The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP035101	Staphylococcus aureus subsp. aureus strain ATCC 12600 chromosome, complete genome	2755072	717540	725360	2755072		Hokovirus(16.67%)	10	NA	NA
WP_000244412.1|717540_718596_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
WP_000149344.1|718595_719282_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|719256_719730_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093553.1|720071_720512_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637687.1|720791_721376_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|721474_722188_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|722191_722611_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|722612_723281_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|723631_724225_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217785.1|724208_725360_+	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 2
NZ_CP035101	Staphylococcus aureus subsp. aureus strain ATCC 12600 chromosome, complete genome	2755072	737332	752063	2755072		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_001836199.1|737332_738391_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.4	1.8e-21
WP_000197271.1|738741_739284_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429014.1|739907_740825_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
WP_001790641.1|740915_741017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|741094_742600_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|742940_743441_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|743460_744327_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|745127_745526_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|745488_747594_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|747711_748683_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|749196_749352_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|749390_750362_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245578.1|750348_751305_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616842.1|751301_752063_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 3
NZ_CP035101	Staphylococcus aureus subsp. aureus strain ATCC 12600 chromosome, complete genome	2755072	837311	884244	2755072	capsid,holin,integrase,head,plate,terminase,portal,tail	Staphylococcus_phage(94.44%)	74	835408:835424	870155:870171
835408:835424	attL	GAAATTAGATAAAAACA	NA	NA	NA	NA
WP_001006454.1|837311_838562_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.5	1.4e-110
WP_001010508.1|838551_839016_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_001074405.1|839166_840564_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_001145725.1|840631_841681_-|integrase	site-specific integrase	integrase	A0A0F6N3M4	Staphylococcus_phage	100.0	9.1e-204
WP_000143212.1|841792_841993_+	excisionase	NA	Q38044	Staphylococcus_phage	100.0	5.6e-30
WP_000391592.1|841929_842835_-	hypothetical protein	NA	A0A0F6N3N6	Staphylococcus_phage	100.0	1.4e-168
WP_000661437.1|842866_843592_-	PH domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	100.0	9.9e-125
WP_000775187.1|843619_844294_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	100.0	4.9e-126
WP_001055143.1|844310_844643_-	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	100.0	4.1e-57
WP_000108122.1|844905_845100_+	helix-turn-helix transcriptional regulator	NA	A0A0F6N3M9	Staphylococcus_phage	100.0	1.1e-25
WP_001002757.1|845099_845867_+	phage antirepressor Ant	NA	A0A0F6N3N8	Staphylococcus_phage	100.0	1.1e-142
WP_000187184.1|845867_846092_+	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_001836220.1|846131_846581_+	hypothetical protein	NA	A0A0F6N3I1	Staphylococcus_phage	100.0	3.0e-79
WP_000977381.1|846594_846816_+	hypothetical protein	NA	A0A0F6N3I2	Staphylococcus_phage	100.0	1.5e-31
WP_000066011.1|846808_846970_+	DUF1270 domain-containing protein	NA	Q4ZAZ7	Staphylococcus_virus	100.0	2.5e-20
WP_000165363.1|847063_847366_+	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	100.0	1.4e-48
WP_001836221.1|847370_847631_+	DUF1108 family protein	NA	A0A0F6N3P1	Staphylococcus_phage	100.0	1.2e-43
WP_001004336.1|847643_848180_+	host-nuclease inhibitor Gam family protein	NA	A0A0F6N4M6	Staphylococcus_phage	100.0	1.4e-80
WP_000840496.1|848180_848831_+	ERF family protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
WP_001099009.1|848827_849271_+	single-stranded DNA-binding protein	NA	A0A2I6PD99	Staphylococcus_phage	100.0	1.8e-76
WP_000057263.1|849282_849957_+	hypothetical protein	NA	A1KX69	Staphylococcus_virus	100.0	3.9e-131
WP_001081076.1|849953_850103_+	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
WP_000414755.1|850095_850377_-	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_001836222.1|850442_851213_+	conserved phage C-terminal domain-containing protein	NA	G4KNP0	Staphylococcus_phage	99.6	9.3e-121
WP_000803062.1|851222_852002_+	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000256589.1|851995_852154_+	hypothetical protein	NA	A0A2H4PQI7	Staphylococcus_phage	100.0	4.5e-22
