The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040634	Acidipropionibacterium acidipropionici strain FAM 19036 chromosome, complete genome	3622795	2228561	2282918	3622795	integrase,capsid,portal,protease,transposase,head	Mycobacterium_phage(23.53%)	58	2223723:2223740	2270976:2270993
2223723:2223740	attL	AGCGCGTCGACGGCCTCG	NA	NA	NA	NA
WP_138573902.1|2228561_2229596_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_062820358.1|2229669_2230545_-	prenyltransferase	NA	NA	NA	NA	NA
WP_062820357.1|2230847_2231189_-	lycopene cyclase domain-containing protein	NA	NA	NA	NA	NA
WP_062820354.1|2235189_2235681_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_062820353.1|2235694_2236141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138573904.1|2236137_2238354_-	MMPL family transporter	NA	NA	NA	NA	NA
WP_062820351.1|2239991_2240441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573090.1|2240891_2242199_+|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	70.4	4.7e-173
WP_015069096.1|2244199_2245591_+|transposase	IS1380 family transposase	transposase	A0A222ZN33	Mycobacterium_phage	51.4	8.6e-117
WP_138573906.1|2247431_2248262_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573908.1|2248258_2249743_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_138573910.1|2249739_2250288_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573912.1|2250284_2252054_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_138573914.1|2252134_2252575_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_138575389.1|2252612_2253152_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573916.1|2253156_2253384_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573918.1|2255308_2256319_-|integrase	site-specific integrase	integrase	A0A2H4JG32	uncultured_Caudovirales_phage	34.9	7.5e-38
WP_138573920.1|2256318_2257116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138573922.1|2257171_2257582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138573924.1|2257647_2258373_+	RelA/SpoT domain-containing protein	NA	A0A1B0VBT5	Salmonella_phage	28.6	9.3e-14
WP_138573925.1|2258356_2258638_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573927.1|2258706_2259483_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_138575391.1|2259577_2259841_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_138573929.1|2259837_2260182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573931.1|2260178_2260400_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573933.1|2260396_2260696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573935.1|2260765_2261107_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_138573937.1|2261119_2261470_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573940.1|2261466_2261691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573942.1|2261687_2262509_+	hypothetical protein	NA	A0A0M5M766	Mycobacterium_phage	38.7	4.7e-38
WP_138573944.1|2262531_2263185_+	hypothetical protein	NA	A0A159B6R5	Tsukamurella_phage	34.8	3.5e-12
WP_138573946.1|2263260_2263467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573948.1|2263463_2263706_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573950.1|2263702_2264077_+	hypothetical protein	NA	A0A1D8ETG7	Propionibacterium_phage	62.1	7.6e-36
WP_138575393.1|2264121_2264358_+	DUF3310 domain-containing protein	NA	A0A222ZKJ3	Mycobacterium_phage	61.1	1.3e-17
WP_138573952.1|2264495_2265017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573954.1|2265013_2265265_+	hypothetical protein	NA	A0A142KBT4	Gordonia_phage	47.7	1.0e-12
WP_138573956.1|2265261_2265588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573958.1|2265793_2266111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573960.1|2266107_2266380_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573962.1|2266376_2266592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573964.1|2266659_2266881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573966.1|2267085_2267487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573968.1|2267483_2268932_+	DNA cytosine methyltransferase	NA	A0A1B3AYU4	Gordonia_phage	56.6	5.9e-161
WP_138573970.1|2268922_2271397_+	hypothetical protein	NA	A0A0K0N6F1	Gordonia_phage	46.7	7.3e-119
2270976:2270993	attR	AGCGCGTCGACGGCCTCG	NA	NA	NA	NA
