The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP035654	Enterococcus faecium strain UAMSEF_08 chromosome, complete genome	2827987	42923	58796	2827987	transposase	Streptococcus_phage(83.33%)	16	NA	NA
WP_130587603.1|42923_44180_+	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	28.4	9.1e-17
WP_002301399.1|44166_45126_-|transposase	IS30 family transposase	transposase	H7BW61	unidentified_phage	26.8	2.2e-10
WP_000421279.1|45981_46296_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	77.7	1.2e-42
WP_001234191.1|46316_46694_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	76.4	9.6e-47
WP_000185761.1|46703_47477_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001130244.1|47498_48902_+	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	66.5	2.2e-176
WP_000426689.1|49083_50268_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	68.1	6.3e-161
WP_000055376.1|50264_50555_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001009054.1|50551_50773_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	93.2	3.1e-29
WP_000675717.1|50814_51594_+	abortive infection family protein	NA	NA	NA	NA	NA
WP_000425404.1|51654_52155_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	63.0	1.7e-54
WP_000248477.1|52210_52849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000723887.1|52920_53316_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	72.6	5.9e-47
WP_000331165.1|53299_55753_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	78.9	0.0e+00
WP_000192393.1|55749_57777_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	65.3	5.1e-195
WP_000768373.1|57773_58796_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	75.5	2.4e-132
>prophage 2
NZ_CP035654	Enterococcus faecium strain UAMSEF_08 chromosome, complete genome	2827987	63426	70754	2827987	integrase	Streptococcus_phage(57.14%)	9	59790:59803	74132:74145
59790:59803	attL	TTGATAAAAAATTG	NA	NA	NA	NA
WP_000868795.1|63426_63924_-	trimethoprim-resistant dihydrofolate reductase DfrG	NA	G3MBI7	Bacillus_virus	49.1	4.0e-40
WP_001803271.1|65444_65612_+	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	62.0	2.3e-13
WP_001227350.1|65669_66023_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	89.7	2.2e-53
WP_010924747.1|66254_66365_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000675479.1|66493_66976_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	68.6	8.5e-48
WP_000845143.1|66972_67203_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	78.9	1.0e-27
WP_000633907.1|67700_67901_+	DUF3173 family protein	NA	NA	NA	NA	NA
WP_000237797.1|67927_69121_+|integrase	site-specific integrase	integrase	A0A0S2MV79	Bacillus_phage	34.2	8.3e-44
WP_002298578.1|69188_70754_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	30.6	3.5e-18
74132:74145	attR	CAATTTTTTATCAA	NA	NA	NA	NA
>prophage 3
NZ_CP035654	Enterococcus faecium strain UAMSEF_08 chromosome, complete genome	2827987	285563	295721	2827987		Streptococcus_phage(100.0%)	9	NA	NA
WP_032509114.1|285563_285788_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	97.1	8.5e-27
WP_002345010.1|285904_286402_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	97.6	1.3e-88
WP_002345009.1|286488_286881_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	99.2	4.6e-68
WP_050288986.1|286864_289312_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	98.3	0.0e+00
WP_002345008.1|289314_291498_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	82.3	2.9e-305
WP_002345007.1|291494_292496_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	95.5	1.3e-183
WP_074400123.1|292492_293425_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	91.6	5.1e-158
WP_012386611.1|293699_293786_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_002345005.1|293801_295721_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	96.6	0.0e+00
>prophage 4
NZ_CP035654	Enterococcus faecium strain UAMSEF_08 chromosome, complete genome	2827987	768771	777243	2827987		Streptococcus_phage(66.67%)	9	NA	NA
WP_002294039.1|768771_769416_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.6	4.2e-58
WP_002292340.1|769430_769760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288071.1|769773_770712_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	34.4	3.3e-35
WP_002288073.1|770747_771572_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002288076.1|771564_771912_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	41.1	5.1e-18
WP_002288078.1|771980_772853_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	60.4	3.1e-88
WP_002294035.1|772961_774083_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002288081.1|774136_774739_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	58.6	1.7e-53
WP_002288083.1|775053_777243_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.6	1.8e-286
>prophage 5
NZ_CP035654	Enterococcus faecium strain UAMSEF_08 chromosome, complete genome	2827987	831776	909216	2827987	protease,transposase,portal,head,holin,capsid,tail,terminase,tRNA,integrase	Enterococcus_phage(29.27%)	92	889351:889366	892704:892719
WP_002286621.1|831776_834575_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2H4UVG0	Bodo_saltans_virus	26.4	1.6e-74
WP_002286618.1|834623_836150_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	35.3	8.9e-75