WP_001123695.1|852166_852388_+	DUF3269 family protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
WP_001836225.1|852397_852802_+	DUF1064 domain-containing protein	NA	A1KX76	Staphylococcus_virus	99.3	3.6e-68
WP_001187243.1|852806_852992_+	DUF3113 family protein	NA	A0A0F6N3K7	Staphylococcus_phage	100.0	1.1e-27
WP_000101252.1|852992_853298_+	hypothetical protein	NA	A0A0F6N4H9	Staphylococcus_phage	100.0	1.7e-49
WP_000029376.1|853425_853782_+	hypothetical protein	NA	A0A0F6N3E3	Staphylococcus_phage	100.0	6.5e-61
WP_001562543.1|853785_854028_+	phage protein	NA	A0A0F6N3E1	Staphylococcus_phage	100.0	6.6e-41
WP_001557190.1|854036_854408_+	hypothetical protein	NA	A0A0F6N3K4	Staphylococcus_phage	100.0	3.6e-54
WP_001836226.1|854400_854652_+	DUF1024 family protein	NA	A0A1W6JPK6	Staphylococcus_phage	98.8	2.1e-37
WP_000028421.1|854641_854824_+	hypothetical protein	NA	A0EWY1	Staphylococcus_phage	98.3	1.0e-25
WP_000185651.1|854816_855347_+	dUTP pyrophosphatase	NA	A0A0F6N3L0	Staphylococcus_phage	100.0	1.7e-94
WP_000195785.1|855383_855590_+	DUF1381 domain-containing protein	NA	A0A0F6N4I4	Staphylococcus_phage	100.0	1.1e-20
WP_000132920.1|855586_855781_+	hypothetical protein	NA	S4SX95	Staphylococcus_phage	100.0	7.9e-29
WP_001072794.1|855777_855981_+	hypothetical protein	NA	B2ZYX5	Staphylococcus_phage	98.5	8.8e-31
WP_001657250.1|855973_856147_+	transcriptional activator RinB	NA	A0A0F6N3E7	Staphylococcus_phage	100.0	2.2e-22
WP_000990005.1|856147_856294_+	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	100.0	2.2e-15
WP_000162701.1|856317_856740_+	RinA family phage transcriptional activator	NA	A0A0F6N3E5	Staphylococcus_phage	100.0	1.2e-74
WP_001038244.1|856927_857422_+|terminase	terminase small subunit	terminase	A0A0F6N3K6	Staphylococcus_phage	100.0	7.8e-89
WP_000273011.1|857424_858720_+|terminase	PBSX family phage terminase large subunit	terminase	A0A0F6N3L3	Staphylococcus_phage	100.0	3.0e-257
WP_000909970.1|858730_860269_+|portal	phage portal protein	portal	A0A0F6N4I8	Staphylococcus_phage	100.0	2.4e-293
WP_001133044.1|860275_861271_+|capsid	minor capsid protein	capsid	A0A0F6N3F1	Staphylococcus_phage	100.0	2.0e-184
WP_000072208.1|861343_861514_+	hypothetical protein	NA	A0A0F6N3E9	Staphylococcus_phage	100.0	1.5e-23
WP_000392146.1|861622_862243_+	DUF4355 domain-containing protein	NA	A0A0F6N3K8	Staphylococcus_phage	100.0	2.1e-70
WP_001836233.1|862256_863231_+|capsid	phage major capsid protein	capsid	A0A0F6N3L5	Staphylococcus_phage	100.0	3.7e-183
WP_001836234.1|863252_863540_+	hypothetical protein	NA	A0A0F6N4J3	Staphylococcus_phage	100.0	1.6e-46
WP_000208960.1|863548_863881_+|head,tail	phage head-tail connector protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
WP_025175363.1|863877_864180_+	hypothetical protein	NA	B2ZYY8	Staphylococcus_phage	98.0	7.4e-50
WP_001017815.1|864179_864527_+	HK97 gp10 family phage protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
WP_000188649.1|864538_864922_+	hypothetical protein	NA	A0A0F6N3L1	Staphylococcus_phage	100.0	1.5e-68
WP_000002577.1|864940_865522_+|tail	phage major tail protein, TP901-1 family	tail	A0A0F6N3L8	Staphylococcus_phage	100.0	4.9e-106
WP_001100161.1|865583_865949_+	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	100.0	3.6e-59
WP_000105584.1|865978_866323_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_000141480.1|866339_869807_+	hypothetical protein	NA	A0A0F6N3F9	Staphylococcus_phage	100.0	4.2e-245
WP_000350675.1|869819_870767_+|tail	phage tail family protein	tail	A0A0F6N3L4	Staphylococcus_phage	100.0	2.8e-183
870155:870171	attR	GAAATTAGATAAAAACA	NA	NA	NA	NA
WP_000152718.1|870775_872674_+|tail	phage tail protein	tail	A0A0F6N3M1	Staphylococcus_phage	100.0	0.0e+00
WP_001836235.1|872688_874599_+	hypothetical protein	NA	A0A0F6N4K2	Staphylococcus_phage	100.0	0.0e+00
WP_000634521.1|874598_876422_+|plate	phage baseplate upper protein	plate	A0A0F6N3G2	Staphylococcus_phage	100.0	0.0e+00
WP_000705896.1|876421_876799_+	DUF2977 domain-containing protein	NA	A0A0F6N3G4	Staphylococcus_phage	100.0	1.5e-60
WP_000782200.1|876802_876976_+	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000466777.1|877015_877315_+	DUF2951 domain-containing protein	NA	A0A0F6N3M6	Staphylococcus_phage	100.0	9.9e-47
WP_001836236.1|877451_879350_+	glucosaminidase domain-containing protein	NA	A0A0F6N4K6	Staphylococcus_phage	100.0	0.0e+00
WP_000276662.1|879362_880601_+|plate	BppU family phage baseplate upper protein	plate	A0A0F6N3G7	Staphylococcus_phage	100.0	1.6e-210
WP_000398872.1|880606_881002_+	hypothetical protein	NA	A0A0F6N3G8	Staphylococcus_phage	100.0	1.2e-68
WP_000351119.1|881057_881333_+|holin	phage holin	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
WP_001141517.1|881319_882732_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0F6N3N1	Staphylococcus_phage	100.0	5.8e-286
WP_001035620.1|882791_883349_-	DUF4888 domain-containing protein	NA	A0A0F6N4L1	Staphylococcus_phage	100.0	7.4e-96
WP_001788502.1|883723_883876_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_000139423.1|883946_884057_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_001286805.1|884058_884244_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
