The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040667	Escherichia coli strain S17-1 chromosome, complete genome	4772290	554796	561935	4772290		Escherichia_phage(83.33%)	6	NA	NA
WP_001278994.1|554796_555435_-	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
WP_001393459.1|555526_556693_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	60.6	1.1e-120
WP_000848004.1|556689_557598_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	4.3e-117
WP_001300386.1|557793_558561_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.3	7.4e-70
WP_001141337.1|558611_559268_-	protein-serine/threonine phosphatase	NA	A0A222YWF0	Escherichia_phage	46.3	4.7e-49
WP_001272928.1|559373_561935_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	3.0e-30
>prophage 2
NZ_CP040667	Escherichia coli strain S17-1 chromosome, complete genome	4772290	936341	947551	4772290	integrase,tail	Enterobacteria_phage(50.0%)	17	932651:932667	949561:949577
932651:932667	attL	GGTTGTCGATACCAATA	NA	NA	NA	NA
WP_001163428.1|936341_936542_-	response regulator inhibitor TorI	NA	K7P7V0	Enterobacteria_phage	100.0	2.4e-33
WP_000206809.1|936673_936979_-	hypothetical protein	NA	U5P0J0	Shigella_phage	96.0	2.2e-49
WP_001242717.1|936978_937341_-	phage protein	NA	K7PH61	Enterobacteria_phage	99.1	2.0e-65
WP_000008183.1|937331_937868_-	5'-deoxynucleotidase	NA	K7PKJ9	Enterobacteria_phage	98.9	3.7e-100
WP_000081278.1|937995_938820_-	YfdQ family protein	NA	K7PJQ6	Enterobacteria_phage	99.3	7.8e-150
WP_000135673.1|938885_939248_-	hypothetical protein	NA	Q8SBF8	Shigella_phage	99.2	1.9e-60
WP_000128175.1|939605_939974_+	hypothetical protein	NA	U5P0A0	Shigella_phage	99.2	1.3e-69
WP_001393497.1|939970_940465_+	PerC family transcriptional regulator	NA	A0A0P0ZCF0	Stx2-converting_phage	98.1	1.2e-86
WP_000066913.1|940464_940740_+	phage N-6-adenine-methyltransferase	NA	Q8SBE9	Shigella_phage	100.0	2.6e-49
WP_011443597.1|940789_941308_+	hypothetical protein	NA	M1FN94	Enterobacteria_phage	68.8	4.6e-39
WP_001106835.1|941334_941775_+|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	70.1	9.5e-54
WP_047792215.1|942073_942355_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001030215.1|942389_943721_-	hypothetical protein	NA	U5P0I5	Shigella_phage	36.7	6.8e-63
WP_000703651.1|943717_944638_-	glycosyltransferase family 2 protein	NA	M1FQW5	Enterobacteria_phage	89.9	4.2e-160
WP_000915541.1|944634_944997_-	GtrA family protein	NA	U5P0S6	Shigella_phage	88.3	1.0e-53
WP_000958671.1|945149_946307_-|integrase	prophage integrase IntS	integrase	A5VW56	Enterobacteria_phage	100.0	5.7e-223
WP_000368140.1|946618_947551_-	formate/nitrite transporter family protein	NA	E7DYY8	Enterobacteria_phage	99.0	2.5e-165
949561:949577	attR	GGTTGTCGATACCAATA	NA	NA	NA	NA
>prophage 3
NZ_CP040667	Escherichia coli strain S17-1 chromosome, complete genome	4772290	1767068	1786279	4772290	lysis,tail	Enterobacteria_phage(40.91%)	35	NA	NA
WP_000379575.1|1767068_1767224_-	DUF1391 family protein	NA	M4QQ57	Salicola_phage	53.2	3.0e-07
WP_000448564.1|1767390_1767798_-	DNA-binding transcriptional dual regulator DicA	NA	K7PM82	Enterobacteria_phage	54.7	4.4e-13
WP_000920568.1|1767881_1768112_+	dicB transcriptional regulator DicC	NA	NA	NA	NA	NA
WP_011443592.1|1768408_1768558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001301033.1|1768994_1769327_-	protein FlxA	NA	NA	NA	NA	NA
WP_001326990.1|1769529_1769835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000534858.1|1769859_1770099_+	type II toxin-antitoxin system antitoxin RelB	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	54.4	1.6e-18
WP_000323025.1|1770098_1770386_+	type II toxin-antitoxin system mRNA interferase RelE	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	66.0	1.4e-29
WP_000813254.1|1770457_1770613_+	type I toxin-antitoxin system toxin HokD	NA	A0A0U2QV81	Escherichia_phage	96.1	1.5e-17
WP_000980994.1|1770829_1771081_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012304870.1|1771147_1771426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001265198.1|1771427_1772477_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	57.3	1.3e-112
WP_001047135.1|1772490_1773243_+	antitermination protein	NA	A0A192Y5X6	Salmonella_phage	92.8	7.1e-134
WP_120795389.1|1773520_1773610_-	Qin prophage; protein YnfS	NA	NA	NA	NA	NA
WP_000087756.1|1773664_1773877_-	cold shock-like protein CspF	NA	NA	NA	NA	NA
WP_000066484.1|1774177_1774393_+	cold shock-like protein CspB	NA	A0A1W6JNX5	Morganella_phage	76.5	3.4e-25
WP_000839590.1|1775146_1775362_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	94.4	1.1e-31
WP_000189916.1|1775366_1775678_+	YdfR family protein	NA	K7PGU6	Enterobacteria_phage	64.6	2.0e-26
WP_001092971.1|1775674_1776208_+	lysozyme	NA	K7PLY1	Enterobacteria_phage	93.2	6.4e-97
WP_001071769.1|1776204_1776702_+	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	29.5	2.9e-06
WP_000066495.1|1777064_1777277_+	cold shock protein CspI	NA	A0A1W6JNX5	Morganella_phage	74.3	1.2e-22
WP_071524604.1|1777287_1777476_+	cold-shock protein	NA	NA	NA	NA	NA
WP_120795388.1|1777478_1777544_+	Qin prophage; protein YnfR	NA	NA	NA	NA	NA
WP_001309517.1|1777622_1777778_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001019606.1|1777949_1778123_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
WP_000373090.1|1778274_1778685_-	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	79.4	2.5e-56