WP_002286616.1|836164_836812_-	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_002286678.1|836995_837325_-	DUF4828 domain-containing protein	NA	NA	NA	NA	NA
WP_002286614.1|837501_838230_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA	NA
WP_002286612.1|838245_839259_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_002286608.1|839258_840536_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	28.8	5.8e-35
WP_002286607.1|840598_843301_+	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_002286606.1|843452_843770_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002286604.1|843799_844120_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002286601.1|844227_845688_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002286598.1|845755_845977_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286596.1|846007_846190_+	DUF3188 domain-containing protein	NA	NA	NA	NA	NA
WP_002286592.1|846189_846603_+	DUF3284 domain-containing protein	NA	NA	NA	NA	NA
WP_002286589.1|846725_847907_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002286587.1|848437_849577_-|integrase	site-specific integrase	integrase	Q9AZR0	Lactococcus_phage	47.1	2.6e-95
WP_002296617.1|849875_850511_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296616.1|850623_851259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303013.1|851292_851754_-	DUF4429 domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	34.8	4.5e-06
WP_002348715.1|851883_852315_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002296612.1|852332_852653_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SDR1	Streptococcus_phage	40.2	2.0e-13
WP_074394507.1|853088_853274_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077495106.1|853204_853393_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286679.1|853389_853647_+	phosphomannomutase	NA	NA	NA	NA	NA
WP_002286674.1|853617_853926_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085803886.1|854003_854777_+	phage antirepressor	NA	A0A1Q1PVU2	Staphylococcus_phage	52.2	4.1e-68
WP_002296611.1|854791_854995_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_047927434.1|855010_855331_+	DUF771 domain-containing protein	NA	NA	NA	NA	NA
WP_002351655.1|855512_856295_-	hypothetical protein	NA	NA	NA	NA	NA
WP_130587561.1|856345_857053_+	phage regulatory protein	NA	D2IYT0	Enterococcus_phage	42.0	4.3e-40
WP_060809376.1|857230_857572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286557.1|857564_858236_+	DUF1071 domain-containing protein	NA	A0A1B1P7F0	Bacillus_phage	47.4	4.2e-29
WP_002286553.1|858241_858928_+	hypothetical protein	NA	C9E2N1	Enterococcus_phage	69.1	3.2e-88
WP_002286552.1|858930_859680_+	helix-turn-helix domain-containing protein	NA	A0A1L2BY83	Clostridium_phage	54.0	1.7e-31
WP_002286696.1|859691_859961_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286695.1|860122_860425_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296606.1|860421_860583_+	antitoxin	NA	NA	NA	NA	NA
WP_002286694.1|860579_860885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286550.1|860884_861241_+	DUF1140 family protein	NA	A0A2H4JAZ4	uncultured_Caudovirales_phage	37.4	3.1e-10
WP_002296604.1|861200_861446_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286547.1|861442_861862_+	hypothetical protein	NA	D2IZL0	Enterococcus_phage	54.3	4.1e-30
WP_002286545.1|861858_862416_+	DUF1642 domain-containing protein	NA	A0A0C5KKV2	Enterococcus_phage	36.2	2.8e-10
WP_002286693.1|862412_862709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286542.1|862785_863199_+	autolysin	NA	C9E2P5	Enterococcus_phage	81.0	1.5e-56
WP_002300143.1|863656_863932_-	hypothetical protein	NA	A0A2H4JEH2	uncultured_Caudovirales_phage	45.7	9.9e-17
WP_002311723.1|864385_864592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086968564.1|864959_866101_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	57.7	3.8e-78
WP_002296600.1|866176_866344_+	thymidylate synthase	NA	NA	NA	NA	NA
WP_002286540.1|866369_866714_+	HNH endonuclease	NA	A0A1B1P757	Bacillus_phage	57.1	3.8e-26
WP_002296599.1|866718_867000_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286538.1|867102_867417_+|terminase	terminase	terminase	A0A1S7FYW6	Listeria_phage	37.9	3.3e-08
WP_002286533.1|867394_869089_+|terminase	terminase large subunit	terminase	A0A1B1P766	Bacillus_phage	49.6	3.0e-148
WP_002286530.1|869108_870287_+|portal	phage portal protein	portal	A0A1B1P754	Bacillus_phage	40.4	5.4e-80
WP_002286527.1|870249_870936_+|protease	Clp protease ClpP	protease	A0A2I6PDD0	Staphylococcus_phage	39.7	1.0e-30
WP_002286525.1|870935_872096_+|capsid	phage major capsid protein	capsid	A0A1B1P752	Bacillus_phage	50.1	1.8e-99
WP_002286524.1|872105_872981_+	hypothetical protein	NA	D2IYX3	Enterococcus_phage	74.2	5.6e-130
WP_002286523.1|872977_873289_+	hypothetical protein	NA	A0A1B1P751	Bacillus_phage	42.1	6.3e-12
WP_002286522.1|873278_873632_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_002296598.1|873621_874023_+	hypothetical protein	NA	A0A1B1P759	Bacillus_phage	33.3	1.1e-13
WP_002286516.1|874015_874420_+	hypothetical protein	NA	R4IBU7	Listeria_phage	29.5	6.1e-07
WP_002286512.1|874431_875040_+	hypothetical protein	NA	Q8W5Z9	Listeria_phage	41.1	3.0e-34
WP_002286510.1|875059_875422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305377.1|875424_875607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002348716.1|875623_879055_+|tail	phage tail tape measure protein	tail	A0A1D3SNL5	Enterococcus_phage	44.4	3.1e-67
