA, Prealbumin-like fold domain	NA|325aa|down_0|NZ_CP040505.1_372949_373924_+	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|517aa|down_1|NZ_CP040505.1_374087_375638_+	pfam16555, GramPos_pilinD1, Gram-positive pilin subunit D1, N-terminal	NA|103aa|down_2|NZ_CP040505.1_376639_376948_+	PRK00596, rpsJ, 30S ribosomal protein S10; Reviewed	NA|223aa|down_3|NZ_CP040505.1_376959_377628_+	PRK00001, rplC, 50S ribosomal protein L3; Validated	NA|215aa|down_4|NZ_CP040505.1_377629_378274_+	PRK05319, rplD, 50S ribosomal protein L4; Provisional	NA|102aa|down_5|NZ_CP040505.1_378270_378576_+	PRK05738, rplW, 50S ribosomal protein L23; Reviewed	NA|279aa|down_6|NZ_CP040505.1_378599_379436_+	PRK09374, rplB, 50S ribosomal protein L2; Validated	NA|94aa|down_7|NZ_CP040505.1_379452_379734_+	PRK00357, rpsS, 30S ribosomal protein S19; Reviewed	NA|124aa|down_8|NZ_CP040505.1_379763_380135_+	PRK00565, rplV, 50S ribosomal protein L22; Reviewed	NA|266aa|down_9|NZ_CP040505.1_380136_380934_+	PRK00310, rpsC, 30S ribosomal protein S3; Reviewed
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	16	399935-400020	15	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	TCGTTATCCCCTCCATTTGTGAA	23	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|166aa|down_2|NZ_CP040505.1_403238_403736_-,NA|174aa|down_7|NZ_CP040505.1_410098_410620_+,NA|187aa|down_8|NZ_CP040505.1_410600_411161_+	NA|38aa|up_9|NZ_CP040505.1_392046_392160_+	PRK00465, rpmJ, 50S ribosomal protein L36; Reviewed	NA|125aa|up_8|NZ_CP040505.1_392307_392682_+	PRK05179, rpsM, 30S ribosomal protein S13; Validated	NA|137aa|up_7|NZ_CP040505.1_392750_393161_+	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|333aa|up_6|NZ_CP040505.1_393312_394311_+	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|164aa|up_5|NZ_CP040505.1_394357_394849_+	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|250aa|up_4|NZ_CP040505.1_395281_396031_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|311aa|up_3|NZ_CP040505.1_396018_396951_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|148aa|up_2|NZ_CP040505.1_397208_397652_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|164aa|up_1|NZ_CP040505.1_397696_398188_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|454aa|up_0|NZ_CP040505.1_398341_399703_+	PRK14318, glmM, phosphoglucosamine mutase; Provisional	NA|318aa|down_0|NZ_CP040505.1_400058_401012_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|719aa|down_1|NZ_CP040505.1_401046_403203_-	cd01823, SEST_like, SEST_like	NA|166aa|down_2|NZ_CP040505.1_403238_403736_-	NA	NA|638aa|down_3|NZ_CP040505.1_403913_405827_+	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|298aa|down_4|NZ_CP040505.1_406006_406900_+	COG4975, GlcU, Putative glucose uptake permease [Carbohydrate transport and metabolism]	NA|533aa|down_5|NZ_CP040505.1_407003_408602_+	cd01171, YXKO-related, B	NA|412aa|down_6|NZ_CP040505.1_408610_409846_+	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|174aa|down_7|NZ_CP040505.1_410098_410620_+	NA	NA|187aa|down_8|NZ_CP040505.1_410600_411161_+	NA	NA|260aa|down_9|NZ_CP040505.1_411166_411946_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	17	431602-431685	16	CRISPRCasFinder	no	DEDDh	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	TCCCGGGGCGTGGGGACGTGGCT	23	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|88aa|up_1|NZ_CP040505.1_430161_430425_+,NA	NA|168aa|up_9|NZ_CP040505.1_422303_422807_+	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|480aa|up_8|NZ_CP040505.1_422779_424219_+	cd00366, FGGY, FGGY family of carbohydrate kinases	NA|208aa|up_7|NZ_CP040505.1_424333_424957_+	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE	NA|232aa|up_6|NZ_CP040505.1_424967_425663_+	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|175aa|up_5|NZ_CP040505.1_425659_426184_+	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|234aa|up_4|NZ_CP040505.1_426420_427122_+	cd03498, SQR_TypeB_2_TM, Succinate:quinone oxidoreductase (SQR)-like Type B subfamily 2, transmembrane subunit; composed of proteins with similarity to the SQRs of Geobacter metallireducens and Corynebacterium glutamicum	NA|660aa|up_3|NZ_CP040505.1_427138_429118_+	PRK07573, sdhA, fumarate reductase/succinate dehydrogenase flavoprotein subunit	NA|248aa|up_2|NZ_CP040505.1_429114_429858_+	PRK07570, PRK07570, succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated	NA|88aa|up_1|NZ_CP040505.1_430161_430425_+	NA	NA|351aa|up_0|NZ_CP040505.1_430453_431506_+	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|507aa|down_0|NZ_CP040505.1_431882_433403_-	pfam18096, Thump_like, THUMP domain-like	NA|99aa|down_1|NZ_CP040505.1_433636_433933_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|259aa|down_2|NZ_CP040505.1_434157_434934_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|273aa|down_3|NZ_CP040505.1_434999_435818_-	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti	NA|97aa|down_4|NZ_CP040505.1_435920_436211_-	pfam02467, Whib, Transcription factor WhiB	NA|308aa|down_5|NZ_CP040505.1_436562_437486_+	cd01104, HTH_MlrA-CarA, Helix-Turn-Helix DNA binding domain of the transcription regulators MlrA and CarA	NA|428aa|down_6|NZ_CP040505.1_437817_439101_+	pfam07221, GlcNAc_2-epim, N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	NA|508aa|down_7|NZ_CP040505.1_439240_440764_+	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain	NA|230aa|down_8|NZ_CP040505.1_440985_441675_+	cd00956, Transaldolase_FSA, Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea	DEDDh|243aa|down_9|NZ_CP040505.1_441679_442408_-	PRK07942, PRK07942, DNA polymerase III subunit epsilon; Provisional