WP_001368374.1|1778742_1778976_-	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	84.1	2.5e-21
WP_000453612.1|1779364_1779934_+	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.3	1.5e-91
WP_001027733.1|1779884_1780847_+|tail	tail fiber protein	tail	K7PHC9	Enterobacteria_phage	70.9	4.1e-41
WP_000885611.1|1780846_1781422_+|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	95.3	6.5e-103
WP_000078177.1|1781519_1782110_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_000836768.1|1782426_1782660_-	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
WP_120795384.1|1782728_1782842_-	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000347482.1|1783446_1784730_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_000527743.1|1784818_1786279_+	mannitol dehydrogenase family protein	NA	H8ZJP8	Ostreococcus_tauri_virus	29.6	4.3e-42
>prophage 4
NZ_CP040667	Escherichia coli strain S17-1 chromosome, complete genome	4772290	1945222	2009169	4772290	integrase,tRNA,transposase,lysis,tail	Escherichia_phage(39.39%)	63	1988117:1988135	2016141:2016159
WP_001254932.1|1945222_1946374_-|transposase	IS30-like element IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.6	2.0e-42
WP_085947917.1|1946537_1947810_+|transposase	IS3-like element IS2 family transposase	transposase	Q9ZXG3	Shigella_phage	99.3	1.4e-177
WP_010723099.1|1950501_1950567_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001123464.1|1950670_1951261_-	phenylacetic acid degradation protein PaaY	NA	NA	NA	NA	NA
WP_000039887.1|1951242_1952193_-	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_000632280.1|1952293_1953607_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_001206197.1|1953633_1954839_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_000018413.1|1954838_1955261_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_000973360.1|1955250_1956678_-	3-hydroxyacyl-CoA dehydrogenase PaaC	NA	NA	NA	NA	NA
WP_000969784.1|1956679_1957468_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_001292353.1|1957467_1958235_-	2,3-dehydroadipyl-CoA hydratase	NA	NA	NA	NA	NA
WP_000206388.1|1958231_1959302_-	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	NA	NA	NA	NA
WP_001189201.1|1959309_1959807_-	phenylacetate degradation protein PaaD	NA	NA	NA	NA	NA
WP_001072837.1|1959821_1960568_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_000073393.1|1960576_1960864_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_001112359.1|1960875_1961739_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_001186469.1|1962089_1964135_+	phenylacetic acid degradation bifunctional protein PaaZ	NA	NA	NA	NA	NA
WP_000535469.1|1964382_1966656_+	primary-amine oxidase	NA	NA	NA	NA	NA
WP_000138615.1|1966713_1968213_-	phenylacetaldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001067514.1|1968448_1969354_+	transcriptional regulator FeaR	NA	NA	NA	NA	NA
WP_001300734.1|1969525_1969852_-	YdbL family protein	NA	NA	NA	NA	NA
WP_000698145.1|1969859_1970045_-	YnbE family lipoprotein	NA	NA	NA	NA	NA
WP_000900941.1|1970041_1972681_-	YdbH family protein	NA	NA	NA	NA	NA
WP_000762236.1|1972888_1973878_+	D-lactate dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	44.0	1.5e-70
WP_001298828.1|1973988_1974411_+	heat shock protein HslJ	NA	NA	NA	NA	NA
WP_001295715.1|1974407_1974674_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
WP_000628244.1|1974947_1978472_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA	NA
WP_000837921.1|1978838_1979972_+	porin OmpN	NA	Q1MVN1	Enterobacteria_phage	58.5	1.1e-117
WP_001300461.1|1980112_1980547_+	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.8	1.8e-28
WP_120795384.1|1981325_1981439_+	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000836770.1|1981507_1981741_+	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	87.0	5.4e-32
WP_000086527.1|1982057_1982648_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_001698950.1|1982745_1983321_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	94.8	2.5e-102
WP_000279097.1|1983320_1986683_-|tail	side tail fiber protein	tail	X2KTY7	Enterobacteria_phage	36.4	8.1e-12
WP_089418980.1|1986747_1986963_-	Ail/Lom family outer membrane beta-barrel protein	NA	Q687E7	Enterobacteria_phage	98.4	1.4e-29
WP_000019448.1|1987005_1987986_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.1	8.9e-185
1988117:1988135	attL	GCTTATTCGCACCTTCCCT	NA	NA	NA	NA
WP_001755909.1|1989443_1989644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000091628.1|1989751_1990111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001350510.1|1990091_1990355_-	ParB N-terminal domain-containing protein	NA	A0A0R6PD10	Moraxella_phage	56.1	6.3e-21
WP_001097895.1|1990492_1991950_-	Trk system potassium uptake protein TrkG	NA	NA	NA	NA	NA
WP_001228696.1|1992146_1992332_-|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.2	2.8e-15
WP_000450663.1|1992419_1992980_-	DUF1627 domain-containing protein	NA	A0A0U2SAW4	Escherichia_phage	88.1	1.9e-67
WP_000788970.1|1993002_1993749_-	ATP-binding protein	NA	V5UQI5	Shigella_phage	78.9	3.8e-111
WP_000899748.1|1993755_1994613_-	DUF1376 domain-containing protein	NA	A0A0U2RT81	Escherichia_phage	84.5	8.3e-70
WP_000693797.1|1994625_1995048_-	phage protein	NA	A0A0U2RXZ9	Escherichia_phage	95.0	1.5e-69
WP_000712069.1|1995070_1995367_-	toxin YdaS	NA	A0A0R6PH31	Moraxella_phage	44.9	9.6e-10