WP_002299176.1|879105_879843_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_060806750.1|879852_882144_+	hypothetical protein	NA	A0A1D3SNL1	Enterococcus_phage	29.9	7.3e-89
WP_130587587.1|882167_884366_+	hypothetical protein	NA	A0A0M4RT83	Enterococcus_phage	39.0	1.0e-63
WP_002299182.1|884443_884686_+|holin	holin	holin	D2J075	Enterococcus_phage	68.4	9.6e-24
WP_005876842.1|884701_884899_+|holin	holin	holin	A0A0S2MYF6	Enterococcus_phage	84.4	1.0e-23
WP_130627722.1|884909_885929_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1G5SA77	Enterococcus_phage	66.1	4.1e-60
WP_087046766.1|886868_888030_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	4.1e-80
WP_002286474.1|888953_889361_+	hypothetical protein	NA	NA	NA	NA	NA
889351:889366	attL	AAAAAAATTAAGGAGA	NA	NA	NA	NA
WP_002296902.1|889374_889776_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286473.1|889777_890149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286680.1|890184_890487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076005172.1|890735_890936_-|integrase	tyrosine-type recombinase/integrase	integrase	Q9AZR0	Lactococcus_phage	75.7	4.6e-08
WP_002348827.1|891240_892473_-	aminopeptidase	NA	NA	NA	NA	NA
WP_002286467.1|892729_893299_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
892704:892719	attR	AAAAAAATTAAGGAGA	NA	NA	NA	NA
WP_002297963.1|893476_893917_-	flavodoxin	NA	NA	NA	NA	NA
WP_002294533.1|894074_894839_+	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_002286461.1|894870_895794_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_002286457.1|895869_897009_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_002286455.1|897001_897802_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_002286453.1|897801_898629_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_002321540.1|898606_899341_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_002286449.1|899440_900307_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	62.5	3.7e-102
WP_002286442.1|900320_900893_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	49.2	8.3e-42
WP_002294532.1|900914_901943_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	42.9	6.4e-69
WP_002286428.1|902040_902892_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	39.0	1.7e-38
WP_002348826.1|902925_904959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002371302.1|905002_906283_+	EpaQ family protein	NA	NA	NA	NA	NA
WP_010782578.1|907941_909216_-|transposase	ISL3-like element IS1476 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	36.1	8.6e-55
>prophage 6
NZ_CP035654	Enterococcus faecium strain UAMSEF_08 chromosome, complete genome	2827987	1540236	1597305	2827987	protease,tRNA,transposase,integrase	Streptococcus_phage(28.57%)	54	1536695:1536712	1571388:1571405
1536695:1536712	attL	ACAACATTTTCTTATTTT	NA	NA	NA	NA
WP_002296628.1|1540236_1541076_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002296627.1|1541260_1542148_+	rotamase	NA	NA	NA	NA	NA
WP_002311093.1|1542741_1543437_-	fructose-6-phosphate aldolase	NA	E3SKN5	Synechococcus_phage	31.5	1.0e-22
WP_002296624.1|1543420_1543819_-	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA	NA
WP_002287107.1|1544226_1545477_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002296760.1|1545618_1546614_-	PTS glucitol/sorbitol transporter subunit IIB	NA	NA	NA	NA	NA
WP_002289423.1|1546631_1547186_-	PTS sorbitol transporter subunit IIC	NA	NA	NA	NA	NA
WP_002289422.1|1547173_1547665_-	DeoR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002289421.1|1547657_1549526_-	HTH domain-containing protein	NA	NA	NA	NA	NA
WP_002289420.1|1549544_1550345_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.2	2.6e-09
WP_002289418.1|1550568_1550784_+	DUF378 domain-containing protein	NA	NA	NA	NA	NA
WP_002303864.1|1550922_1551408_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289415.1|1551863_1552277_+	Hsp20/alpha crystallin family protein	NA	A0A1B2LRT2	Wolbachia_phage	31.5	2.1e-07
WP_002322258.1|1552413_1552674_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303865.1|1552601_1552841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002321532.1|1552791_1553082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286097.1|1554662_1555616_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002288357.1|1555672_1556800_+|integrase	site-specific integrase	integrase	A0A2I7SCV1	Paenibacillus_phage	55.5	1.8e-109
WP_002288355.1|1556893_1558729_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.4	3.4e-20
WP_002288353.1|1558875_1560096_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002288352.1|1560115_1560610_+	nucleoside deoxyribosyltransferase	NA	A0A1W6JK28	Lactococcus_phage	56.5	7.2e-42
WP_002288350.1|1560602_1561274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288348.1|1561424_1564034_-	ATP-dependent chaperone ClpB	NA	A0A2I7SAX5	Vibrio_phage	35.0	1.6e-132
WP_002288347.1|1564284_1565331_-	flippase-like domain-containing protein	NA	NA	NA	NA	NA
WP_002288344.1|1565341_1565614_-	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_002288343.1|1565648_1566557_-	YegS/Rv2252/BmrU family lipid kinase	NA	NA	NA	NA	NA
WP_002288340.1|1566688_1567921_-	peptidase T	NA	NA	NA	NA	NA
