The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP035103	Kocuria rosea strain ATCC 186 chromosome, complete genome	3946651	387065	453970	3946651	transposase	Streptococcus_phage(20.0%)	59	NA	NA
WP_109269425.1|387065_387898_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_126346842.1|388022_388574_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109269423.1|388834_389518_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.5	4.5e-26
WP_167508847.1|389514_391407_-	DUF4118 domain-containing protein	NA	A0A1V0SGX0	Hokovirus	24.4	2.9e-06
WP_167508848.1|391714_393112_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_109269420.1|394225_394588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109269419.1|395161_395596_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_109269418.1|395588_395921_-	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_126346845.1|396332_396710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109269416.1|397190_397520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_126346846.1|397729_397957_-	hypothetical protein	NA	NA	NA	NA	NA
WP_126346847.1|398272_398728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109269413.1|399135_399333_+	hypothetical protein	NA	NA	NA	NA	NA
WP_126346848.1|399535_400345_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109269411.1|400595_401081_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109269410.1|401159_401390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_126346849.1|401775_402000_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138976440.1|402007_403639_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109269408.1|403817_404456_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_109269407.1|404636_406049_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	27.5	1.4e-10
WP_109269406.1|406047_407028_+	DMT family transporter	NA	NA	NA	NA	NA
WP_109223276.1|407017_408265_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	41.4	1.2e-80
WP_109269521.1|408457_408967_-	serine acetyltransferase	NA	NA	NA	NA	NA
WP_109269522.1|409209_410013_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_109269523.1|410309_411572_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
WP_109269524.1|411657_412995_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	37.0	6.2e-64
WP_109244589.1|413378_414011_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_109269525.1|414007_415306_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_109269526.1|415549_416644_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_109269527.1|416646_417402_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.8	3.5e-24
WP_138976501.1|418631_420182_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_109269553.1|420698_421709_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.5	7.5e-38
WP_031283557.1|421996_422389_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_017834502.1|422782_422983_-	antitoxin	NA	NA	NA	NA	NA
WP_081994608.1|424693_426274_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	33.0	2.1e-34
WP_109244524.1|427253_427784_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_017834499.1|428294_428693_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109269490.1|428791_429280_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109244523.1|429573_430398_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_017834496.1|430513_430753_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_017834495.1|430966_432895_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	39.7	3.2e-101
WP_017834494.1|433009_433438_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_109269491.1|433482_434400_+	NADP-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_017834492.1|434551_434746_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109269492.1|434864_436100_-	cytochrome P450	NA	NA	NA	NA	NA
WP_058874012.1|436179_437424_-	NarK/NasA family nitrate transporter	NA	NA	NA	NA	NA
WP_109244522.1|437460_438294_-	respiratory nitrate reductase subunit gamma	NA	NA	NA	NA	NA
WP_017834488.1|438290_438989_-	nitrate reductase molybdenum cofactor assembly chaperone	NA	NA	NA	NA	NA
WP_109269493.1|438988_440659_-	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	43.5	1.3e-18
WP_109269494.1|440658_444378_-	nitrate reductase subunit alpha	NA	NA	NA	NA	NA
WP_058874006.1|444800_445922_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_031283581.1|446021_446297_+	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_051063819.1|446293_446887_+	NTP transferase domain-containing protein	NA	NA	NA	NA	NA
WP_058874004.1|446915_447206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109223112.1|447520_447988_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_109269495.1|448013_449216_-	hemin transporter	NA	NA	NA	NA	NA
WP_058874019.1|449394_449727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109269496.1|449906_452585_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_138976441.1|453075_453970_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP035103	Kocuria rosea strain ATCC 186 chromosome, complete genome	3946651	2720501	2776682	3946651	tRNA,transposase,protease	Bacillus_phage(15.38%)	48	NA	NA