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	18	512072-512207	17	CRISPRCasFinder	no	cas3	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	TGCTTGGCGCGCCGATTGGGACGCCT	26	0	0	NA	NA	NA	2	2	Unclear	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|196aa|up_6|NZ_CP040505.1_503474_504062_+,NA	NA|304aa|up_9|NZ_CP040505.1_498085_498997_+	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases	NA|206aa|up_8|NZ_CP040505.1_498993_499611_+	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	cas3|1197aa|up_7|NZ_CP040505.1_499607_503198_+	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]	NA|196aa|up_6|NZ_CP040505.1_503474_504062_+	NA	NA|431aa|up_5|NZ_CP040505.1_504309_505602_+	PRK00077, eno, enolase; Provisional	NA|236aa|up_4|NZ_CP040505.1_506087_506795_+	pfam04977, DivIC, Septum formation initiator	NA|172aa|up_3|NZ_CP040505.1_506791_507307_+	pfam04417, DUF501, Protein of unknown function (DUF501)	NA|323aa|up_2|NZ_CP040505.1_507706_508675_+	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|389aa|up_1|NZ_CP040505.1_508949_510116_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|441aa|up_0|NZ_CP040505.1_510513_511836_+	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1	NA|320aa|down_0|NZ_CP040505.1_512482_513442_+	pfam12811, BaxI_1, Bax inhibitor 1 like	NA|132aa|down_1|NZ_CP040505.1_513488_513884_+	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|203aa|down_2|NZ_CP040505.1_514319_514928_-	PRK00058, PRK00058, peptide-methionine (S)-S-oxide reductase MsrA	NA|403aa|down_3|NZ_CP040505.1_515036_516245_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|474aa|down_4|NZ_CP040505.1_516949_518371_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|160aa|down_5|NZ_CP040505.1_519498_519978_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|227aa|down_6|NZ_CP040505.1_520143_520824_-	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only]	NA|253aa|down_7|NZ_CP040505.1_521094_521853_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|312aa|down_8|NZ_CP040505.1_522406_523342_-	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate	NA|92aa|down_9|NZ_CP040505.1_523386_523662_-	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	19	618073-618149	18	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GAGTTTGTACGCCGGGGCCCGCGTG	25	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|467aa|up_8|NZ_CP040505.1_607398_608799_+,NA|158aa|down_1|NZ_CP040505.1_622004_622478_-,NA|189aa|down_3|NZ_CP040505.1_623607_624174_+,NA|209aa|down_5|NZ_CP040505.1_624964_625591_+,NA|155aa|down_7|NZ_CP040505.1_627163_627628_+	NA|1059aa|up_9|NZ_CP040505.1_604225_607402_+	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|467aa|up_8|NZ_CP040505.1_607398_608799_+	NA	NA|139aa|up_7|NZ_CP040505.1_609037_609454_-	cd12954, MMP_TTHA0227_like_1, Minimal MMP-like domain found in a group of hypothetical proteins from alphaproteobacteria and actinobacteria	NA|151aa|up_6|NZ_CP040505.1_609681_610134_+	pfam12005, DUF3499, Protein of unknown function (DUF3499)	NA|382aa|up_5|NZ_CP040505.1_610688_611834_-	pfam10110, GPDPase_memb, Membrane domain of glycerophosphoryl diester phosphodiesterase	NA|227aa|up_4|NZ_CP040505.1_611981_612662_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|519aa|up_3|NZ_CP040505.1_612891_614448_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|558aa|up_2|NZ_CP040505.1_614447_616121_+	PRK13614, PRK13614, lipoprotein LpqB; Provisional	NA|281aa|up_1|NZ_CP040505.1_616361_617204_+	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|215aa|up_0|NZ_CP040505.1_617383_618028_+	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY,  is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site	NA|960aa|down_0|NZ_CP040505.1_619077_621957_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|158aa|down_1|NZ_CP040505.1_622004_622478_-	NA	NA|234aa|down_2|NZ_CP040505.1_622474_623176_-	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan	NA|189aa|down_3|NZ_CP040505.1_623607_624174_+	NA	NA|70aa|down_4|NZ_CP040505.1_624604_624814_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|209aa|down_5|NZ_CP040505.1_624964_625591_+	NA	NA|524aa|down_6|NZ_CP040505.1_625587_627159_+	cd03111, CpaE-like, pilus assembly ATPase CpaE	NA|155aa|down_7|NZ_CP040505.1_627163_627628_+	NA	NA|1052aa|down_8|NZ_CP040505.1_627932_631088_-	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|403aa|down_9|NZ_CP040505.1_631084_632293_-	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	20	633723-633822	19	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	AAGCCCCGAGAAGTGAACGACCCAAACCTTAGGACG	36	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|158aa|up_9|NZ_CP040505.1_622004_622478_-,NA|189aa|up_7|NZ_CP040505.1_623607_624174_+,NA|209aa|up_5|NZ_CP040505.1_624964_625591_+,NA|155aa|up_3|NZ_CP040505.1_627163_627628_+,NA|172aa|down_2|NZ_CP040505.1_636339_636855_-,NA|120aa|down_4|NZ_CP040505.1_637791_638151_+,NA|25aa|down_5|NZ_CP040505.1_638283_638358_+	NA|158aa|up_9|NZ_CP040505.1_622004_622478_-	NA	NA|234aa|up_8|NZ_CP040505.1_622474_623176_-	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan	NA|189aa|up_7|NZ_CP040505.1_623607_624174_+	NA	NA|70aa|up_6|NZ_CP040505.1_624604_624814_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|209aa|up_5|NZ_CP040505.1_624964_625591_+	NA	NA|524aa|up_4|NZ_CP040505.1_625587_627159_+	cd03111, CpaE-like, pilus assembly ATPase CpaE	NA|155aa|up_3|NZ_CP040505.1_627163_627628_+	NA	NA|1052aa|up_2|NZ_CP040505.1_627932_631088_-	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|403aa|up_1|NZ_CP040505.1_631084_632293_-	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]	NA|273aa|up_0|NZ_CP040505.1_632670_633489_-	TIGR02067, his_9_HisN, histidinol-phosphatase, inositol monophosphatase family	NA|352aa|down_0|NZ_CP040505.1_633843_634899_-	cd01854, YjeQ_EngC, Ribosomal interacting GTPase YjeQ/EngC, a circularly permuted subfamily of the Ras GTPases	NA|429aa|down_1|NZ_CP040505.1_634895_636182_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|172aa|down_2|NZ_CP040505.1_636339_636855_-	NA	NA|217aa|down_3|NZ_CP040505.1_637148_637799_+	TIGR02947, putative_RNA_polymerase_sigma_factor, RNA polymerase sigma-70 factor, TIGR02947 family	NA|120aa|down_4|NZ_CP040505.1_637791_638151_+	NA	NA|25aa|down_5|NZ_CP040505.1_638283_638358_+	NA	NA|231aa|down_6|NZ_CP040505.1_638589_639282_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|453aa|down_7|NZ_CP040505.1_639278_640637_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|200aa|down_8|NZ_CP040505.1_641038_641638_-	cd01835, SGNH_hydrolase_like_3, SGNH_hydrolase subfamily	NA|1276aa|down_9|NZ_CP040505.1_641654_645482_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	21	653045-653136	20	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	AGTAGCGAGGGGCAATGGTGAGCTGAGGATT	31	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|25aa|up_9|NZ_CP040505.1_638283_638358_+,NA|221aa|down_1|NZ_CP040505.1_654185_654848_-,NA|271aa|down_8|NZ_CP040505.1_663010_663823_-	NA|25aa|up_9|NZ_CP040505.1_638283_638358_+	