WP_002288338.1|1567935_1569057_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_002288335.1|1569053_1569755_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_002288333.1|1571422_1571863_-	lipoprotein	NA	NA	NA	NA	NA
1571388:1571405	attR	ACAACATTTTCTTATTTT	NA	NA	NA	NA
WP_002288331.1|1571991_1572918_-	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	41.3	5.1e-33
WP_002288329.1|1572917_1574291_-	Replication initiation and membrane attachment	NA	NA	NA	NA	NA
WP_002288327.1|1574313_1574805_-	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_002288325.1|1575116_1575449_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288324.1|1575500_1576130_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_002288323.1|1576093_1576930_-	DNA-formamidopyrimidine glycosylase	NA	A0A127AWE5	Bacillus_phage	30.2	1.8e-24
WP_130587590.1|1576974_1579620_-	DNA polymerase I	NA	F8WQ35	Bacillus_phage	35.7	3.0e-54
WP_002296397.1|1579745_1580429_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA	NA
WP_002296398.1|1580421_1580907_-	dehydratase	NA	NA	NA	NA	NA
WP_002296400.1|1581213_1582548_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
WP_002296401.1|1582678_1583440_-	YdcF family protein	NA	NA	NA	NA	NA
WP_002296402.1|1583455_1583938_-	SprT family protein	NA	NA	NA	NA	NA
WP_002296403.1|1583957_1586138_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_002296404.1|1586281_1587013_-	serine/threonine protein phosphatase	NA	A7KV25	Bacillus_phage	30.8	1.7e-15
WP_002296405.1|1587081_1588023_-	rhodanese-related sulfurtransferase	NA	NA	NA	NA	NA
WP_002296407.1|1588202_1588571_-	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_002297404.1|1588977_1590228_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002295194.1|1590963_1592355_-	L-cystine transporter	NA	NA	NA	NA	NA
WP_002291995.1|1592567_1592954_-	DUF1149 family protein	NA	NA	NA	NA	NA
WP_002295196.1|1593009_1593633_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_002295197.1|1593696_1594365_-	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_002322028.1|1594376_1594817_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002295199.1|1594875_1595547_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_138556882.1|1596903_1597305_-|transposase	IS200/IS605 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.2	1.5e-50
>prophage 7
NZ_CP035654	Enterococcus faecium strain UAMSEF_08 chromosome, complete genome	2827987	1771286	1820956	2827987	protease,tRNA,transposase	Streptococcus_phage(42.86%)	51	NA	NA
WP_002347404.1|1771286_1771772_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_002326253.1|1771794_1772553_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	36.9	6.5e-26
WP_002322842.1|1772568_1773747_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	48.9	5.1e-102
WP_002326254.1|1773976_1776097_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	58.3	6.3e-220
WP_000122610.1|1776339_1777632_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	38.9	3.2e-57
WP_127817623.1|1779131_1779362_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296623.1|1779247_1780543_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
WP_002326255.1|1780861_1781587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288586.1|1781576_1782086_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288588.1|1782155_1783604_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.3	1.7e-19
WP_002293942.1|1783603_1784320_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.7	1.0e-33
WP_002288595.1|1784300_1784651_-	SdpI family protein	NA	NA	NA	NA	NA
WP_002293945.1|1784794_1785568_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_002293947.1|1786142_1786325_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085856162.1|1786409_1787363_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002323892.1|1787606_1787921_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321266.1|1788206_1788446_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060806716.1|1788807_1789068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289618.1|1789252_1789750_-	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_002289619.1|1789879_1790590_-	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_002297645.1|1790602_1792267_-	acetolactate synthase AlsS	NA	NA	NA	NA	NA
WP_002293954.1|1793157_1794027_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002293955.1|1794037_1794934_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002293956.1|1794986_1796246_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002293957.1|1796274_1796529_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002376800.1|1796512_1796671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288972.1|1796678_1796792_+|protease	CAAX amino protease	protease	NA	NA	NA	NA
WP_138556307.1|1798269_1798452_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002293958.1|1799929_1800172_-	DUF2087 domain-containing protein	NA	NA	NA	NA	NA
WP_002286913.1|1800481_1800829_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_002293717.1|1800964_1801726_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_002293716.1|1801715_1802237_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_002326259.1|1802406_1803198_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290277.1|1803321_1803573_-	KH domain-containing protein	NA	NA	NA	NA	NA