WP_000948459.1|1995490_1995967_+	DNA-binding transcriptional repressor RacR	NA	A0A2D1GNH0	Pseudomonas_phage	53.4	2.2e-11
WP_000233809.1|1996275_1996410_+	phage protein	NA	NA	NA	NA	NA
WP_001169151.1|1996420_1996576_+	YdaF family protein	NA	M4QQ57	Salicola_phage	55.3	6.1e-08
WP_001312793.1|1996572_1997061_-	superinfection exclusion protein B	NA	NA	NA	NA	NA
WP_000560225.1|1997502_1997724_+	killing protein KilR	NA	A0A0U2RTC4	Escherichia_phage	97.3	4.9e-35
WP_001352098.1|1997723_1997894_+	conserved protein, Rac prophage	NA	A0A0U2SHB5	Escherichia_phage	71.4	3.6e-17
WP_000632297.1|1997968_1998244_+	protein RacC	NA	A0A0U2QW85	Escherichia_phage	96.7	1.4e-42
WP_000105143.1|1998345_2000946_+	exodeoxyribonuclease VIII	NA	A0A0U2I1R6	Escherichia_phage	63.5	5.1e-248
WP_000166319.1|2000938_2001748_+	recombination protein RecT	NA	A0A1P8DTF2	Proteus_phage	71.5	8.8e-106
WP_001317028.1|2001804_2001999_+	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	NA	A0A0U2QQP4	Escherichia_phage	96.9	5.8e-32
WP_000276809.1|2001991_2002201_+	double-strand break reduction protein RcbA	NA	A0A0U2QL97	Escherichia_phage	98.4	6.1e-27
WP_000079604.1|2002279_2002495_+	excisionase XisR	NA	A0A0U2RY08	Escherichia_phage	100.0	1.8e-37
WP_000040852.1|2002496_2003732_+|integrase	site-specific integrase	integrase	A0A0U2JGI6	Escherichia_phage	98.8	5.5e-240
WP_001157406.1|2003783_2004719_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	98.8	5.9e-146
WP_000123737.1|2004847_2006221_-	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.1	6.6e-53
WP_000387388.1|2006698_2007682_-	zinc transporter ZntB	NA	NA	NA	NA	NA
WP_000628058.1|2007936_2009169_+	diguanylate cyclase DgcM	NA	A0A127AWB9	Bacillus_phage	39.5	3.1e-17
2016141:2016159	attR	AGGGAAGGTGCGAATAAGC	NA	NA	NA	NA
>prophage 5
NZ_CP040667	Escherichia coli strain S17-1 chromosome, complete genome	4772290	2197587	2212971	4772290	portal,transposase,tail,plate	Shigella_phage(33.33%)	24	NA	NA
WP_000332303.1|2197587_2198319_+	DNA-binding transcriptional repressor BluR	NA	Q9EYF2	Enterobacteria_phage	50.5	2.7e-53
WP_000373101.1|2198539_2198944_+	DUF1398 domain-containing protein	NA	NA	NA	NA	NA
WP_032082692.1|2198996_2199107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001295666.1|2199643_2199967_+	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	65.4	3.0e-41
WP_000943927.1|2200069_2200234_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	96.3	4.2e-23
WP_000557907.1|2200467_2201301_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_000905001.1|2201407_2201962_-	site-specific DNA recombinase	NA	A0A1S6L009	Salmonella_phage	88.3	2.8e-87
WP_010723096.1|2202370_2202784_+|tail	tail assembly chaperone	tail	A0A0F7LDZ0	Escherichia_phage	53.6	7.1e-27
WP_000548498.1|2202755_2203358_-|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	83.5	9.2e-92
WP_000554707.1|2203357_2204146_-|tail	tail fiber protein	tail	U5P0I1	Shigella_phage	94.4	2.7e-51
WP_000383574.1|2204149_2204734_-	YmfQ family protein	NA	O22003	Shigella_phage	98.5	2.0e-112
WP_001350503.1|2204724_2205516_-|plate	baseplate J/gp47 family protein	plate	M1FQW3	Enterobacteria_phage	97.3	4.7e-144
WP_001350502.1|2205442_2205916_-|portal	phage portal protein	portal	A0A1B5FP95	Escherichia_phage	100.0	3.6e-75
WP_000605606.1|2205915_2206098_-	hypothetical protein	NA	S5FXQ9	Shigella_phage	100.0	1.7e-25
WP_000104929.1|2206109_2207477_-	GntR family transcriptional regulator	NA	A0A1C9IIA1	Salmonella_phage	99.2	5.1e-223
WP_001250269.1|2207466_2207646_-	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	68.5	7.8e-15
WP_000515837.1|2207821_2208379_-	protein YmfL	NA	S5FXP0	Shigella_phage	95.7	7.4e-96
WP_000649480.1|2208422_2208623_-	transcriptional regulator	NA	U5P445	Shigella_phage	98.5	1.9e-30
WP_000848748.1|2208713_2209388_+	LexA family transcriptional repressor	NA	U5P0T5	Shigella_phage	100.0	1.2e-132
WP_001005353.1|2209562_2209871_+	hypothetical protein	NA	I6PDF6	Cronobacter_phage	80.0	3.8e-09
WP_010723095.1|2209808_2210150_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011443584.1|2210266_2210578_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000939945.1|2210614_2210860_+	excisionase-like protein from lambdoid prophage 14	NA	NA	NA	NA	NA
WP_085947771.1|2211808_2212971_-|transposase	IS3-like element IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	3.1e-51
>prophage 6
NZ_CP040667	Escherichia coli strain S17-1 chromosome, complete genome	4772290	2803730	2836769	4772290	transposase,lysis,capsid,terminase,protease	Enterobacteria_phage(53.85%)	32	NA	NA
WP_001300563.1|2803730_2804843_-|transposase	IS4-like element IS421 family transposase	transposase	NA	NA	NA	NA
WP_000956455.1|2804919_2805072_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA	NA
WP_001130654.1|2805524_2806643_+	glutamate--cysteine ligase	NA	NA	NA	NA	NA
WP_000682509.1|2806708_2806957_+	DUF1158 domain-containing protein	NA	NA	NA	NA	NA
WP_000360951.1|2807021_2807390_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_000351487.1|2807483_2808137_+	oxygen-insensitive NAD(P)H nitroreductase	NA	NA	NA	NA	NA
WP_001153148.1|2808244_2809492_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_000786319.1|2809572_2810949_-	phenylalanine transporter	NA	NA	NA	NA	NA
WP_000573945.1|2811050_2814194_-	Cu(+)/Ag(+) efflux RND transporter permease subunit CusA	NA	S5VTK5	Leptospira_phage	22.1	2.2e-59
WP_000717157.1|2814205_2815429_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB	NA	NA	NA	NA	NA