NA	NA|231aa|up_8|NZ_CP040505.1_638589_639282_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|453aa|up_7|NZ_CP040505.1_639278_640637_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|200aa|up_6|NZ_CP040505.1_641038_641638_-	cd01835, SGNH_hydrolase_like_3, SGNH_hydrolase subfamily	NA|1276aa|up_5|NZ_CP040505.1_641654_645482_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|438aa|up_4|NZ_CP040505.1_645889_647203_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|356aa|up_3|NZ_CP040505.1_647199_648267_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|233aa|up_2|NZ_CP040505.1_648708_649407_+	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane]	NA|272aa|up_1|NZ_CP040505.1_649406_650222_+	cd08561, GDPD_cytoplasmic_ScUgpQ2_like, Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins	NA|471aa|up_0|NZ_CP040505.1_651340_652753_-	pfam16980, CitMHS_2, Putative citrate transport	NA|152aa|down_0|NZ_CP040505.1_653656_654112_+	PRK05571, PRK05571, ribose-5-phosphate isomerase B; Provisional	NA|221aa|down_1|NZ_CP040505.1_654185_654848_-	NA	NA|353aa|down_2|NZ_CP040505.1_654858_655917_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|293aa|down_3|NZ_CP040505.1_656022_656901_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|282aa|down_4|NZ_CP040505.1_656897_657743_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|444aa|down_5|NZ_CP040505.1_657838_659170_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|560aa|down_6|NZ_CP040505.1_659532_661212_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|476aa|down_7|NZ_CP040505.1_661214_662642_+	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase	NA|271aa|down_8|NZ_CP040505.1_663010_663823_-	NA	NA|861aa|down_9|NZ_CP040505.1_664346_666929_-	TIGR01970, ATP-dependent_RNA_helicase_HrpB, ATP-dependent helicase HrpB
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	22	712710-712922	4	CRT	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	TCAATCCCAGCTCCCACGTGGGCATGGT	28	0	0	NA	NA	NA	3	3	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|75aa|up_9|NZ_CP040505.1_700557_700782_+,NA|162aa|up_6|NZ_CP040505.1_703881_704367_-,NA|390aa|up_5|NZ_CP040505.1_704419_705589_-,NA|96aa|down_8|NZ_CP040505.1_722990_723278_-	NA|75aa|up_9|NZ_CP040505.1_700557_700782_+	NA	NA|654aa|up_8|NZ_CP040505.1_700834_702796_+	PRK05667, dnaG, DNA primase; Validated	NA|163aa|up_7|NZ_CP040505.1_703224_703713_+	PRK02260, PRK02260, S-ribosylhomocysteine lyase	NA|162aa|up_6|NZ_CP040505.1_703881_704367_-	NA	NA|390aa|up_5|NZ_CP040505.1_704419_705589_-	NA	NA|157aa|up_4|NZ_CP040505.1_705661_706132_+	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed	NA|349aa|up_3|NZ_CP040505.1_706137_707184_+	PRK12327, nusA, transcription elongation factor NusA; Provisional	NA|103aa|up_2|NZ_CP040505.1_707223_707532_+	pfam04296, DUF448, Protein of unknown function (DUF448)	NA|982aa|up_1|NZ_CP040505.1_707639_710585_+	PRK05306, infB, translation initiation factor IF-2; Validated	NA|344aa|up_0|NZ_CP040505.1_711153_712185_-	COG2852, COG2852, Very-short-patch-repair endonuclease [Replication, recombination,    and repair]	NA|146aa|down_0|NZ_CP040505.1_713206_713644_+	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|486aa|down_1|NZ_CP040505.1_713646_715104_+	PRK03287, truB, tRNA pseudouridine synthase B; Provisional	NA|330aa|down_2|NZ_CP040505.1_715100_716090_+	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|90aa|down_3|NZ_CP040505.1_716707_716977_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|783aa|down_4|NZ_CP040505.1_717416_719765_+	TIGR02696, polyribonucleotide_nucleotidyltransferase, guanosine pentaphosphate synthetase I/polynucleotide phosphorylase	NA|292aa|down_5|NZ_CP040505.1_720477_721353_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|251aa|down_6|NZ_CP040505.1_721295_722048_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|67aa|down_7|NZ_CP040505.1_722655_722856_-	PHA01623, PHA01623, hypothetical protein	NA|96aa|down_8|NZ_CP040505.1_722990_723278_-	NA	NA|36aa|down_9|NZ_CP040505.1_723306_723414_-	pfam13936, HTH_38, Helix-turn-helix domain
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	23	762899-762984	21	CRISPRCasFinder	no	DinG	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Type IV-A	GCTCCTTCCGTACAATGACGGGGTG	25	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|186aa|up_1|NZ_CP040505.1_761755_762313_-,NA|149aa|up_0|NZ_CP040505.1_762305_762752_-,NA	NA|966aa|up_9|NZ_CP040505.1_752533_755431_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|210aa|up_8|NZ_CP040505.1_755451_756081_+	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|105aa|up_7|NZ_CP040505.1_756247_756562_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|78aa|up_6|NZ_CP040505.1_756564_756798_+	pfam11248, DUF3046, Protein of unknown function (DUF3046)	NA|369aa|up_5|NZ_CP040505.1_757083_758190_+	PRK09354, recA, recombinase A; Provisional	NA|198aa|up_4|NZ_CP040505.1_758196_758790_+	PRK00117, recX, recombination regulator RecX; Reviewed	NA|165aa|up_3|NZ_CP040505.1_759131_759626_+	pfam02464, CinA, Competence-damaged protein	NA|508aa|up_2|NZ_CP040505.1_759636_761160_+	PRK14326, PRK14326, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|186aa|up_1|NZ_CP040505.1_761755_762313_-	NA	NA|149aa|up_0|NZ_CP040505.1_762305_762752_-	NA	NA|346aa|down_0|NZ_CP040505.1_762987_764025_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|206aa|down_1|NZ_CP040505.1_764299_764917_-	pfam05175, MTS, Methyltransferase small domain	NA|554aa|down_2|NZ_CP040505.1_765164_766826_+	TIGR03156, GTP_HflX, GTP-binding protein HflX	DinG|658aa|down_3|NZ_CP040505.1_766818_768792_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|330aa|down_4|NZ_CP040505.1_768984_769974_+	cd05292, LDH_2, A subgroup of L-lactate dehydrogenases	NA|236aa|down_5|NZ_CP040505.1_770193_770901_-	PRK00215, PRK00215, transcriptional repressor LexA	NA|161aa|down_6|NZ_CP040505.1_771089_771572_+	pfam01476, LysM, LysM domain	NA|603aa|down_7|NZ_CP040505.1_772461_774270_-	PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated	NA|402aa|down_8|NZ_CP040505.1_774376_775582_-	PRK11790, PRK11790, phosphoglycerate dehydrogenase	NA|386aa|down_9|NZ_CP040505.1_778580_779738_+	pfam09754, PAC2, PAC2 family