WP_002290274.1|1803584_1803860_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_002293714.1|1804112_1804667_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	29.3	2.3e-12
WP_002297192.1|1804745_1805267_-	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_002293710.1|1805270_1805849_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_002293709.1|1805960_1807379_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_002293708.1|1807399_1807738_-	putative DNA-binding protein	NA	NA	NA	NA	NA
WP_002297194.1|1807697_1808201_-	DUF523 domain-containing protein	NA	NA	NA	NA	NA
WP_002293705.1|1808331_1809036_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.2	1.4e-38
WP_002322835.1|1809032_1810769_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	34.1	9.3e-28
WP_002293701.1|1810871_1813346_-	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	29.2	1.7e-46
WP_002289807.1|1813671_1814562_-	phosphate ABC transporter substrate-binding protein PstS family protein	NA	NA	NA	NA	NA
WP_002293699.1|1814758_1815241_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289810.1|1815448_1815814_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002322761.1|1815904_1816222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101699735.1|1816587_1817749_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	50.9	7.8e-79
WP_002295271.1|1818321_1819296_-	choloylglycine hydrolase family protein	NA	M1HVK5	Paramecium_bursaria_Chlorella_virus	31.8	5.4e-25
WP_002297404.1|1819705_1820956_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
>prophage 8
NZ_CP035654	Enterococcus faecium strain UAMSEF_08 chromosome, complete genome	2827987	2068741	2074414	2827987	portal,capsid,tail,terminase,head	uncultured_Caudovirales_phage(50.0%)	7	NA	NA
WP_002296483.1|2068741_2069077_-|head	phage head closure protein	head	V5UQC7	Enterococcus_phage	35.6	4.7e-13
WP_002296484.1|2069063_2069348_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_002296485.1|2069403_2070927_-|capsid	phage major capsid protein	capsid	A0A1W6JPR8	Staphylococcus_phage	37.4	1.4e-48
WP_002296486.1|2070919_2072095_-|portal	phage portal protein	portal	A0A2H4J5A4	uncultured_Caudovirales_phage	35.6	3.2e-64
WP_002317249.1|2072098_2072284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296487.1|2072249_2073944_-|terminase	terminase large subunit	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	43.8	9.1e-129
WP_002296488.1|2073940_2074414_-|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
>prophage 9
NZ_CP035654	Enterococcus faecium strain UAMSEF_08 chromosome, complete genome	2827987	2669297	2725231	2827987	transposase,integrase	Streptococcus_phage(66.67%)	53	2675687:2675701	2724910:2724924
WP_086956687.1|2669297_2670460_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_002331276.1|2670500_2670746_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_002331275.1|2670844_2671159_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002331274.1|2671226_2671721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002331273.1|2671713_2672028_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321376.1|2672008_2672200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321375.1|2672243_2673635_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA	NA
WP_002321374.1|2673619_2674231_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_002322532.1|2674234_2674432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002340550.1|2674422_2677101_-	hypothetical protein	NA	NA	NA	NA	NA
2675687:2675701	attL	CCAGTTTTGCCAGCT	NA	NA	NA	NA
WP_023043245.1|2677087_2677306_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002340551.1|2677381_2678434_-	replication initiator protein A	NA	NA	NA	NA	NA
WP_002321715.1|2678586_2678913_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002319736.1|2678924_2679125_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002321714.1|2679199_2679850_+	helix-turn-helix transcriptional regulator	NA	Q20DG0	Lactobacillus_phage	33.3	3.2e-05
WP_002318021.1|2679904_2681071_+|integrase	site-specific integrase	integrase	A0A172LN96	Lactococcus_phage	34.0	3.3e-45
WP_070557977.1|2681487_2684715_+	fibrinogen-binding MSCRAMM adhesin Fss3	NA	NA	NA	NA	NA
WP_002297366.1|2684827_2685142_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	53.4	1.0e-25
WP_002297365.1|2685154_2685529_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	66.1	2.4e-34
WP_002311649.1|2685529_2685874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_130587595.1|2685956_2687297_+	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	65.0	1.5e-163
WP_002321810.1|2688280_2688715_+	DNA (cytosine-5-)-methyltransferase	NA	A0A1S5SDW2	Streptococcus_phage	77.1	6.5e-63
WP_002297356.1|2688715_2689423_+	DNA methylase	NA	A0A1S5SEK0	Streptococcus_phage	50.4	5.8e-53
WP_002297354.1|2689412_2689703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002297353.1|2689961_2691146_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	61.6	2.9e-142
WP_002317225.1|2691142_2691280_+	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_002286940.1|2692025_2693936_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	29.8	7.1e-37
WP_033658092.1|2694039_2694264_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	83.8	1.2e-23
WP_002297350.1|2694276_2694780_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	59.9	9.2e-53