>prophage 4
NZ_CP035101	Staphylococcus aureus subsp. aureus strain ATCC 12600 chromosome, complete genome	2755072	1040906	1049379	2755072		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|1040906_1041389_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_002871056.1|1041375_1042500_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|1042503_1043208_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|1043207_1043471_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|1043472_1044144_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032727.1|1044136_1046326_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
WP_000483713.1|1046304_1047789_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000030812.1|1047781_1048810_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
WP_000238664.1|1048812_1049379_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 5
NZ_CP035101	Staphylococcus aureus subsp. aureus strain ATCC 12600 chromosome, complete genome	2755072	1588084	1596396	2755072	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1588084_1588870_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924214.1|1588995_1589886_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062180.1|1589895_1591242_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
WP_000683931.1|1591355_1592456_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_000624584.1|1592458_1593136_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1593266_1594373_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217261.1|1594596_1596396_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 6
NZ_CP035101	Staphylococcus aureus subsp. aureus strain ATCC 12600 chromosome, complete genome	2755072	1665534	1674577	2755072	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1665534_1666053_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000594993.1|1666074_1668348_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
WP_000749795.1|1668550_1670830_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1671104_1671365_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1671383_1672523_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019172.1|1672545_1673571_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|1673572_1674577_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 7
NZ_CP035101	Staphylococcus aureus subsp. aureus strain ATCC 12600 chromosome, complete genome	2755072	1807063	1881315	2755072	protease,tRNA,transposase	Staphylococcus_phage(93.22%)	75	NA	NA
WP_001108732.1|1807063_1809478_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
WP_001025061.1|1809768_1810950_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_000526539.1|1811059_1812013_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1812009_1812573_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1812692_1813094_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1814672_1815500_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1815502_1815622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|1815733_1816735_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008551.1|1816856_1817321_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159022.1|1817333_1818515_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_000493892.1|1818525_1819158_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_000077344.1|1819164_1820208_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	6.3e-197
WP_001261681.1|1820688_1822191_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_000221179.1|1822713_1823028_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
WP_000989123.1|1823027_1824320_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.3	1.9e-227
WP_000163235.1|1824337_1824733_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
WP_001032833.1|1825027_1825882_-	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1826157_1826382_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671063.1|1826580_1827051_+	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	3.3e-81
WP_001153742.1|1827163_1827607_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030465.1|1827593_1828037_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
WP_001168904.1|1828332_1828968_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1829407_1830121_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091445.1|1830380_1830683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1830938_1831304_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623471.1|1831300_1831654_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_000453320.1|1833737_1834571_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
WP_000366154.1|1834782_1835691_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
WP_000933822.1|1835815_1837009_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109906.1|1837379_1838972_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_000093392.1|1839107_1839593_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_002868962.1|1839967_1840714_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
