assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_005890155.1_ASM589015v1	NZ_CP040634	Acidipropionibacterium acidipropionici strain FAM 19036 chromosome, complete genome	1	1161799-1161906	1	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas3,DinG	Orphan	CGCCAGGGGGTGCAGGGGGGTTGCCCCCC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,DinG	NA,NA|174aa|down_5|NZ_CP040634.1_1165579_1166101_-,NA|101aa|down_7|NZ_CP040634.1_1166916_1167219_-	NA|300aa|up_9|NZ_CP040634.1_1145408_1146308_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|353aa|up_8|NZ_CP040634.1_1146319_1147378_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|633aa|up_7|NZ_CP040634.1_1147418_1149317_-	COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown]	NA|273aa|up_6|NZ_CP040634.1_1149325_1150144_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|338aa|up_5|NZ_CP040634.1_1152558_1153572_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|239aa|up_4|NZ_CP040634.1_1155419_1156136_+	PRK06557, PRK06557, L-ribulose-5-phosphate 4-epimerase; Validated	NA|504aa|up_3|NZ_CP040634.1_1156195_1157707_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|338aa|up_2|NZ_CP040634.1_1157832_1158846_+	cd01574, PBP1_LacI, ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators	NA|451aa|up_1|NZ_CP040634.1_1159145_1160498_+	PRK07906, PRK07906, hypothetical protein; Provisional	NA|432aa|up_0|NZ_CP040634.1_1160502_1161798_+	cd06114, EcCS_like, Escherichia coli (Ec) citrate synthase (CS) GltA_like	NA|320aa|down_0|NZ_CP040634.1_1161908_1162868_-	COG0667, Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion]	NA|194aa|down_1|NZ_CP040634.1_1162949_1163531_+	pfam11290, DUF3090, Protein of unknown function (DUF3090)	NA|225aa|down_2|NZ_CP040634.1_1163660_1164335_+	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|89aa|down_3|NZ_CP040634.1_1164392_1164659_+	cd11547, NTP-PPase_HisE, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|287aa|down_4|NZ_CP040634.1_1164670_1165531_+	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed	NA|174aa|down_5|NZ_CP040634.1_1165579_1166101_-	NA	NA|161aa|down_6|NZ_CP040634.1_1166137_1166620_+	pfam07179, SseB, SseB protein N-terminal domain	NA|101aa|down_7|NZ_CP040634.1_1166916_1167219_-	NA	NA|236aa|down_8|NZ_CP040634.1_1173044_1173752_+	PRK11788, PRK11788, tetratricopeptide repeat protein; Provisional	NA|333aa|down_9|NZ_CP040634.1_1173744_1174743_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase
GCF_005890155.1_ASM589015v1	NZ_CP040634	Acidipropionibacterium acidipropionici strain FAM 19036 chromosome, complete genome	2	2092505-2092645	2	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas3,DinG	Orphan	ACTCTGTATTCCCGCATGCTTGACGGCAGGGGGTCAGCGAGCGC	44	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,DinG	NA,NA|138aa|down_1|NZ_CP040634.1_2093323_2093737_-,NA|62aa|down_7|NZ_CP040634.1_2100000_2100186_+	NA|729aa|up_9|NZ_CP040634.1_2078581_2080768_-	PRK09426, PRK09426, methylmalonyl-CoA mutase; Reviewed	NA|636aa|up_8|NZ_CP040634.1_2080764_2082672_-	TIGR00642, mmCoA_mut_beta, methylmalonyl-CoA mutase, heterodimeric type, beta chain	NA|318aa|up_7|NZ_CP040634.1_2083105_2084059_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|417aa|up_6|NZ_CP040634.1_2085331_2086582_-	cd11354, AmyAc_bac_CMD_like, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins	NA|463aa|up_5|NZ_CP040634.1_2086627_2088016_-	COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism]	NA|168aa|up_4|NZ_CP040634.1_2088264_2088768_-	PRK00522, tpx, thiol peroxidase	NA|324aa|up_3|NZ_CP040634.1_2088881_2089853_-	cd19081, AKR_AKR9C1, AKR9C family of aldo-keto reductase (AKR)	NA|399aa|up_2|NZ_CP040634.1_2089943_2091140_-	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|173aa|up_1|NZ_CP040634.1_2091203_2091722_-	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism]	NA|214aa|up_0|NZ_CP040634.1_2091779_2092421_-	cd02430, PTH2, Peptidyl-tRNA hydrolase, type 2 (PTH2)	NA|208aa|down_0|NZ_CP040634.1_2092689_2093313_+	cd07523, HAD_YsbA-like, uncharacterized family of the haloacid