WP_002297349.1|2694839_2695229_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	68.3	3.9e-43
WP_002297348.1|2695215_2697663_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.0	0.0e+00
WP_002297347.1|2697667_2699791_+	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	59.7	1.2e-181
WP_002297346.1|2699787_2700792_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	63.5	5.6e-118
WP_002297345.1|2700810_2701722_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	44.0	2.2e-65
WP_002297343.1|2702381_2702597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_130587592.1|2703358_2704798_-	MFS transporter	NA	NA	NA	NA	NA
WP_130587593.1|2705247_2706018_-	AP2 domain-containing protein	NA	A0A0C5K996	Enterococcus_phage	34.3	9.6e-09
WP_002297338.1|2706366_2707818_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A075BS18	Microcystis_phage	46.1	1.9e-18
WP_002297337.1|2707929_2709273_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_138556308.1|2709406_2715838_-	repetitive surface protein Esp	NA	NA	NA	NA	NA
WP_002332818.1|2716454_2716889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_130587557.1|2716905_2718111_-	YSIRK-targeted surface antigen transcriptional regulator	NA	NA	NA	NA	NA
WP_002302419.1|2718804_2719191_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_002302418.1|2719288_2719480_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_130587559.1|2720029_2720326_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002297332.1|2720235_2720430_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_002348989.1|2720468_2720615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_130587556.1|2720586_2720766_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_130587555.1|2721041_2722382_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	35.7	5.6e-65
WP_130587554.1|2722417_2722660_-	hypothetical protein	NA	NA	NA	NA	NA
WP_130587553.1|2722622_2724239_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_002317220.1|2724356_2724575_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_130587552.1|2724595_2725231_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.2	1.2e-17
2724910:2724924	attR	AGCTGGCAAAACTGG	NA	NA	NA	NA
>prophage 1
NZ_CP035655	Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence	256961	3393	177614	256961	transposase,holin,integrase,protease	Streptococcus_phage(26.19%)	159	61808:61867	130259:130397
WP_002287107.1|3393_4644_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002295673.1|5052_5292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002295672.1|5358_5568_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002336710.1|5627_6299_+	class A sortase	NA	NA	NA	NA	NA
WP_010729784.1|6351_8328_+	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_010729785.1|8340_9096_+	class C sortase	NA	NA	NA	NA	NA
WP_002350398.1|9092_9917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002343441.1|9926_10175_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025481135.1|10205_12317_+	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_138556309.1|12478_13774_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	36.9	1.5e-54
WP_130587577.1|13865_15923_-|protease	serine protease	protease	NA	NA	NA	NA
WP_002296354.1|16036_16249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296355.1|16435_16903_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002321279.1|16899_17142_+	DUF5415 family protein	NA	NA	NA	NA	NA
WP_002296358.1|17159_17462_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010729787.1|17533_19588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086322090.1|19587_22200_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_002302858.1|22196_24575_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002302857.1|24635_25178_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002302856.1|25255_25588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002302855.1|25588_26182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065305674.1|26203_27898_+	ATPase	NA	NA	NA	NA	NA
WP_002305175.1|28165_28399_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305177.1|28585_30463_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	26.3	9.1e-29
WP_002296365.1|30970_32176_+	peptidoglycan DD-metalloendopeptidase family protein	NA	Q6SEC2	Lactobacillus_prophage	42.4	2.5e-32
WP_002296371.1|32191_32836_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010729790.1|32846_33653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002313120.1|33674_33905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002325546.1|34450_34726_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002330592.1|34767_35190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002330591.1|35208_36801_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002330590.1|36812_37148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002330589.1|37294_37489_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138556918.1|37520_39893_+	hypothetical protein	NA	B5SP25	Lactococcus_phage	30.2	3.0e-13
WP_002313123.1|39953_41423_+	DUF3991 domain-containing protein	NA	NA	NA	NA	NA
WP_002303486.1|41433_43443_+	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	52.6	1.6e-111