WP_000709870.1|2815444_2815777_-	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF	NA	NA	NA	NA	NA
WP_000074234.1|2815934_2817308_-	Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC	NA	NA	NA	NA	NA
WP_000770953.1|2817464_2818148_+	copper response regulator transcription factor CusR	NA	W8CYM9	Bacillus_phage	35.1	1.0e-30
WP_000253839.1|2818137_2819580_+	Cu(+)/Ag(+) sensor histidine kinase CusS	NA	A0A1V0SGX0	Hokovirus	26.2	3.0e-11
WP_000383932.1|2819729_2821967_+	phage adsorption protein NrfB	NA	NA	NA	NA	NA
WP_000662357.1|2821953_2824926_+	bacteriophage adsorption protein NfrA	NA	NA	NA	NA	NA
WP_001224604.1|2824926_2825817_+	DUF4434 family protein	NA	NA	NA	NA	NA
WP_001177471.1|2825999_2826761_+	DNA-binding transcriptional regulator EnvY	NA	NA	NA	NA	NA
WP_001201845.1|2827274_2828228_+|protease	omptin family outer membrane protease OmpT	protease	NA	NA	NA	NA
WP_000386784.1|2828477_2829227_-	DNA-binding transcriptional activator AppY	NA	NA	NA	NA	NA
WP_026089880.1|2830129_2830756_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_071592174.1|2830700_2830838_-|capsid	nucleocapsid protein	capsid	NA	NA	NA	NA
WP_001027248.1|2830810_2831554_-|terminase	phage terminase large subunit family protein	terminase	K7PMH7	Enterobacteria_phage	93.1	4.1e-73
WP_000453566.1|2831528_2832074_-	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.3	4.0e-94
WP_001421937.1|2832462_2832657_+	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	100.0	8.7e-28
WP_001031427.1|2832821_2833028_-	hypothetical protein	NA	A0A0K2FJ18	Enterobacteria_phage	100.0	5.8e-30
WP_000079503.1|2833313_2833724_+	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	98.5	1.2e-71
WP_000738500.1|2834014_2834308_+	serum resistance lipoprotein Bor	NA	A0A2R2X2B2	Escherichia_phage	97.9	5.7e-47
WP_001228697.1|2834398_2834581_-|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	78.3	1.4e-16
WP_001135281.1|2834797_2835295_-	lysozyme	NA	M1FJA0	Enterobacteria_phage	98.2	1.1e-90
WP_000839596.1|2835294_2835510_-|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	100.0	9.0e-34
WP_010723085.1|2835752_2836769_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
>prophage 7
NZ_CP040667	Escherichia coli strain S17-1 chromosome, complete genome	4772290	3009842	3066389	4772290	head,transposase,tail,plate	Escherichia_phage(57.89%)	73	NA	NA
WP_085947771.1|3009842_3011004_+|transposase	IS3-like element IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	3.1e-51
WP_000556438.1|3011032_3012493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001295337.1|3013016_3013991_+	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_000004027.1|3014097_3014949_-	taurine dioxygenase	NA	NA	NA	NA	NA
WP_000114620.1|3014945_3015773_-	taurine ABC transporter permease TauC	NA	NA	NA	NA	NA
WP_000939375.1|3015769_3016537_-	taurine ABC transporter ATP-binding subunit	NA	G9BWD6	Planktothrix_phage	40.3	8.6e-26
WP_001018417.1|3016549_3017512_-	taurine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000362028.1|3018127_3018685_+	PIG-L family deacetylase	NA	NA	NA	NA	NA
WP_120795375.1|3018664_3018784_-	protein YkiC	NA	NA	NA	NA	NA
WP_000860444.1|3018808_3020005_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000012218.1|3021456_3021900_+	transferase	NA	NA	NA	NA	NA
WP_000596084.1|3021901_3022675_+	YaiO family outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_001141271.1|3022862_3023138_+	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA	NA
WP_000842106.1|3023172_3024282_+	S-(hydroxymethyl)glutathione dehydrogenase	NA	A0A0K0KVL7	Prochlorococcus_phage	28.6	8.9e-32
WP_000419081.1|3024375_3025209_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_001096705.1|3025432_3025972_-	DUF2058 domain-containing protein	NA	NA	NA	NA	NA
WP_000107627.1|3026073_3027285_-	3-(3-hydroxy-phenyl)propionate transporter	NA	NA	NA	NA	NA
WP_001013499.1|3027862_3028876_-	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	31.1	1.2e-43
WP_000044314.1|3028872_3029823_-	acetaldehyde dehydrogenase	NA	G9E526	Ostreococcus_lucimarinus_virus	35.2	8.7e-36
WP_000160710.1|3029819_3030629_-	2-keto-4-pentenoate hydratase	NA	NA	NA	NA	NA
WP_000514023.1|3030885_3031581_-	hypothetical protein	NA	A0A0C4UQZ7	Shigella_phage	99.1	9.5e-133
WP_001300256.1|3031531_3031720_-	Com family DNA-binding transcriptional regulator	NA	A0A0C4UQS3	Shigella_phage	100.0	1.3e-31
WP_000905064.1|3031814_3032396_-	recombinase family protein	NA	A0A0C4UR34	Shigella_phage	99.5	1.6e-104
WP_001112250.1|3032425_3033421_+	hypothetical protein	NA	A0A077SK37	Escherichia_phage	94.7	6.4e-183
WP_000972171.1|3033423_3033957_+|tail	tail fiber assembly protein	tail	A0A077SL44	Escherichia_phage	98.9	1.2e-95
WP_000972119.1|3033985_3034513_-|tail	tail fiber assembly protein	tail	A0A222YWC2	Escherichia_phage	98.3	1.2e-92
WP_138796075.1|3034515_3036030_-|tail	phage tail protein	tail	C9DGQ8	Escherichia_phage	90.2	2.2e-259
WP_000301695.1|3036029_3036572_-	DUF2313 domain-containing protein	NA	C9DGQ7	Escherichia_phage	99.4	4.8e-100
WP_000331815.1|3036562_3037645_-|plate	baseplate J/gp47 family protein	plate	C9DGQ6	Escherichia_phage	98.9	1.1e-204
WP_000130548.1|3037645_3038083_-	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	100.0	1.0e-79
WP_000442748.1|3038079_3038673_-|plate	phage baseplate assembly protein	plate	A0A0C4UQZ3	Shigella_phage	99.0	1.2e-107