dehalogenase-like superfamily, similar to the uncharacterized Lactococcus lactis YsbA	NA|138aa|down_1|NZ_CP040634.1_2093323_2093737_-	NA	NA|262aa|down_2|NZ_CP040634.1_2093815_2094601_-	smart00880, CHAD, The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family	NA|501aa|down_3|NZ_CP040634.1_2094620_2096123_-	cd17366, MFS_ProP, Proline/betaine transporter of the Major Facilitator Superfamily of transporters	NA|504aa|down_4|NZ_CP040634.1_2096268_2097780_-	PRK10642, PRK10642, proline/glycine betaine transporter ProP	NA|328aa|down_5|NZ_CP040634.1_2098190_2099174_+	cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|236aa|down_6|NZ_CP040634.1_2099179_2099887_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|62aa|down_7|NZ_CP040634.1_2100000_2100186_+	NA	NA|393aa|down_8|NZ_CP040634.1_2100291_2101470_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|470aa|down_9|NZ_CP040634.1_2101805_2103215_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein
GCF_005890155.1_ASM589015v1	NZ_CP040634	Acidipropionibacterium acidipropionici strain FAM 19036 chromosome, complete genome	3	2651456-2651560	3	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas3,DinG	Orphan	CCCCTCCACGCTCGCGCAGGCGCTCGCTTCCTCCCCGAAC	40	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,DinG	NA,NA|119aa|down_2|NZ_CP040634.1_2655198_2655555_-,NA|314aa|down_9|NZ_CP040634.1_2663592_2664534_-	NA|273aa|up_9|NZ_CP040634.1_2639532_2640351_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|268aa|up_8|NZ_CP040634.1_2640350_2641154_-	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|553aa|up_7|NZ_CP040634.1_2641310_2642969_+	pfam06738, ThrE, Putative threonine/serine exporter	NA|914aa|up_6|NZ_CP040634.1_2642843_2645585_-	pfam02687, FtsX, FtsX-like permease family	NA|260aa|up_5|NZ_CP040634.1_2645584_2646364_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|209aa|up_4|NZ_CP040634.1_2646360_2646987_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|611aa|up_3|NZ_CP040634.1_2647141_2648974_+	pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35	NA|408aa|up_2|NZ_CP040634.1_2649118_2650342_+	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters	NA|105aa|up_1|NZ_CP040634.1_2650378_2650693_-	pfam01910, Thiamine_BP, Thiamine-binding protein	NA|207aa|up_0|NZ_CP040634.1_2650751_2651372_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|110aa|down_0|NZ_CP040634.1_2651615_2651945_-	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family	NA|974aa|down_1|NZ_CP040634.1_2652044_2654966_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|119aa|down_2|NZ_CP040634.1_2655198_2655555_-	NA	NA|121aa|down_3|NZ_CP040634.1_2655827_2656190_+	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|262aa|down_4|NZ_CP040634.1_2656431_2657217_+	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|458aa|down_5|NZ_CP040634.1_2657206_2658580_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|539aa|down_6|NZ_CP040634.1_2658610_2660227_-	COG3559, TnrB3, Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]	NA|329aa|down_7|NZ_CP040634.1_2660223_2661210_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|257aa|down_8|NZ_CP040634.1_2661202_2661973_-	pfam17933, TetR_C_25, Tetracyclin repressor-like, C-terminal domain	NA|314aa|down_9|NZ_CP040634.1_2663592_2664534_-	NA
GCF_005890155.1_ASM589015v1	NZ_CP040634	Acidipropionibacterium acidipropionici strain FAM 19036 chromosome, complete genome	4	2813355-2813493	4	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas3,DinG	Orphan	CACCCGCAACGCGTGGCCACGGGTGCCGACCCACCTCCCACGGACCCGACCG	52	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,DinG	NA|107aa|up_3|NZ_CP040634.1_2811084_2811405_+,NA|179aa|up_0|NZ_CP040634.1_2812706_2813243_-,NA|82aa|down_5|NZ_CP040634.1_2820557_2820803_+,NA|155aa|down_6|NZ_CP040634.1_2820787_2821252_-,NA|170aa|down_7|NZ_CP040634.1_2821293_2821803_+	NA|468aa|up_9|NZ_CP040634.1_2805948_2807352_-	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|106aa|up_8|NZ_CP040634.1_2807508_2807826_-	