WP_002301799.1|43411_43543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002299811.1|43788_44385_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_002301800.1|44397_45297_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_002301801.1|45299_45431_+	single-stranded DNA-binding protein	NA	A8ATZ7	Listeria_phage	83.3	1.3e-11
WP_002305808.1|45452_45785_+	single-stranded DNA-binding protein	NA	W6LM61	Streptococcus_phage	53.2	6.1e-21
WP_002295625.1|45806_46064_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002295624.1|46222_46345_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_074399798.1|46534_46759_+	hypothetical protein	NA	A0A0S2MYI8	Enterococcus_phage	56.9	3.6e-09
WP_002324499.1|47206_47413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287517.1|47412_47664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305049.1|47679_48117_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305050.1|48109_48805_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002324500.1|48969_49170_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305052.1|49644_50076_+	antitoxin HicB	NA	F0PIL2	Enterococcus_phage	64.9	4.3e-43
WP_002325884.1|50249_51203_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.1	1.3e-34
WP_002323715.1|51438_52713_+	MFS transporter	NA	NA	NA	NA	NA
WP_002361237.1|52766_54194_+	glycoside hydrolase family 32 protein	NA	S6ATV4	Bacillus_phage	26.8	3.1e-29
WP_002322785.1|54206_55079_+	ROK family protein	NA	NA	NA	NA	NA
WP_002305056.1|55173_56169_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_002305057.1|56258_56444_+	hypothetical protein	NA	F0PIL2	Enterococcus_phage	58.8	6.6e-09
WP_002323453.1|56851_57469_+	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	36.7	2.5e-15
WP_010729769.1|57626_58853_-|integrase	site-specific integrase	integrase	A0A097BYJ7	Leuconostoc_phage	24.2	3.2e-14
WP_071870188.1|58926_59094_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002328876.1|59640_60549_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_002328877.1|60605_61103_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002328878.1|61139_61835_-	HisJ family histidinol phosphate phosphatase	NA	NA	NA	NA	NA
61808:61867	attL	AATGTTCAGTATATTTTGATGAACGCATATGTAGTCCTCATTTCTTGGGAGTTTTGAGAC	NA	NA	NA	NA
WP_000997695.1|62134_63313_+|transposase	IS256-like element ISEf1 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	25.6	3.0e-30
WP_000202380.1|64097_65417_-|transposase	IS1380-like element IS1678 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	82.7	4.8e-210
WP_002328880.1|65704_66328_-	recombinase family protein	NA	M9Q1K0	Clostridium_phage	32.5	1.1e-15
WP_002328881.1|66645_66984_+	recombinase family protein	NA	NA	NA	NA	NA
WP_002333400.1|69049_69808_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_002290556.1|69812_70580_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_002290555.1|71068_71494_+	galactose-6-phosphate isomerase subunit LacA	NA	NA	NA	NA	NA
WP_002290554.1|71510_72026_+	galactose-6-phosphate isomerase subunit LacB	NA	A0A222YX14	Synechococcus_phage	36.0	3.3e-05
WP_002290553.1|72036_72969_+	tagatose-6-phosphate kinase	NA	NA	NA	NA	NA
WP_002290551.1|72971_73952_+	tagatose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_002290550.1|73979_74297_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002290549.1|74296_76003_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_002333401.1|76144_77551_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	29.4	1.6e-46
WP_002333402.1|77867_78767_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_002295345.1|80516_81026_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002329899.1|81476_81884_-	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A0N9SKD8	Staphylococcus_phage	38.9	4.0e-14
WP_002290351.1|81880_82114_-	addiction module antitoxin	NA	NA	NA	NA	NA
WP_002290352.1|82447_83533_+	tyrosine recombinase XerS	NA	NA	NA	NA	NA
WP_002290356.1|84635_84785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290357.1|84777_84987_-	DUF3173 domain-containing protein	NA	NA	NA	NA	NA
WP_002335326.1|86491_87952_-	sucrose phosphorylase	NA	NA	NA	NA	NA
WP_002342361.1|87948_89169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086322102.1|89229_91413_-	alpha-galactosidase	NA	NA	NA	NA	NA
WP_002290368.1|91452_92283_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002290370.1|92294_93167_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002290371.1|93176_94436_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_002329911.1|94583_95894_-	alpha-glucosidase/alpha-galactosidase	NA	NA	NA	NA	NA
WP_002350071.1|95925_96750_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002350067.1|97744_98854_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002338088.1|99147_100173_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_002290379.1|100417_101689_-	substrate-binding domain-containing protein	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	45.0	4.1e-17
WP_002290380.1|101972_102344_-	glyoxalase	NA	NA	NA	NA	NA
WP_002342357.1|102383_102920_-	glyoxalase	NA	NA	NA	NA	NA
WP_002290382.1|102931_103405_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	44.2	2.3e-13
WP_002290383.1|103577_104132_-|integrase	tyrosine-type recombinase/integrase	integrase	W8CYP1	Bacillus_phage	46.1	8.6e-36