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	24	972312-972403	22	CRISPRCasFinder	no	cas4	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	CGTCCTACCCGTTCCCGCAAGGAGAATCGGG	31	0	0	NA	NA	NA	1	1	Unclear	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|64aa|up_9|NZ_CP040505.1_961091_961283_-,NA|63aa|up_8|NZ_CP040505.1_961332_961521_+,NA|61aa|up_7|NZ_CP040505.1_961546_961729_+,NA|158aa|down_2|NZ_CP040505.1_973915_974389_+	NA|64aa|up_9|NZ_CP040505.1_961091_961283_-	NA	NA|63aa|up_8|NZ_CP040505.1_961332_961521_+	NA	NA|61aa|up_7|NZ_CP040505.1_961546_961729_+	NA	NA|252aa|up_6|NZ_CP040505.1_961753_962509_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|303aa|up_5|NZ_CP040505.1_962523_963432_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|312aa|up_4|NZ_CP040505.1_963491_964427_-	cd01004, PBP2_MidA_like, Mimosine binding domain of ABC-type transporter MidA and similar proteins; the type 2 periplasmic binding protein fold	NA|231aa|up_3|NZ_CP040505.1_964741_965434_-	pfam13829, DUF4191, Domain of unknown function (DUF4191)	NA|427aa|up_2|NZ_CP040505.1_965544_966825_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|593aa|up_1|NZ_CP040505.1_968465_970244_-	TIGR02927, putative_dihydrolipoamide_acyltransferase, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	NA|458aa|up_0|NZ_CP040505.1_970269_971643_-	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|154aa|down_0|NZ_CP040505.1_972493_972955_-	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|178aa|down_1|NZ_CP040505.1_973018_973552_-	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea	NA|158aa|down_2|NZ_CP040505.1_973915_974389_+	NA	NA|538aa|down_3|NZ_CP040505.1_974385_975999_+	cd03468, PolY_like, DNA Polymerase Y-family	NA|1039aa|down_4|NZ_CP040505.1_976070_979187_+	cd18012, DEXQc_arch_SWI2_SNF2, DEAQ-box helicase domain of archaeal and bacterial SNF2-related proteins	NA|1244aa|down_5|NZ_CP040505.1_979394_983126_+	PRK05672, dnaE2, error-prone DNA polymerase; Validated	NA|222aa|down_6|NZ_CP040505.1_983378_984044_-	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065	NA|144aa|down_7|NZ_CP040505.1_984216_984648_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|251aa|down_8|NZ_CP040505.1_984897_985650_+	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif	NA|347aa|down_9|NZ_CP040505.1_985652_986693_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	25	1047497-1048908	23,5,3	CRISPRCasFinder,CRT,PILER-CR	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GTCTTAATGCACCTTATGGCGCGAGGTGCTTTCTGAC,GTCTTAATGCACCTTATGGCGCGAGGTGCTTTCTGAC,GTCTTAATGCACCTTATGGCGCGAGGTGCTTTCTGAC	37,37,37	1	1	1048256-1048291	NZ_CP040505.1_1369495-1369530	NA:NA:NA	19,19,18	19	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|172aa|up_9|NZ_CP040505.1_1037183_1037699_-	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|258aa|up_8|NZ_CP040505.1_1037861_1038635_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|144aa|up_7|NZ_CP040505.1_1038631_1039063_-	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|258aa|up_6|NZ_CP040505.1_1039125_1039899_-	pfam05949, DUF881, Bacterial protein of unknown function (DUF881)	NA|111aa|up_5|NZ_CP040505.1_1039900_1040233_-	COG3856, Sbp, Uncharacterized conserved protein (small basic protein) [Function unknown]	NA|286aa|up_4|NZ_CP040505.1_1040234_1041092_-	pfam05949, DUF881, Bacterial protein of unknown function (DUF881)	NA|850aa|up_3|NZ_CP040505.1_1041099_1043649_-	TIGR02412, Aminopeptidase_N, aminopeptidase N, Streptomyces lividans type	NA|528aa|up_2|NZ_CP040505.1_1043731_1045315_+	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional	NA|486aa|up_1|NZ_CP040505.1_1045409_1046867_+	PRK03003, PRK03003, GTP-binding protein Der; Reviewed	NA|172aa|up_0|NZ_CP040505.1_1046876_1047392_+	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|227aa|down_0|NZ_CP040505.1_1049467_1050148_-	TIGR02228, Signal_peptidase_I_W, signal peptidase I, archaeal type	NA|213aa|down_1|NZ_CP040505.1_1050154_1050793_-	TIGR04089, conserved_hypothetical_protein, alternate signal-mediated exported protein, RER_14450 family	NA|904aa|down_2|NZ_CP040505.1_1050956_1053668_-	cd15482, Sialidase_non-viral, Non-viral sialidases	NA|391aa|down_3|NZ_CP040505.1_1054081_1055254_+	PRK07337, PRK07337, pyridoxal phosphate-dependent aminotransferase	NA|244aa|down_4|NZ_CP040505.1_1055416_1056148_-	PRK00023, cmk, (d)CMP kinase	NA|380aa|down_5|NZ_CP040505.1_1056193_1057333_-	PRK06545, PRK06545, prephenate dehydrogenase; Validated	NA|250aa|down_6|NZ_CP040505.1_1057334_1058084_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|192aa|down_7|NZ_CP040505.1_1058080_1058656_-	pfam04079, SMC_ScpB, Segregation and condensation complex subunit ScpB	NA|280aa|down_8|NZ_CP040505.1_1058645_1059485_-	COG1354, scpA, Rec8/ScpA/Scc1-like protein (kleisin family) [Replication,    recombination, and repair]	NA|288aa|down_9|NZ_CP040505.1_1059468_1060332_-	pfam13614, AAA_31, AAA domain
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	26	1211728-1211935	24	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GCAGGCCCCATGGGCGCGGGTGGGCC	26	0	0	NA	NA	NA	3	3	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|413aa|up_9|NZ_CP040505.1_1202127_1203366_-	pfam02163, Peptidase_M50, Peptidase family M50	NA|412aa|up_8|NZ_CP040505.1_1203365_1204601_-	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional	NA|184aa|up_7|NZ_CP040505.1_1204597_1205149_-	TIGR03543, divI1A_rptt_fam, DivIVA domain repeat protein	NA|412aa|up_6|NZ_CP040505.1_1205145_1206381_-	PRK14459, PRK14459, ribosomal RNA large subunit methyltransferase N; Provisional	NA|296aa|up_5|NZ_CP040505.1_1206377_1207265_-	pfam01148, CTP_transf_1, Cytidylyltransferase family	NA|186aa|up_4|NZ_CP040505.1_1207270_1207828_-	PRK00083, frr, ribosome recycling factor; Reviewed	NA|239aa|up_3|NZ_CP040505.1_1207845_1208562_-	PRK00358, pyrH, uridylate kinase; Provisional	NA|276aa|up_2|NZ_CP040505.1_1208657_1209485_-	PRK09377, tsf, elongation factor Ts; Provisional	NA|281aa|up_1|NZ_CP040505.1_1209515_1210358_-	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|313aa|up_0|NZ_CP040505.1_1210563_1211502_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|380aa|down_0|NZ_CP040505.1_1212841_1213981_-	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion]	NA|518aa|down_1|NZ_CP040505.1_1213970_1215524_-	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|151aa|down_2|NZ_CP040505.1_1215502_1215955_-	PRK12497, PRK12497, YraN family protein	NA|100aa|down_3|NZ_CP040505.1_1216126_1216426_-	pfam10611, DUF2469, Protein of unknown function (DUF2469)	NA|223aa|down_4|NZ_CP040505.1_1216501_1217170_-	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like	NA|236aa|down_5|NZ_CP040505.1_1217169_1217877_-	TIGR02227, Inactive_signal_peptidase_IA	NA|119aa|down_6|NZ_CP040505.1_1217995_1218352_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|448aa|down_7|NZ_CP040505.1_1218526_1219870_-	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|175aa|down_8|NZ_CP040505.1_1219866_1220391_-	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|80aa|down_9|NZ_CP040505.1_1220493_1220733_-	PRK02821, PRK02821, RNA-binding protein