WP_000072824.1|3038660_3039800_-|plate	baseplate protein	plate	C9DGQ3	Escherichia_phage	98.9	3.4e-212
WP_000461070.1|3039792_3041280_-	DMT family permease	NA	A0A0C4UR32	Shigella_phage	98.2	6.6e-240
WP_000147074.1|3041284_3043357_-	tape measure protein	NA	C9DGQ1	Escherichia_phage	96.4	3.8e-312
WP_000344073.1|3043501_3043936_-	hypothetical protein	NA	C9DGP9	Escherichia_phage	97.9	3.8e-71
WP_000918402.1|3043945_3044302_-|tail	tail protein	tail	C9DGP8	Escherichia_phage	94.9	4.2e-60
WP_001280310.1|3044311_3045799_-|tail	tail protein	tail	C9DGP7	Escherichia_phage	99.6	1.3e-280
WP_001438403.1|3045795_3045999_-	DUF2635 domain-containing protein	NA	A0A0C4UR31	Shigella_phage	98.5	1.1e-28
WP_000888926.1|3045985_3046534_-	DUF1834 family protein	NA	C9DGP5	Escherichia_phage	99.5	1.9e-104
WP_001104973.1|3046533_3046959_-	DUF1320 family protein	NA	C9DGP4	Escherichia_phage	97.2	8.8e-73
WP_000017158.1|3046955_3047366_-	hypothetical protein	NA	C9DGP3	Escherichia_phage	98.5	6.1e-63
WP_000637410.1|3047432_3048350_-|head	head protein	head	C9DGP2	Escherichia_phage	99.3	5.2e-179
WP_000716025.1|3048346_3049432_-	hypothetical protein	NA	C9DGP0	Escherichia_phage	98.3	5.2e-194
WP_001350023.1|3049628_3050099_-	phage virion morphogenesis protein	NA	A0A0C4UR01	Shigella_phage	99.4	3.8e-85
WP_001136431.1|3050095_3051415_-|head	phage head morphogenesis protein	head	C9DGN7	Escherichia_phage	98.2	1.5e-248
WP_000532638.1|3051395_3052934_-	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	99.0	1.5e-295
WP_001097325.1|3052933_3054589_-	hypothetical protein	NA	C9DGN5	Escherichia_phage	97.8	0.0e+00
WP_000375394.1|3054596_3055172_-	DUF3486 family protein	NA	A0A0C4UQU5	Shigella_phage	100.0	9.1e-97
WP_000606409.1|3055183_3055474_-	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	100.0	7.4e-47
WP_000364295.1|3055470_3055770_-	DUF2730 family protein	NA	C9DGN2	Escherichia_phage	100.0	5.8e-47
WP_001001316.1|3055769_3055964_-	hypothetical protein	NA	C9DGN1	Escherichia_phage	100.0	6.2e-34
WP_014640567.1|3055920_3056226_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001350022.1|3056122_3056509_-	hypothetical protein	NA	C9DGN0	Escherichia_phage	97.7	2.2e-62
WP_000907405.1|3056492_3057008_-	lysozyme	NA	C9DGM9	Escherichia_phage	99.4	1.9e-93
WP_001163387.1|3057102_3057525_-	positive regulator of late transcription	NA	C9DGM8	Escherichia_phage	99.3	2.2e-76
WP_000004161.1|3057666_3058029_-	hypothetical protein	NA	C9DGM6	Escherichia_phage	99.2	4.1e-63
WP_000515807.1|3058021_3058240_-	hypothetical protein	NA	C9DGM5	Escherichia_phage	100.0	5.6e-39
WP_000133853.1|3058317_3058707_-	hypothetical protein	NA	A0A0C4UR27	Shigella_phage	98.4	2.3e-67
WP_000091782.1|3058703_3059255_-	regulatory protein GemA	NA	A0A0C4UQU3	Shigella_phage	96.7	1.2e-98
WP_000431116.1|3059325_3059592_+	hypothetical protein	NA	Q38493	Escherichia_phage	98.9	2.3e-39
WP_001058561.1|3059530_3059833_-	hypothetical protein	NA	A0A0C4UQY6	Shigella_phage	99.0	1.4e-48
WP_000429765.1|3059834_3060017_-	hypothetical protein	NA	A0A0C4UR26	Shigella_phage	83.3	1.4e-24
WP_000465551.1|3060003_3060534_-	hypothetical protein	NA	C9DGM0	Escherichia_phage	97.2	6.4e-97
WP_000227260.1|3060533_3061064_-	hypothetical protein	NA	A0A0C4UQU2	Shigella_phage	95.5	4.2e-96
WP_001107930.1|3061162_3061687_-	host-nuclease inhibitor protein Gam	NA	C9DGL8	Escherichia_phage	100.0	1.5e-90
WP_000255655.1|3061706_3062006_-	hypothetical protein	NA	C9DGL7	Escherichia_phage	99.0	2.8e-49
WP_001101152.1|3062006_3062426_-	hypothetical protein	NA	C9DGL6	Escherichia_phage	95.7	8.7e-73
WP_001151288.1|3062440_3062704_-	hypothetical protein	NA	A0A0C4UQU1	Shigella_phage	96.6	2.5e-38
WP_000334953.1|3062715_3062946_-	hypothetical protein	NA	C9DGL4	Escherichia_phage	97.3	6.5e-38
WP_000968312.1|3062948_3063176_-	hypothetical protein	NA	C9DGL3	Escherichia_phage	100.0	3.2e-37
WP_001026710.1|3063191_3064130_-	AAA family ATPase	NA	A0A0C4UQR3	Shigella_phage	98.1	1.3e-169
WP_000424754.1|3064168_3066160_-|transposase	transposase	transposase	C9DGL1	Escherichia_phage	93.5	0.0e+00
WP_000337186.1|3066161_3066389_-	transcriptional regulator	NA	A0A2I7S995	Vibrio_phage	66.7	4.8e-17
>prophage 8
NZ_CP040667	Escherichia coli strain S17-1 chromosome, complete genome	4772290	3089064	3176354	4772290	integrase,head,transposase,tail,plate	Escherichia_phage(52.38%)	105	3086047:3086063	3111937:3111953
3086047:3086063	attL	GACCAGGTGAAGGACAT	NA	NA	NA	NA
WP_000952373.1|3089064_3090237_+|transposase	IS21-like element IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	99.7	8.3e-230
WP_000544830.1|3090236_3091034_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	99.6	1.9e-145
WP_031943127.1|3091245_3091458_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096953406.1|3091468_3092122_+	aminoglycoside 3'-phosphotransferase	NA	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	57.3	1.7e-67
WP_001029679.1|3092240_3093062_+|transposase	heteromeric transposase endonuclease subunit TnsA	transposase	NA	NA	NA	NA
WP_000267723.1|3093048_3095157_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_001276994.1|3095153_3096821_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_001243518.1|3096823_3098350_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000251879.1|3098350_3099967_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_001271300.1|3100197_3100575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001334979.1|3100628_3100952_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000119696.1|3100984_3101356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001444089.1|3101416_3101914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001206315.1|3101989_3102778_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA	NA