WP_002300314.1|104604_105774_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_002319325.1|106793_107411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002311006.1|108475_108697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008271463.1|108794_109040_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002344895.1|110263_111265_-	DUF4062 domain-containing protein	NA	NA	NA	NA	NA
WP_002344896.1|111423_111690_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002344897.1|111679_112036_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_044383156.1|112327_113008_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	83.6	3.2e-109
WP_002292681.1|113637_114186_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002292680.1|114186_115044_-	ParA family protein	NA	F0PIG8	Enterococcus_phage	30.7	8.1e-33
WP_002300557.1|115328_115616_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002292678.1|115605_115935_-	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010729757.1|119199_120072_-	ROK family protein	NA	NA	NA	NA	NA
WP_002322556.1|120088_121561_-	glycoside hydrolase family 32 protein	NA	NA	NA	NA	NA
WP_002313079.1|121574_122423_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002322555.1|122419_123286_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002322554.1|123328_124687_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010729506.1|124781_125753_-	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	22.4	1.2e-05
WP_002313084.1|126787_127393_+	recombinase family protein	NA	A0A219YA40	Aeromonas_phage	32.6	3.6e-19
WP_002348862.1|128511_128721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002301399.1|128781_129741_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.5	5.0e-31
WP_010729754.1|130290_131199_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
130259:130397	attR	GTCTCAAAACTCCCAAGAAATGAGGACTACATATGCGTTCATCAAAATATACTGAACATTATACAGATACTTTTATAACATTCAAGGAAATTATGAGAACTGTTTCTAACATATACCACAATTGTGTACCAGATAAGAT	NA	NA	NA	NA
WP_010729753.1|131258_133061_-	exonuclease DNA polymerase III epsilon subunit	NA	A0A0A7RWA3	Clostridium_phage	30.4	7.6e-33
WP_002342384.1|133123_133966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002331328.1|133981_134203_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002336713.1|134698_135377_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	5.8e-127
WP_002339142.1|135435_136656_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	58.5	3.9e-57
WP_002339141.1|136675_137287_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	53.2	1.7e-56
WP_002350224.1|137329_138262_-	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_002350223.1|138682_139543_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002298077.1|140576_141977_-	putative basic amino acid antiporter YfcC	NA	NA	NA	NA	NA
WP_002288620.1|143758_145000_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_010729750.1|145035_145746_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002288615.1|145813_146629_-	fructoselysine 6-kinase	NA	NA	NA	NA	NA
WP_002336724.1|146639_147608_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_010729749.1|148370_149663_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
WP_002287659.1|149926_150280_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	38.7	5.7e-17
WP_002302440.1|152161_153463_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	33.6	1.6e-48
WP_002389879.1|153641_153911_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5SCV8	Streptococcus_phage	48.8	8.7e-18
WP_086322080.1|153900_154239_-	antitoxin	NA	NA	NA	NA	NA
WP_077974475.1|154235_154463_-	ADP-ribosylglycohydrolase family protein	NA	NA	NA	NA	NA
WP_010729807.1|154667_155300_-	HAD family phosphatase	NA	A0A1D8KNV9	Synechococcus_phage	27.9	3.0e-08
WP_010729806.1|155312_158036_-	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_002322451.1|158172_159138_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002298371.1|159191_160004_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_010729805.1|160017_160791_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002298375.1|160804_161275_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002298377.1|161271_161688_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002311511.1|162012_162855_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_002299197.1|165437_166049_+	VanZ family protein	NA	NA	NA	NA	NA
WP_002299198.1|166121_167051_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	23.3	1.1e-06
WP_074394709.1|167208_167946_+	TraM recognition domain-containing protein	NA	NA	NA	NA	NA
WP_010729801.1|167993_169172_-|transposase	IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	27.1	2.7e-23
WP_080114943.1|169398_169800_+	hypothetical protein	NA	A0A0N9S006	Staphylococcus_phage	49.2	2.5e-24
WP_002301682.1|171762_172572_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002301683.1|172571_173318_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002301684.1|173335_173803_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002301685.1|173802_174213_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002301686.1|174223_175237_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_010729798.1|175453_176188_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010729797.1|176171_176882_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010861579.1|176935_177614_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	98.7	2.9e-126