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	27	1228294-1228599	25	CRISPRCasFinder	no	DEDDh	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	GGTCTTCTTCGTTGTGCGACGCGTCGTCTTCTTCGC	36	0	0	NA	NA	NA	4	4	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|119aa|up_9|NZ_CP040505.1_1217995_1218352_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|448aa|up_8|NZ_CP040505.1_1218526_1219870_-	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|175aa|up_7|NZ_CP040505.1_1219866_1220391_-	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|80aa|up_6|NZ_CP040505.1_1220493_1220733_-	PRK02821, PRK02821, RNA-binding protein	NA|150aa|up_5|NZ_CP040505.1_1220734_1221184_-	PRK14520, rpsP, 30S ribosomal protein S16; Provisional	NA|329aa|up_4|NZ_CP040505.1_1221364_1222351_+	COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism]	NA|366aa|up_3|NZ_CP040505.1_1222379_1223477_-	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|529aa|up_2|NZ_CP040505.1_1223473_1225060_-	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|412aa|up_1|NZ_CP040505.1_1225174_1226410_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|112aa|up_0|NZ_CP040505.1_1226463_1226799_-	PRK14855, nhaA, pH-dependent sodium/proton antiporter; Provisional	NA|364aa|down_0|NZ_CP040505.1_1228933_1230025_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|117aa|down_1|NZ_CP040505.1_1230188_1230539_-	pfam18367, Rv2175c_C, Rv2175c C-terminal domain of unknown function	NA|480aa|down_2|NZ_CP040505.1_1232730_1234170_-	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family	NA|406aa|down_3|NZ_CP040505.1_1234166_1235384_-	PRK06555, PRK06555, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated	NA|273aa|down_4|NZ_CP040505.1_1235507_1236326_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	DEDDh|247aa|down_5|NZ_CP040505.1_1236494_1237235_+	PRK07883, PRK07883, DEDD exonuclease domain-containing protein	NA|131aa|down_6|NZ_CP040505.1_1237390_1237783_-	cd17574, REC_OmpR, phosphoacceptor receiver (REC) domain of OmpR family response regulators	NA|359aa|down_7|NZ_CP040505.1_1237895_1238972_-	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|118aa|down_8|NZ_CP040505.1_1238868_1239222_-	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein	NA|327aa|down_9|NZ_CP040505.1_1239373_1240354_-	pfam02595, Gly_kinase, Glycerate kinase family
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	28	1286087-1286242	4	PILER-CR	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	TCACCCTCTGTCCCACGCGCCAGCAGAGCACCC	33	0	0	NA	NA	NA	2	2	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|149aa|up_3|NZ_CP040505.1_1283746_1284193_+,NA|349aa|down_0|NZ_CP040505.1_1287309_1288356_+,NA|231aa|down_1|NZ_CP040505.1_1288734_1289427_-,NA|138aa|down_2|NZ_CP040505.1_1289501_1289915_+	NA|203aa|up_9|NZ_CP040505.1_1275701_1276310_+	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase	NA|164aa|up_8|NZ_CP040505.1_1276378_1276870_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|321aa|up_7|NZ_CP040505.1_1276877_1277840_-	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]	NA|978aa|up_6|NZ_CP040505.1_1277955_1280889_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|149aa|up_5|NZ_CP040505.1_1281004_1281451_+	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]	NA|248aa|up_4|NZ_CP040505.1_1281893_1282637_-	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription]	NA|149aa|up_3|NZ_CP040505.1_1283746_1284193_+	NA	NA|124aa|up_2|NZ_CP040505.1_1284152_1284524_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|187aa|up_1|NZ_CP040505.1_1284670_1285231_+	pfam14568, SUKH_6, SMI1-KNR4 cell-wall	NA|159aa|up_0|NZ_CP040505.1_1285335_1285812_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|349aa|down_0|NZ_CP040505.1_1287309_1288356_+	NA	NA|231aa|down_1|NZ_CP040505.1_1288734_1289427_-	NA	NA|138aa|down_2|NZ_CP040505.1_1289501_1289915_+	NA	NA|373aa|down_3|NZ_CP040505.1_1290318_1291437_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|422aa|down_4|NZ_CP040505.1_1291436_1292702_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|333aa|down_5|NZ_CP040505.1_1292698_1293697_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|264aa|down_6|NZ_CP040505.1_1293698_1294490_-	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases	NA|764aa|down_7|NZ_CP040505.1_1294709_1297001_+	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|367aa|down_8|NZ_CP040505.1_1297180_1298281_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|683aa|down_9|NZ_CP040505.1_1298581_1300630_+	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	29	1349233-1349311	26	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CTCCCCTCCGAGCCCCCGACTCCC	24	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|446aa|up_9|NZ_CP040505.1_1336381_1337719_-	cd00585, Peptidase_C1B, Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC)	NA|300aa|up_8|NZ_CP040505.1_1337859_1338759_+	PRK15172, PRK15172, aldose-1-epimerase	NA|261aa|up_7|NZ_CP040505.1_1338907_1339690_-	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional	NA|372aa|up_6|NZ_CP040505.1_1339686_1340802_-	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ	NA|340aa|up_5|NZ_CP040505.1_1340869_1341889_-	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|305aa|up_4|NZ_CP040505.1_1341992_1342907_-	pfam11296, DUF3097, Protein of unknown function (DUF3097)	NA|656aa|up_3|NZ_CP040505.1_1343020_1344988_-	TIGR00733, TIGR00733, putative oligopeptide transporter, OPT family	NA|418aa|up_2|NZ_CP040505.1_1345187_1346441_-	PRK05628, PRK05628, coproporphyrinogen