WP_000704156.1|3102835_3103360_-	streptothricin N-acetyltransferase Sat2	NA	E4ZFP7	Streptococcus_phage	38.9	4.2e-16
WP_000777554.1|3103454_3103928_-	trimethoprim-resistant dihydrofolate reductase DfrA1	NA	A0A140HLG8	Bacillus_phage	34.4	1.6e-19
WP_000071896.1|3104259_3104796_+|integrase	class 2 integron integrase IntI2	integrase	A0A1P8DJJ6	Virus_Rctr41k	34.4	6.9e-14
WP_000497519.1|3104910_3105237_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	52.0	2.1e-18
WP_001353740.1|3105424_3105664_-	DUF1819 family protein	NA	NA	NA	NA	NA
WP_011205811.1|3106439_3106730_-	protein TraA	NA	NA	NA	NA	NA
WP_011205812.1|3106737_3107178_-	protein TraB	NA	NA	NA	NA	NA
WP_011205813.1|3107193_3110379_-	DUF1738 domain-containing protein	NA	A0A1B1IRD0	uncultured_Mediterranean_phage	35.2	3.1e-37
WP_011205814.1|3110385_3110649_-	protein TraD	NA	NA	NA	NA	NA
WP_011205815.1|3110654_3112868_-	DNA topoisomerase III	NA	NA	NA	NA	NA
3111937:3111953	attR	ATGTCCTTCACCTGGTC	NA	NA	NA	NA
WP_011205816.1|3112882_3113416_-	conjugative transfer signal peptidase TraF	NA	NA	NA	NA	NA
WP_011205817.1|3113412_3115320_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_011205818.1|3115316_3117515_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA	NA
WP_008832110.1|3117549_3117921_-	conjugal transfer transcriptional regulator TraJ	NA	NA	NA	NA	NA
WP_011205820.1|3118288_3118693_+	TraK family protein	NA	NA	NA	NA	NA
WP_011205821.1|3118692_3119418_+	protein TraL	NA	NA	NA	NA	NA
WP_011205822.1|3119414_3119852_+	conjugal transfer protein TraM	NA	NA	NA	NA	NA
WP_011205823.1|3119904_3121251_-	phosphoribosyltransferase	NA	A0A0R6PHM5	Moraxella_phage	37.9	1.0e-37
WP_011205824.1|3121279_3121627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011205826.1|3122868_3123396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011205827.1|3123405_3123909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011205828.1|3123979_3125056_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA	NA
WP_011645034.1|3125052_3125832_-	ParA family protein	NA	NA	NA	NA	NA
WP_011205830.1|3125828_3126134_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_011205831.1|3126307_3127261_-	tellurium resistance system protein klaC	NA	NA	NA	NA	NA
WP_011205832.1|3127257_3128394_-	tellurium resistance system protein klaB	NA	NA	NA	NA	NA
WP_106377354.1|3128411_3129164_-	protein KlaA	NA	NA	NA	NA	NA
WP_011205834.1|3129307_3129622_-	DUF2761 domain-containing protein	NA	NA	NA	NA	NA
WP_011645016.1|3129649_3129973_-	protein KleE	NA	NA	NA	NA	NA
WP_011205837.1|3130318_3130549_-	stable inheritance protein KleA	NA	NA	NA	NA	NA
WP_011205838.1|3130701_3130917_-	DUF2688 domain-containing protein	NA	NA	NA	NA	NA
WP_011205839.1|3130965_3131199_-	protein KleA	NA	NA	NA	NA	NA
WP_011205775.1|3131424_3131682_-	transcriptional repressor KorC	NA	NA	NA	NA	NA
WP_032448828.1|3133854_3134370_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	98.2	1.1e-85
WP_001143750.1|3134532_3137541_+|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	64.4	0.0e+00
WP_000028208.1|3138118_3138451_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000844627.1|3139016_3139259_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000470728.1|3139290_3139968_-	tetracycline resistance transcriptional repressor TetR(A)	NA	NA	NA	NA	NA
WP_000514023.1|3140850_3141546_-	hypothetical protein	NA	A0A0C4UQZ7	Shigella_phage	99.1	9.5e-133
WP_001300256.1|3141496_3141685_-	Com family DNA-binding transcriptional regulator	NA	A0A0C4UQS3	Shigella_phage	100.0	1.3e-31
WP_000905064.1|3141779_3142361_-	recombinase family protein	NA	A0A0C4UR34	Shigella_phage	99.5	1.6e-104
WP_001112250.1|3142390_3143386_+	hypothetical protein	NA	A0A077SK37	Escherichia_phage	94.7	6.4e-183
WP_000972171.1|3143388_3143922_+|tail	tail fiber assembly protein	tail	A0A077SL44	Escherichia_phage	98.9	1.2e-95
WP_000972119.1|3143950_3144478_-|tail	tail fiber assembly protein	tail	A0A222YWC2	Escherichia_phage	98.3	1.2e-92
WP_138796075.1|3144480_3145995_-|tail	phage tail protein	tail	C9DGQ8	Escherichia_phage	90.2	2.2e-259
WP_000301695.1|3145994_3146537_-	DUF2313 domain-containing protein	NA	C9DGQ7	Escherichia_phage	99.4	4.8e-100
WP_000331815.1|3146527_3147610_-|plate	baseplate J/gp47 family protein	plate	C9DGQ6	Escherichia_phage	98.9	1.1e-204
WP_000130548.1|3147610_3148048_-	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	100.0	1.0e-79
WP_000442748.1|3148044_3148638_-|plate	phage baseplate assembly protein	plate	A0A0C4UQZ3	Shigella_phage	99.0	1.2e-107
WP_000072824.1|3148625_3149765_-|plate	baseplate protein	plate	C9DGQ3	Escherichia_phage	98.9	3.4e-212
WP_000461070.1|3149757_3151245_-	DMT family permease	NA	A0A0C4UR32	Shigella_phage	98.2	6.6e-240
WP_000147074.1|3151249_3153322_-	tape measure protein	NA	C9DGQ1	Escherichia_phage	96.4	3.8e-312
WP_000344073.1|3153466_3153901_-	hypothetical protein	NA	C9DGP9	Escherichia_phage	97.9	3.8e-71
WP_000918402.1|3153910_3154267_-|tail	tail protein	tail	C9DGP8	Escherichia_phage	94.9	4.2e-60