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|337aa|up_7|NZ_CP040634.1_2807867_2808878_-	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|172aa|up_6|NZ_CP040634.1_2808916_2809432_-	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]	NA|170aa|up_5|NZ_CP040634.1_2809446_2809956_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|334aa|up_4|NZ_CP040634.1_2810059_2811061_+	cd08252, AL_MDR, Arginate lyase and other MDR family members	NA|107aa|up_3|NZ_CP040634.1_2811084_2811405_+	NA	NA|163aa|up_2|NZ_CP040634.1_2811520_2812009_-	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase	NA|206aa|up_1|NZ_CP040634.1_2812057_2812675_+	PRK00802, PRK00802, DNA-3-methyladenine glycosylase	NA|179aa|up_0|NZ_CP040634.1_2812706_2813243_-	NA	NA|392aa|down_0|NZ_CP040634.1_2813539_2814715_-	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins	NA|849aa|down_1|NZ_CP040634.1_2814818_2817365_-	TIGR01970, ATP-dependent_RNA_helicase_HrpB, ATP-dependent helicase HrpB	NA|205aa|down_2|NZ_CP040634.1_2817361_2817976_-	cd03674, Nudix_Hydrolase_1, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|450aa|down_3|NZ_CP040634.1_2818106_2819456_+	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|277aa|down_4|NZ_CP040634.1_2819596_2820427_-	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|82aa|down_5|NZ_CP040634.1_2820557_2820803_+	NA	NA|155aa|down_6|NZ_CP040634.1_2820787_2821252_-	NA	NA|170aa|down_7|NZ_CP040634.1_2821293_2821803_+	NA	NA|204aa|down_8|NZ_CP040634.1_2821799_2822411_+	cd17792, CtkA, serine/threonine-protein kinase CtkA and similar proteins	NA|273aa|down_9|NZ_CP040634.1_2822373_2823192_+	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p
GCF_005890155.1_ASM589015v1	NZ_CP040634	Acidipropionibacterium acidipropionici strain FAM 19036 chromosome, complete genome	5	2938096-2938173	5	CRISPRCasFinder	no	csa3	csa3,DEDDh,WYL,cas3,DinG	Type I-A	GGCGGCACGCGACCAGCTGACGGCG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,DinG	NA,NA|95aa|down_8|NZ_CP040634.1_2956751_2957036_+	NA|444aa|up_9|NZ_CP040634.1_2924685_2926017_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|275aa|up_8|NZ_CP040634.1_2925798_2926623_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	csa3|116aa|up_7|NZ_CP040634.1_2926823_2927171_-	COG0640, ArsR, Predicted transcriptional regulators [Transcription]	NA|141aa|up_6|NZ_CP040634.1_2927283_2927706_+	pfam06953, ArsD, Arsenical resistance operon trans-acting repressor ArsD	NA|587aa|up_5|NZ_CP040634.1_2927734_2929495_+	TIGR04291, Arsenical_pump-driving_ATPase, arsenical pump-driving ATPase	NA|272aa|up_4|NZ_CP040634.1_2929568_2930384_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|162aa|up_3|NZ_CP040634.1_2932219_2932705_-	pfam16242, Pyrid_ox_like, Pyridoxamine 5'-phosphate oxidase like	NA|396aa|up_2|NZ_CP040634.1_2933003_2934191_+	TIGR03945, cysteine_synthase, 2,3-diaminopropionate biosynthesis protein SbnA	NA|662aa|up_1|NZ_CP040634.1_2934279_2936265_+	pfam13454, NAD_binding_9, FAD-NAD(P)-binding	NA|570aa|up_0|NZ_CP040634.1_2936276_2937986_+	cd06842, PLPDE_III_Y4yA_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Y4yA	NA|420aa|down_0|NZ_CP040634.1_2938346_2939606_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|1023aa|down_1|NZ_CP040634.1_2940110_2943179_+	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed	NA|463aa|down_2|NZ_CP040634.1_2943201_2944590_+	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]	NA|332aa|down_3|NZ_CP040634.1_2944635_2945631_+	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs	NA|473aa|down_4|NZ_CP040634.1_2947149_2948568_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|452aa|down_5|NZ_CP040634.1_2948717_2950073_+	PRK07251, PRK07251, FAD-containing oxidoreductase	NA|404aa|down_6|NZ_CP040634.1_2950461_2951672_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|1627aa|down_7|NZ_CP040634.1_2951803_2956684_-	COG4889, COG4889, Predicted helicase [General function prediction only]	NA|95aa|down_8|NZ_CP040634.1_2956751_2957036_+	NA	NA|102aa|down_9|NZ_CP040634.1_2957032_2957338_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family