III oxidase; Validated	NA|276aa|up_1|NZ_CP040505.1_1346437_1347265_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|619aa|up_0|NZ_CP040505.1_1347261_1349118_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|350aa|down_0|NZ_CP040505.1_1349369_1350419_-	cd03218, ABC_YhbG, ATP-binding cassette component of YhbG transport system	NA|88aa|down_1|NZ_CP040505.1_1350851_1351115_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|326aa|down_2|NZ_CP040505.1_1351274_1352252_-	PRK07914, PRK07914, hypothetical protein; Reviewed	NA|521aa|down_3|NZ_CP040505.1_1352277_1353840_-	pfam03772, Competence, Competence protein	NA|273aa|down_4|NZ_CP040505.1_1353836_1354655_-	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]	NA|647aa|down_5|NZ_CP040505.1_1354847_1356788_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|273aa|down_6|NZ_CP040505.1_1356894_1357713_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|428aa|down_7|NZ_CP040505.1_1357820_1359104_-	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|193aa|down_8|NZ_CP040505.1_1359100_1359679_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|912aa|down_9|NZ_CP040505.1_1359885_1362621_+	NF000540, alt_ValS, valine--tRNA ligase
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	30	1388439-1388527	27	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CCTTCCTCCACTTGCGTGAAGACTCGGC	28	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|126aa|up_9|NZ_CP040505.1_1378229_1378607_-,NA|306aa|up_6|NZ_CP040505.1_1381027_1381945_-,NA	NA|126aa|up_9|NZ_CP040505.1_1378229_1378607_-	NA	NA|345aa|up_8|NZ_CP040505.1_1379017_1380052_-	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau	NA|118aa|up_7|NZ_CP040505.1_1380655_1381009_-	cd12952, MMP_ACEL2062, Minimal MMP-like domain found in Acidothermus cellulolyticus hypothetical protein ACEL2062 and similar protein	NA|306aa|up_6|NZ_CP040505.1_1381027_1381945_-	NA	NA|379aa|up_5|NZ_CP040505.1_1382059_1383196_-	PRK01966, ddl, D-alanine--D-alanine ligase	NA|344aa|up_4|NZ_CP040505.1_1383345_1384377_-	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|135aa|up_3|NZ_CP040505.1_1384671_1385076_+	cd02079, P-type_ATPase_HM, P-type heavy metal-transporting ATPase	NA|260aa|up_2|NZ_CP040505.1_1385176_1385956_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|326aa|up_1|NZ_CP040505.1_1385983_1386961_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|442aa|up_0|NZ_CP040505.1_1386957_1388283_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|467aa|down_0|NZ_CP040505.1_1389195_1390596_-	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit	NA|245aa|down_1|NZ_CP040505.1_1390773_1391508_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|502aa|down_2|NZ_CP040505.1_1392544_1394050_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|394aa|down_3|NZ_CP040505.1_1394287_1395469_+	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|258aa|down_4|NZ_CP040505.1_1395750_1396524_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|486aa|down_5|NZ_CP040505.1_1396893_1398351_-	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|891aa|down_6|NZ_CP040505.1_1398505_1401178_+	pfam12029, DUF3516, Domain of unknown function (DUF3516)	NA|101aa|down_7|NZ_CP040505.1_1401347_1401650_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|136aa|down_8|NZ_CP040505.1_1401646_1402054_+	cd09874, PIN_MT3492-like, VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins	NA|438aa|down_9|NZ_CP040505.1_1402237_1403551_+	pfam09587, PGA_cap, Bacterial capsule synthesis protein PGA_cap
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	31	1813159-1813242	28	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CACCCCTCCCATCCTCATGTGGT	23	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|286aa|up_2|NZ_CP040505.1_1809596_1810454_-,NA|398aa|down_1|NZ_CP040505.1_1818789_1819983_+,NA|535aa|down_5|NZ_CP040505.1_1824142_1825747_-	NA|420aa|up_9|NZ_CP040505.1_1800868_1802128_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|421aa|up_8|NZ_CP040505.1_1802186_1803449_-	pfam10080, DUF2318, Predicted membrane protein (DUF2318)	NA|209aa|up_7|NZ_CP040505.1_1803698_1804325_-	pfam10634, Iron_transport, Fe2+ transport protein	NA|482aa|up_6|NZ_CP040505.1_1804366_1805812_-	COG0672, FTR1, High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism]	NA|231aa|up_5|NZ_CP040505.1_1806466_1807159_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|403aa|up_4|NZ_CP040505.1_1807160_1808369_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|398aa|up_3|NZ_CP040505.1_1808406_1809600_-	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]	NA|286aa|up_2|NZ_CP040505.1_1809596_1810454_-	NA	NA|169aa|up_1|NZ_CP040505.1_1810495_1811002_-	pfam14387, DUF4418, Domain of unknown function (DUF4418)	NA|553aa|up_0|NZ_CP040505.1_1811278_1812937_+	COG1620, LldP, L-lactate permease [Energy production and conversion]	NA|903aa|down_0|NZ_CP040505.1_1813524_1816233_-	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|398aa|down_1|NZ_CP040505.1_1818789_1819983_+	NA	NA|285aa|down_2|NZ_CP040505.1_1819996_1820851_+	pfam04536, TPM_phosphatase, TPM domain	NA|400aa|down_3|NZ_CP040505.1_1820941_1822141_+	pfam14471, DUF4428, Domain of unknown function (DUF4428)	NA|570aa|down_4|NZ_CP040505.1_1822439_1824149_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|535aa|down_5|NZ_CP040505.1_1824142_1825747_-	NA	NA|270aa|down_6|NZ_CP040505.1_1825743_1826553_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|824aa|down_7|NZ_CP040505.1_1826659_1829131_-	CHL00095, clpC, Clp protease ATP binding subunit	NA|275aa|down_8|NZ_CP040505.1_1829371_1830196_+	pfam13228, DUF4037, Domain of unknown function (DUF4037)	NA|425aa|down_9|NZ_CP040505.1_1830517_1831792_+	sd00037, PASTA, PASTA domain