WP_001280310.1|3154276_3155764_-|tail	tail protein	tail	C9DGP7	Escherichia_phage	99.6	1.3e-280
WP_001438403.1|3155760_3155964_-	DUF2635 domain-containing protein	NA	A0A0C4UR31	Shigella_phage	98.5	1.1e-28
WP_000888926.1|3155950_3156499_-	DUF1834 family protein	NA	C9DGP5	Escherichia_phage	99.5	1.9e-104
WP_001104973.1|3156498_3156924_-	DUF1320 family protein	NA	C9DGP4	Escherichia_phage	97.2	8.8e-73
WP_000017158.1|3156920_3157331_-	hypothetical protein	NA	C9DGP3	Escherichia_phage	98.5	6.1e-63
WP_000637410.1|3157397_3158315_-|head	head protein	head	C9DGP2	Escherichia_phage	99.3	5.2e-179
WP_000716025.1|3158311_3159397_-	hypothetical protein	NA	C9DGP0	Escherichia_phage	98.3	5.2e-194
WP_001350023.1|3159593_3160064_-	phage virion morphogenesis protein	NA	A0A0C4UR01	Shigella_phage	99.4	3.8e-85
WP_001136431.1|3160060_3161380_-|head	phage head morphogenesis protein	head	C9DGN7	Escherichia_phage	98.2	1.5e-248
WP_000532638.1|3161360_3162899_-	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	99.0	1.5e-295
WP_001097325.1|3162898_3164554_-	hypothetical protein	NA	C9DGN5	Escherichia_phage	97.8	0.0e+00
WP_000375394.1|3164561_3165137_-	DUF3486 family protein	NA	A0A0C4UQU5	Shigella_phage	100.0	9.1e-97
WP_000606409.1|3165148_3165439_-	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	100.0	7.4e-47
WP_000364295.1|3165435_3165735_-	DUF2730 family protein	NA	C9DGN2	Escherichia_phage	100.0	5.8e-47
WP_001001316.1|3165734_3165929_-	hypothetical protein	NA	C9DGN1	Escherichia_phage	100.0	6.2e-34
WP_014640567.1|3165885_3166191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001350022.1|3166087_3166474_-	hypothetical protein	NA	C9DGN0	Escherichia_phage	97.7	2.2e-62
WP_000907405.1|3166457_3166973_-	lysozyme	NA	C9DGM9	Escherichia_phage	99.4	1.9e-93
WP_001163387.1|3167067_3167490_-	positive regulator of late transcription	NA	C9DGM8	Escherichia_phage	99.3	2.2e-76
WP_000004161.1|3167631_3167994_-	hypothetical protein	NA	C9DGM6	Escherichia_phage	99.2	4.1e-63
WP_000515807.1|3167986_3168205_-	hypothetical protein	NA	C9DGM5	Escherichia_phage	100.0	5.6e-39
WP_000133853.1|3168282_3168672_-	hypothetical protein	NA	A0A0C4UR27	Shigella_phage	98.4	2.3e-67
WP_000091782.1|3168668_3169220_-	regulatory protein GemA	NA	A0A0C4UQU3	Shigella_phage	96.7	1.2e-98
WP_000431116.1|3169290_3169557_+	hypothetical protein	NA	Q38493	Escherichia_phage	98.9	2.3e-39
WP_001058561.1|3169495_3169798_-	hypothetical protein	NA	A0A0C4UQY6	Shigella_phage	99.0	1.4e-48
WP_000429765.1|3169799_3169982_-	hypothetical protein	NA	A0A0C4UR26	Shigella_phage	83.3	1.4e-24
WP_000465551.1|3169968_3170499_-	hypothetical protein	NA	C9DGM0	Escherichia_phage	97.2	6.4e-97
WP_000227260.1|3170498_3171029_-	hypothetical protein	NA	A0A0C4UQU2	Shigella_phage	95.5	4.2e-96
WP_001107930.1|3171127_3171652_-	host-nuclease inhibitor protein Gam	NA	C9DGL8	Escherichia_phage	100.0	1.5e-90
WP_000255655.1|3171671_3171971_-	hypothetical protein	NA	C9DGL7	Escherichia_phage	99.0	2.8e-49
WP_001101152.1|3171971_3172391_-	hypothetical protein	NA	C9DGL6	Escherichia_phage	95.7	8.7e-73
WP_001151288.1|3172405_3172669_-	hypothetical protein	NA	A0A0C4UQU1	Shigella_phage	96.6	2.5e-38
WP_000334953.1|3172680_3172911_-	hypothetical protein	NA	C9DGL4	Escherichia_phage	97.3	6.5e-38
WP_000968312.1|3172913_3173141_-	hypothetical protein	NA	C9DGL3	Escherichia_phage	100.0	3.2e-37
WP_001026710.1|3173156_3174095_-	AAA family ATPase	NA	A0A0C4UQR3	Shigella_phage	98.1	1.3e-169
WP_000424754.1|3174133_3176125_-|transposase	transposase	transposase	C9DGL1	Escherichia_phage	93.5	0.0e+00
WP_000337186.1|3176126_3176354_-	transcriptional regulator	NA	A0A2I7S995	Vibrio_phage	66.7	4.8e-17
>prophage 9
NZ_CP040667	Escherichia coli strain S17-1 chromosome, complete genome	4772290	3217748	3269615	4772290	holin,transposase,integrase	Acinetobacter_phage(28.57%)	46	3209176:3209192	3272703:3272719
3209176:3209192	attL	GTAGGCCGGATAAGGCG	NA	NA	NA	NA
WP_000131044.1|3217748_3219782_-|holin	choline BCCT transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	27.4	3.4e-21
WP_001335745.1|3219910_3220498_+	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_000089110.1|3220511_3221984_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001159094.1|3221997_3223668_+|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	31.2	4.7e-61
WP_001209100.1|3223880_3224549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000370307.1|3224791_3225487_-	lactate utilization protein C	NA	NA	NA	NA	NA
WP_000023927.1|3225479_3226907_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
WP_001102108.1|3226917_3227637_-	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_000339594.1|3228163_3229018_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001046307.1|3229243_3230569_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	47.6	2.5e-113
WP_000474084.1|3230677_3230914_+	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
WP_014639045.1|3230925_3231519_+	reactive chlorine species resistance protein RclC	NA	NA	NA	NA	NA
WP_085947771.1|3232791_3233954_-|transposase	IS3-like element IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	3.1e-51
WP_000020224.1|3234000_3234888_-	inverse autotransporter beta domain-containing protein	NA	NA	NA	NA	NA
WP_000662258.1|3236002_3236104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000803998.1|3236467_3236731_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_000866436.1|3236730_3236871_+	50S ribosomal protein L36	NA	NA	NA	NA	NA