WP_138573972.1|2271552_2272071_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573975.1|2272316_2273162_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138575395.1|2273791_2274136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573977.1|2274395_2274902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573979.1|2275058_2276450_+	hypothetical protein	NA	A0A1B3AZV7	Gordonia_phage	40.1	9.3e-79
WP_138573981.1|2276473_2278492_+|portal	phage portal protein	portal	A0A222ZGX5	Arthrobacter_phage	44.5	8.6e-142
WP_138573983.1|2278507_2279287_+|head,protease	HK97 family phage prohead protease	head,protease	A0A222ZEN8	Arthrobacter_phage	52.2	2.2e-53
WP_138573985.1|2279319_2280543_+|capsid	phage major capsid protein	capsid	A0A0U4K7R9	Arthrobacter_phage	51.0	2.5e-96
WP_138573987.1|2280716_2281232_+	hypothetical protein	NA	A0A222ZFS8	Arthrobacter_phage	32.3	1.4e-08
WP_138573989.1|2281228_2281567_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573991.1|2281571_2281838_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573993.1|2281834_2282212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138573995.1|2282261_2282918_+	hypothetical protein	NA	A0A2H4J3T5	uncultured_Caudovirales_phage	28.9	1.2e-15
>prophage 2
NZ_CP040634	Acidipropionibacterium acidipropionici strain FAM 19036 chromosome, complete genome	3622795	2924685	2959448	3622795	transposase	Corynebacterium_phage(16.67%)	21	NA	NA
WP_138574646.1|2924685_2926017_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	76.3	9.8e-195
WP_138574648.1|2925798_2926623_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	48.4	7.5e-36
WP_138574650.1|2926823_2927171_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_008598604.1|2927283_2927706_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA	NA
WP_028701538.1|2927734_2929495_+	arsenical pump-driving ATPase	NA	NA	NA	NA	NA
WP_138574652.1|2929568_2930384_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	34.5	1.6e-33
WP_015069156.1|2932219_2932705_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_097798981.1|2933003_2934191_+	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	33.6	1.6e-31
WP_028701534.1|2934279_2936265_+	amino acid decarboxylase	NA	NA	NA	NA	NA
WP_138574654.1|2936276_2937986_+	Y4yA family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_041707659.1|2938346_2939606_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	41.9	9.3e-78
WP_015069150.1|2940110_2943179_+	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	32.7	3.6e-139
WP_015069149.1|2943201_2944590_+	MFS transporter	NA	NA	NA	NA	NA
WP_015069148.1|2944635_2945631_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	33.2	2.7e-40
WP_036938199.1|2947149_2948568_+|transposase	IS30-like element ISPfr9 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.9	1.0e-32
WP_028701541.1|2948717_2950073_+	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	42.6	6.0e-91
WP_138574656.1|2950461_2951672_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	34.4	2.5e-35
WP_138574658.1|2951803_2956684_-	DEAD/DEAH box helicase	NA	A0A1X7QFZ4	Faustovirus	25.1	6.9e-28
WP_071161959.1|2956751_2957036_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138574660.1|2957032_2957338_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_060539093.1|2958188_2959448_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	41.9	1.6e-77
>prophage 3
NZ_CP040634	Acidipropionibacterium acidipropionici strain FAM 19036 chromosome, complete genome	3622795	3223530	3232426	3622795		Brucella_phage(33.33%)	9	NA	NA
WP_138574879.1|3223530_3225333_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.7	2.7e-30
WP_062819836.1|3225844_3227287_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	28.6	3.0e-32
WP_138574881.1|3227836_3229048_+	RtcB family protein	NA	A0A1I9SAD2	Rhodococcus_phage	51.8	2.4e-107
WP_082815999.1|3229245_3229482_+	addiction module killer protein	NA	A0A141GEX6	Brucella_phage	52.3	1.8e-14
WP_015068916.1|3229478_3229781_+	putative addiction module antidote protein	NA	A0A141GEX5	Brucella_phage	41.9	3.7e-09
WP_062819833.1|3229869_3230169_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_138574884.1|3230165_3230516_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_015068914.1|3230652_3231312_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_051281955.1|3231769_3232426_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.3e-34