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	32	1887100-1891032	29,6,5	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	GGCTCATCCCCGCTCACGCGGGGAGCAC,GGCTCATCCCCGCTCACGCGGGGAGCAC,GGCTCATCCCCGCTCACGCGGGGAGCAC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	64,64,62	64	TypeI-E	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|164aa|up_6|NZ_CP040505.1_1878234_1878726_-,NA|98aa|up_5|NZ_CP040505.1_1880598_1880892_+,NA|155aa|up_0|NZ_CP040505.1_1886113_1886578_-,NA	NA|142aa|up_9|NZ_CP040505.1_1875497_1875923_-	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional	NA|388aa|up_8|NZ_CP040505.1_1875922_1877086_-	COG0354, COG0354, Predicted aminomethyltransferase related to GcvT [General function prediction only]	NA|217aa|up_7|NZ_CP040505.1_1877373_1878024_-	pfam08768, DUF1794, Domain of unknown function (DUF1794)	NA|164aa|up_6|NZ_CP040505.1_1878234_1878726_-	NA	NA|98aa|up_5|NZ_CP040505.1_1880598_1880892_+	NA	NA|427aa|up_4|NZ_CP040505.1_1881187_1882468_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|421aa|up_3|NZ_CP040505.1_1882945_1884208_-	pfam13635, DUF4143, Domain of unknown function (DUF4143)	NA|75aa|up_2|NZ_CP040505.1_1884469_1884694_-	COG4877, COG4877, Uncharacterized protein conserved in bacteria [Function unknown]	NA|321aa|up_1|NZ_CP040505.1_1884763_1885726_-	cd03402, SPFH_like_u2, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|155aa|up_0|NZ_CP040505.1_1886113_1886578_-	NA	cas2|135aa|down_0|NZ_CP040505.1_1891050_1891455_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|318aa|down_1|NZ_CP040505.1_1891461_1892415_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|253aa|down_2|NZ_CP040505.1_1892411_1893170_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|242aa|down_3|NZ_CP040505.1_1893169_1893895_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|375aa|down_4|NZ_CP040505.1_1893891_1895016_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|230aa|down_5|NZ_CP040505.1_1895030_1895720_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|555aa|down_6|NZ_CP040505.1_1895716_1897381_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|944aa|down_7|NZ_CP040505.1_1897380_1900212_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|326aa|down_8|NZ_CP040505.1_1900851_1901829_-	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|389aa|down_9|NZ_CP040505.1_1902327_1903494_+	pfam00872, Transposase_mut, Transposase, Mutator family
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	33	1918556-1918644	30	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CATCCCACCCTCACGACGGGACGTGAC	27	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|1509aa|up_3|NZ_CP040505.1_1906755_1911282_+,NA|99aa|down_9|NZ_CP040505.1_1931338_1931635_+	cas8e|555aa|up_9|NZ_CP040505.1_1895716_1897381_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|944aa|up_8|NZ_CP040505.1_1897380_1900212_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|326aa|up_7|NZ_CP040505.1_1900851_1901829_-	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|389aa|up_6|NZ_CP040505.1_1902327_1903494_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|484aa|up_5|NZ_CP040505.1_1903741_1905193_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|282aa|up_4|NZ_CP040505.1_1905829_1906675_+	pfam13569, DUF4132, Domain of unknown function (DUF4132)	NA|1509aa|up_3|NZ_CP040505.1_1906755_1911282_+	NA	NA|378aa|up_2|NZ_CP040505.1_1911514_1912648_+	pfam07728, AAA_5, AAA domain (dynein-related subfamily)	NA|1136aa|up_1|NZ_CP040505.1_1912810_1916218_+	pfam05762, VWA_CoxE, VWA domain containing CoxE-like protein	NA|672aa|up_0|NZ_CP040505.1_1916214_1918230_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|528aa|down_0|NZ_CP040505.1_1918717_1920301_-	PRK09225, PRK09225, threonine synthase; Validated	NA|195aa|down_1|NZ_CP040505.1_1920908_1921493_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|214aa|down_2|NZ_CP040505.1_1921818_1922460_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|455aa|down_3|NZ_CP040505.1_1922712_1924077_-	COG2270, COG2270, Permeases of the major facilitator superfamily [General function prediction only]	NA|177aa|down_4|NZ_CP040505.1_1924419_1924950_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|171aa|down_5|NZ_CP040505.1_1925378_1925891_-	COG1329, COG1329, Transcriptional regulators, similar to M	NA|245aa|down_6|NZ_CP040505.1_1926085_1926820_-	PRK14120, gpmA, phosphoglyceromutase; Provisional	NA|111aa|down_7|NZ_CP040505.1_1926887_1927220_-	pfam11774, Lsr2, Lsr2	NA|360aa|down_8|NZ_CP040505.1_1929891_1930971_-	PRK00035, hemH, ferrochelatase; Reviewed	NA|99aa|down_9|NZ_CP040505.1_1931338_1931635_+	NA
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	34	1931467-1931547	31	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CCCAGCGCCAGCCGAAACCCAGGCGCAAGTC	31	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|113aa|down_4|NZ_CP040505.1_1939729_1940068_-	NA|672aa|up_9|NZ_CP040505.1_1916214_1918230_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|528aa|up_8|NZ_CP040505.1_1918717_1920301_-	PRK09225, PRK09225, threonine synthase; Validated	NA|195aa|up_7|NZ_CP040505.1_1920908_1921493_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|214aa|up_6|NZ_CP040505.1_1921818_1922460_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|455aa|up_5|NZ_CP040505.1_1922712_1924077_-	COG2270, COG2270, Permeases of the major facilitator superfamily [General function prediction only]	NA|177aa|up_4|NZ_CP040505.1_1924419_1924950_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|171aa|up_3|NZ_CP040505.1_1925378_1925891_-	COG1329, COG1329, Transcriptional regulators, similar to M	NA|245aa|up_2|NZ_CP040505.1_1926085_1926820_-	PRK14120, gpmA, phosphoglyceromutase; Provisional	NA|111aa|up_1|NZ_CP040505.1_1926887_1927220_-	pfam11774, Lsr2, Lsr2	NA|360aa|up_0|NZ_CP040505.1_1929891_1930971_-	PRK00035, hemH, ferrochelatase; Reviewed	NA|554aa|down_0|NZ_CP040505.1_1931704_1933366_-	pfam08386, Abhydrolase_4, TAP-like protein	NA|413aa|down_1|NZ_CP040505.1_1933527_1934766_-	PRK07940, PRK07940, DNA polymerase III subunit delta'; Validated	NA|324aa|down_2|NZ_CP040505.1_1934732_1935704_-	PRK00698, tmk, thymidylate kinase; Validated	NA|907aa|down_3|NZ_CP040505.1_1936146_1938867_-	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated	NA|113aa|down_4|NZ_CP040505.1_1939729_1940068_-	NA	NA|324aa|down_5|NZ_CP040505.1_1941782_1942754_+	pfam05661, DUF808, Protein of unknown function (DUF808)	NA|208aa|down_6|NZ_CP040505.1_1943244_1943868_+	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|562aa|down_7|NZ_CP040505.1_1944537_1946223_-	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|89aa|down_8|NZ_CP040505.1_1946225_1946492_-	pfam00381, PTS-HPr, PTS HPr component phosphorylation site	NA|340aa|down_9|NZ_CP040505.1_1946802_1947822_+	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	35	2113265-2113362	32	