WP_001147279.1|3236905_3237133_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001301257.1|3237956_3238499_+	ECP biosynthesis operon DNA-binding transcriptional regulator EcpR	NA	NA	NA	NA	NA
WP_000730972.1|3238573_3239161_+	common pilus major fimbrillin subunit EcpA	NA	NA	NA	NA	NA
WP_000716398.1|3239218_3239887_+	fimbrial chaperone EcpB	NA	NA	NA	NA	NA
WP_001131096.1|3239912_3242438_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_001310578.1|3242427_3244071_+	fimbrial adhesin EcpD	NA	NA	NA	NA	NA
WP_001350485.1|3244039_3244750_+	fimbrial chaperone EcpE	NA	NA	NA	NA	NA
WP_001303809.1|3245062_3245392_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
WP_001019919.1|3245639_3246254_-	YagU family protein	NA	NA	NA	NA	NA
WP_000070700.1|3246671_3247361_+	aldehyde dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_000643333.1|3247357_3248314_+	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA	NA
WP_000667026.1|3248310_3250509_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	A0A0P0I429	Acinetobacter_phage	25.8	2.5e-38
WP_000121347.1|3250518_3251475_+	molybdenum cofactor insertion chaperone PaoD	NA	NA	NA	NA	NA
WP_001111342.1|3251453_3251864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001407714.1|3252148_3253549_+|integrase	integrase family protein	integrase	A0A221SAN4	Ralstonia_phage	28.4	9.5e-07
WP_000224818.1|3253665_3254106_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010723085.1|3254195_3255212_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
WP_071819598.1|3255367_3255526_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_000072039.1|3255644_3256499_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001214248.1|3256525_3257224_+	recombinase family protein	NA	NA	NA	NA	NA
WP_000860996.1|3257495_3258122_+	inovirus Gp2 family protein	NA	NA	NA	NA	NA
WP_000388269.1|3258212_3258944_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001281824.1|3260138_3261143_+	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_001121657.1|3261281_3262040_+	DNA-binding transcriptional repressor XynR	NA	NA	NA	NA	NA
WP_000406871.1|3262044_3263655_-	glycoside hydrolase family 43 protein	NA	NA	NA	NA	NA
WP_000192862.1|3263666_3265049_-	MFS transporter	NA	NA	NA	NA	NA
WP_000151259.1|3265275_3267243_-	xylonate dehydratase YagF	NA	NA	NA	NA	NA
WP_001136613.1|3267257_3268166_-	2-keto-3-deoxygluconate aldolase	NA	NA	NA	NA	NA
WP_010723086.1|3268460_3269615_+|transposase	IS481-like element ISEc19 family transposase	transposase	NA	NA	NA	NA
3272703:3272719	attR	GTAGGCCGGATAAGGCG	NA	NA	NA	NA
>prophage 10
NZ_CP040667	Escherichia coli strain S17-1 chromosome, complete genome	4772290	4251602	4278553	4772290	transposase,integrase,tRNA	Virus_Rctr41k(33.33%)	27	4272392:4272405	4279426:4279439
WP_000499788.1|4251602_4253492_+|tRNA	tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_000932839.1|4253555_4254179_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_000116695.1|4254795_4255176_+	F0F1 ATP synthase subunit I	NA	NA	NA	NA	NA
WP_000135625.1|4255184_4256000_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_000429386.1|4256046_4256286_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_001052219.1|4256347_4256818_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_001288587.1|4256832_4257366_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_001176745.1|4257378_4258920_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_000896498.1|4258970_4259834_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_000190506.1|4259860_4261243_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_001251965.1|4261263_4261683_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_000933736.1|4262035_4263406_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0N7G7I9	Chrysochromulina_ericina_virus	36.7	3.1e-34
WP_000334099.1|4263567_4265397_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	43.4	1.9e-132
WP_001029679.1|4265556_4266378_+|transposase	heteromeric transposase endonuclease subunit TnsA	transposase	NA	NA	NA	NA
WP_000267723.1|4266364_4268473_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_001276994.1|4268469_4270137_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_001243518.1|4270139_4271666_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000251879.1|4271666_4273283_+|transposase	transposase	transposase	NA	NA	NA	NA
4272392:4272405	attL	TAAGGATTATTTAG	NA	NA	NA	NA
WP_001271300.1|4273513_4273891_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001334979.1|4273944_4274268_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000119696.1|4274300_4274672_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001444089.1|4274732_4275230_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001206315.1|4275305_4276094_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA	NA
WP_000704156.1|4276151_4276676_-	streptothricin N-acetyltransferase Sat2	NA	E4ZFP7	Streptococcus_phage	38.9	4.2e-16
WP_000777554.1|4276770_4277244_-	trimethoprim-resistant dihydrofolate reductase DfrA1	NA	A0A140HLG8	Bacillus_phage	34.4	1.6e-19
WP_000071896.1|4277575_4278112_+|integrase	class 2 integron integrase IntI2	integrase	A0A1P8DJJ6	Virus_Rctr41k	34.4	6.9e-14
WP_000497519.1|4278226_4278553_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	52.0	2.1e-18
4279426:4279439	attR	CTAAATAATCCTTA	NA	NA	NA	NA