WP_000672014.1|1840718_1841192_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_000718107.1|1841257_1841515_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778523.1|1841511_1842513_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
WP_000348360.1|1842517_1843996_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
WP_011443643.1|1844154_1844610_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	3.0e-79
WP_001795535.1|1844912_1845563_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	2.7e-44
WP_000070653.1|1845643_1846639_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
WP_000669046.1|1846714_1847341_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
WP_000627551.1|1847381_1847726_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
WP_000414205.1|1847823_1848375_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
WP_000494956.1|1848592_1849234_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
WP_000809857.1|1849347_1849533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000375476.1|1849534_1849711_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000070812.1|1849721_1850105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001549059.1|1850708_1850852_-|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
WP_001801861.1|1851054_1851150_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001791893.1|1851272_1851374_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001037045.1|1851721_1852099_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000831218.1|1852618_1856731_-	ATP-binding protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	0.0e+00
WP_000072624.1|1857580_1858780_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	100.0	8.5e-230
WP_001793440.1|1858772_1860512_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	2.4e-289
WP_001791797.1|1860492_1860627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038688.1|1860691_1861411_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
WP_001038759.1|1861561_1862278_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
WP_011447030.1|1862379_1862487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038704.1|1862435_1863155_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_001836279.1|1863275_1863995_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	2.1e-130
WP_001039447.1|1864052_1864775_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
WP_001836281.1|1864899_1865607_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	99.6	1.7e-129
WP_001092763.1|1866570_1867137_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
WP_000586140.1|1867610_1868309_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
WP_000581552.1|1868305_1869067_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
WP_001096791.1|1869063_1869756_-	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
WP_000691541.1|1869778_1871152_-	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
WP_000504439.1|1871161_1871680_-	enterotoxin	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
WP_000566596.1|1871695_1872940_-	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
WP_001092605.1|1872932_1875926_-	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
WP_000416756.1|1875990_1876134_-	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
WP_000416759.1|1876870_1877014_-	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
WP_000782464.1|1877255_1878239_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
WP_000878802.1|1878240_1879161_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	2.3e-174
WP_001790220.1|1879974_1880514_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	2.0e-61
WP_000206350.1|1880526_1881315_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
>prophage 1
NZ_CP035102	Staphylococcus aureus subsp. aureus strain ATCC 12600 plasmid unnamed, complete sequence	27489	8559	17470	27489	transposase	Staphylococcus_phage(57.14%)	10	NA	NA
WP_000358995.1|8559_8955_-	thioredoxin-dependent arsenate reductase	NA	A0A2H4PQT9	Staphylococcus_phage	86.3	8.5e-62
WP_001834181.1|8972_10265_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	81.4	3.0e-188
WP_000120605.1|10261_10576_-	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	A0A2H4PQT4	Staphylococcus_phage	73.1	4.7e-39
WP_000633163.1|10636_10972_-	recombinase family protein	NA	NA	NA	NA	NA
WP_001035802.1|11291_11504_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001105942.1|11538_12213_-|transposase	IS6-like element ISSau6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	88.4	1.3e-113
WP_000361064.1|12307_12685_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000159128.1|12922_13288_+	winged helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	47.8	8.5e-24
WP_000378396.1|13280_15461_+	cadmium-translocating P-type ATPase CadA	NA	E4ZFI9	Streptococcus_phage	63.7	9.3e-251
WP_000277738.1|15823_17470_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	98.4	1.0e-289