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	TTCCTTCTGCGCCTCCGCTCCCGTCA	26	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|202aa|up_7|NZ_CP040505.1_2103483_2104089_-,NA|214aa|up_3|NZ_CP040505.1_2106885_2107527_+,NA|73aa|down_2|NZ_CP040505.1_2117125_2117344_+,NA|349aa|down_9|NZ_CP040505.1_2123886_2124933_+	NA|88aa|up_9|NZ_CP040505.1_2101428_2101692_+	pfam06781, CrgA, Cell division protein CrgA	NA|290aa|up_8|NZ_CP040505.1_2102351_2103221_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|202aa|up_7|NZ_CP040505.1_2103483_2104089_-	NA	NA|174aa|up_6|NZ_CP040505.1_2104238_2104760_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|285aa|up_5|NZ_CP040505.1_2104860_2105715_+	pfam01694, Rhomboid, Rhomboid family	NA|251aa|up_4|NZ_CP040505.1_2106037_2106790_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|214aa|up_3|NZ_CP040505.1_2106885_2107527_+	NA	NA|157aa|up_2|NZ_CP040505.1_2107736_2108207_-	cd17569, REC_HupR-like, phosphoacceptor receiver (REC) domain of hydrogen uptake protein regulator (HupR) and similar domains	NA|691aa|up_1|NZ_CP040505.1_2108203_2110276_-	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|467aa|up_0|NZ_CP040505.1_2110277_2111678_-	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter	NA|363aa|down_0|NZ_CP040505.1_2114399_2115488_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|70aa|down_1|NZ_CP040505.1_2116362_2116572_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|73aa|down_2|NZ_CP040505.1_2117125_2117344_+	NA	NA|453aa|down_3|NZ_CP040505.1_2118040_2119399_-	TIGR00665, DnaB, replicative DNA helicase	NA|499aa|down_4|NZ_CP040505.1_2119707_2121204_+	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|97aa|down_5|NZ_CP040505.1_2121741_2122032_+	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|179aa|down_6|NZ_CP040505.1_2122075_2122612_+	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional	NA|81aa|down_7|NZ_CP040505.1_2122699_2122942_+	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|153aa|down_8|NZ_CP040505.1_2122960_2123419_+	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|349aa|down_9|NZ_CP040505.1_2123886_2124933_+	NA
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	36	2132912-2132996	33	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GGGCGTGGCGAATCCGACTCGGCG	24	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA|349aa|up_3|NZ_CP040505.1_2123886_2124933_+,NA|791aa|down_1|NZ_CP040505.1_2133576_2135949_+,NA|297aa|down_8|NZ_CP040505.1_2143868_2144759_-,NA|221aa|down_9|NZ_CP040505.1_2144736_2145399_-	NA|453aa|up_9|NZ_CP040505.1_2118040_2119399_-	TIGR00665, DnaB, replicative DNA helicase	NA|499aa|up_8|NZ_CP040505.1_2119707_2121204_+	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|97aa|up_7|NZ_CP040505.1_2121741_2122032_+	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|179aa|up_6|NZ_CP040505.1_2122075_2122612_+	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional	NA|81aa|up_5|NZ_CP040505.1_2122699_2122942_+	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|153aa|up_4|NZ_CP040505.1_2122960_2123419_+	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|349aa|up_3|NZ_CP040505.1_2123886_2124933_+	NA	NA|810aa|up_2|NZ_CP040505.1_2126298_2128728_-	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|488aa|up_1|NZ_CP040505.1_2129054_2130518_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|519aa|up_0|NZ_CP040505.1_2131007_2132564_-	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase	NA|179aa|down_0|NZ_CP040505.1_2133039_2133576_+	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily	NA|791aa|down_1|NZ_CP040505.1_2133576_2135949_+	NA	NA|584aa|down_2|NZ_CP040505.1_2135948_2137700_+	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|468aa|down_3|NZ_CP040505.1_2137692_2139096_+	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional	NA|345aa|down_4|NZ_CP040505.1_2139171_2140206_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|192aa|down_5|NZ_CP040505.1_2140504_2141080_+	PRK01617, PRK01617, hypothetical protein; Provisional	NA|250aa|down_6|NZ_CP040505.1_2141049_2141799_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|393aa|down_7|NZ_CP040505.1_2142130_2143309_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|297aa|down_8|NZ_CP040505.1_2143868_2144759_-	NA	NA|221aa|down_9|NZ_CP040505.1_2144736_2145399_-	NA
GCF_005886435.1_ASM588643v1	NZ_CP040505	Schaalia cardiffensis F0333 chromosome, complete genome	37	2220717-2220833	34	CRISPRCasFinder	no		cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CGGAGCTGAGACGAGTGGACTTGAGAA	27	0	0	NA	NA	NA	1	1	Orphan	cas1,cas2,csm3gr7,cas10,cas6,DEDDh,cas3,DinG,cas4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|155aa|up_9|NZ_CP040505.1_2203531_2203996_+	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|157aa|up_8|NZ_CP040505.1_2204297_2204768_+	pfam10006, DUF2249, Uncharacterized conserved protein (DUF2249)	NA|492aa|up_7|NZ_CP040505.1_2205066_2206542_-	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit	NA|516aa|up_6|NZ_CP040505.1_2206548_2208096_-	PRK09424, pntA, Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA|158aa|up_5|NZ_CP040505.1_2208284_2208758_+	cd08898, SRPBCC_CalC_Aha1-like_5, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|473aa|up_4|NZ_CP040505.1_2208880_2210299_+	PRK11049, PRK11049, D-alanine/D-serine/glycine permease; Provisional	NA|204aa|up_3|NZ_CP040505.1_2210926_2211538_+	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]	NA|276aa|up_2|NZ_CP040505.1_2214907_2215735_+	PRK06547, PRK06547, hypothetical protein; Provisional	NA|276aa|up_1|NZ_CP040505.1_2215878_2216706_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|886aa|up_0|NZ_CP040505.1_2216784_2219442_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|355aa|down_0|NZ_CP040505.1_2223156_2224221_+	PRK11898, PRK11898, prephenate dehydratase; Provisional	NA|415aa|down_1|NZ_CP040505.1_2224817_2226062_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|161aa|down_2|NZ_CP040505.1_2226355_2226838_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|195aa|down_3|NZ_CP040505.1_2226841_2227426_+	pfam13470, PIN_3, PIN domain	NA|425aa|down_4|NZ_CP040505.1_2227600_2228875_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|309aa|down_5|NZ_CP040505.1_2228871_2229798_+	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