WP_109269536.1|2720501_2720927_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	44.2	7.1e-30
WP_109269537.1|2721054_2721883_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_126346459.1|2722112_2723123_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_167508889.1|2723234_2723486_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_138976475.1|2723553_2724735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138976476.1|2725077_2726550_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109269538.1|2727584_2728370_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	32.9	6.3e-24
WP_109269539.1|2728366_2729941_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_167508890.1|2731346_2732033_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_109269470.1|2731987_2733058_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_109269471.1|2733351_2734498_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	30.5	1.0e-22
WP_167508891.1|2736258_2736909_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_167508892.1|2737396_2738173_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_109269474.1|2738777_2739797_+	GDP-mannose 4,6-dehydratase	NA	M4QRT5	Synechococcus_phage	59.9	2.8e-109
WP_109269475.1|2739823_2740828_+	GDP-L-fucose synthase	NA	D1LW79	Prochlorococcus_phage	53.5	7.4e-94
WP_109269476.1|2741037_2741616_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_109269477.1|2741722_2742334_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
WP_109269478.1|2742780_2744331_+	sugar transferase	NA	NA	NA	NA	NA
WP_167508893.1|2744476_2744815_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_167508894.1|2744760_2745276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109269480.1|2745626_2747111_+	sugar transferase	NA	NA	NA	NA	NA
WP_109269481.1|2747135_2747552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167508895.1|2747773_2748394_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_109243337.1|2748587_2749004_+	VOC family protein	NA	NA	NA	NA	NA
WP_109269483.1|2749361_2749823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109269484.1|2750140_2751649_+	sugar transferase	NA	NA	NA	NA	NA
WP_109269485.1|2751759_2753256_+	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_167508896.1|2753470_2754076_+	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA	NA
WP_167508897.1|2754308_2755160_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_109269488.1|2756820_2758128_-	oligosaccharide repeat unit polymerase	NA	NA	NA	NA	NA
WP_109269489.1|2758383_2759007_-	SGNH/GDSL hydrolase family protein	NA	A0A0A0RS52	Bacillus_phage	32.2	8.8e-05
WP_109223276.1|2759149_2760397_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	41.4	1.2e-80
WP_109269245.1|2761274_2762525_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	44.1	3.0e-76
WP_167508898.1|2762880_2763201_-|transposase	transposase family protein	transposase	A0A2H4PDF8	Mycobacterium_phage	40.2	1.8e-06
WP_138976478.1|2765025_2765244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138976479.1|2765240_2766347_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_167508899.1|2766343_2767474_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_109269249.1|2767485_2768103_-	acetyltransferase	NA	NA	NA	NA	NA
WP_167508900.1|2768243_2769479_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_109269251.1|2769558_2770590_+	GDP-mannose 4,6-dehydratase	NA	M4QRT5	Synechococcus_phage	59.8	1.1e-108
WP_109269252.1|2770604_2771606_+	GDP-L-fucose synthase	NA	D1LW79	Prochlorococcus_phage	52.6	9.6e-94
WP_109269254.1|2772281_2773355_+	CpsD/CapB family tyrosine-protein kinase	NA	NA	NA	NA	NA
WP_138976481.1|2773671_2774022_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109269255.1|2774218_2774626_-	VOC family protein	NA	NA	NA	NA	NA
WP_035926607.1|2774622_2774916_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_109269256.1|2775136_2775439_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_109269257.1|2775462_2776065_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	42.2	2.6e-38
WP_109269258.1|2776061_2776682_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A1S6UA97	Serratia_phage	38.2	2.3e-21
>prophage 3
NZ_CP035103	Kocuria rosea strain ATCC 186 chromosome, complete genome	3946651	2989184	2996505	3946651		Bacillus_phage(33.33%)	8	NA	NA
WP_109268838.1|2989184_2989907_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	38.3	2.5e-35
WP_017832746.1|2989919_2991386_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	29.2	6.2e-25
WP_017832747.1|2991395_2992418_-	DUF4440 domain-containing protein	NA	J9Q745	Salmonella_phage	42.7	7.2e-20
WP_095650865.1|2992478_2993174_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	41.0	1.1e-16
WP_035926880.1|2993336_2994968_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	53.6	1.2e-146
WP_109243242.1|2995218_2995842_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_109268839.1|2995945_2996164_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109268848.1|2996160_2996505_-	DUF3263 domain-containing protein	NA	A0A0A7RXU7	Mycobacterium_phage	53.8	8.6e-10
