The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP025448	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76336 chromosome, complete genome	4762736	929962	939310	4762736	protease,integrase	Dickeya_phage(16.67%)	9	931213:931227	944874:944888
WP_001201750.1|929962_931081_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
WP_000125885.1|931077_933024_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	41.9	2.0e-39
931213:931227	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
WP_000447499.1|933153_933375_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000520789.1|933698_934019_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000934057.1|934049_936326_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	1.1e-164
WP_071591100.1|936521_936851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001747668.1|936822_937299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001117984.1|938573_938771_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001747671.1|938932_939310_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	40.2	1.0e-19
944874:944888	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
>prophage 2
NZ_CP025448	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76336 chromosome, complete genome	4762736	1083549	1120785	4762736	transposase,plate	Enterobacteria_phage(20.0%)	29	NA	NA
WP_100148601.1|1083549_1084805_-|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	33.9	2.4e-17
WP_000623370.1|1085085_1085544_-	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_001227394.1|1085667_1086039_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001022123.1|1086047_1086488_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000928422.1|1086507_1087020_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001216386.1|1087060_1087507_-	DUF1240 domain-containing protein	NA	NA	NA	NA	NA
WP_006496204.1|1087535_1087667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001139255.1|1089951_1090794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000002328.1|1090817_1091297_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_000076070.1|1091315_1092677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001137105.1|1092687_1096149_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_000365805.1|1096227_1097640_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_000089147.1|1097641_1098379_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_000614296.1|1098375_1101111_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	31.5	2.9e-84
WP_000343978.1|1101123_1101882_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_000246455.1|1101886_1103218_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_130549539.1|1103220_1103724_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_000796942.1|1103750_1105037_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_000509052.1|1105061_1106150_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_000393863.1|1106113_1107967_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_000611701.1|1107971_1108388_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_001747654.1|1108384_1109857_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_000524265.1|1109905_1110118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000031252.1|1110147_1110651_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_001142966.1|1111279_1111798_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_000103453.1|1112020_1114162_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	25.4	2.9e-23
WP_000014621.1|1114230_1118397_+	RHS repeat protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	40.6	1.4e-21
WP_000739389.1|1118464_1119430_+	Sel1 repeat protein	NA	NA	NA	NA	NA
WP_109188131.1|1119623_1120785_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.8	1.2e-47
>prophage 3
NZ_CP025448	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76336 chromosome, complete genome	4762736	2127327	2137834	4762736		Enterobacteria_phage(37.5%)	10	NA	NA
WP_000126349.1|2127327_2128641_-	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
WP_000565903.1|2128667_2129747_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.7e-16
WP_000648785.1|2129751_2130525_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000018219.1|2130540_2131515_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_000973710.1|2131520_2132072_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.6	1.3e-52
WP_000857531.1|2132072_2132951_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.5	2.1e-108
WP_001023665.1|2132998_2133898_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	1.1e-29
WP_000697849.1|2133897_2134983_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.6	1.0e-101
WP_000981469.1|2135359_2136253_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_001111843.1|2136430_2137834_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	3.1e-21
>prophage 4
NZ_CP025448	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76336 chromosome, complete genome	4762736	2213864	2223035	4762736	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000195330.1|2213864_2215898_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
WP_000703143.1|2216138_2216597_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	71.9	2.4e-52
WP_001197951.1|2216768_2217299_+	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000950413.1|2217355_2217823_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_000598637.1|2217869_2218589_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272851.1|2218585_2220271_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	6.2e-279
WP_001240418.1|2220493_2221225_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_001261696.1|2221284_2221392_+	protein YohO	NA	NA	NA	NA	NA
WP_000824850.1|2221372_2222104_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569166.1|2222087_2223035_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
>prophage 5
NZ_CP025448	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76336 chromosome, complete genome	4762736	2692496	2789826	4762736	capsid,plate,tRNA,lysis,tail,terminase,integrase,head,portal	Salmonella_phage(73.08%)	90	2771521:2771536	2799415:2799430
WP_000083343.1|2692496_2693234_-|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	tRNA	NA	NA	NA	NA
WP_000219174.1|2693364_2694699_+	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	29.7	1.6e-43
WP_001747585.1|2694716_2695616_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000188414.1|2695718_2696306_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
WP_000627811.1|2696367_2696751_-	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	74.0	6.1e-33
WP_000179975.1|2697069_2697759_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	50.0	2.1e-55
WP_000997368.1|2697874_2698912_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_001098732.1|2699115_2699535_+	thioredoxin TrxC	NA	A0A0K2FIM3	Achromobacter_phage	40.6	1.2e-16
WP_000183644.1|2699607_2700288_+	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_000082651.1|2700341_2703002_+	protein lysine acetyltransferase	NA	NA	NA	NA	NA
WP_000949286.1|2703116_2704472_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001264468.1|2704514_2704838_+	YfiM family lipoprotein	NA	NA	NA	NA	NA
WP_000807814.1|2704834_2706136_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	30.1	3.4e-43
WP_000985658.1|2706239_2706695_-	DUF4385 domain-containing protein	NA	E3SMI8	Prochlorococcus_phage	49.3	8.6e-34
WP_001235092.1|2712750_2715324_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.5	2.6e-127
WP_000992634.1|2715453_2716185_-	polyphenol oxidase	NA	NA	NA	NA	NA
WP_000079130.1|2716181_2717162_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_000197660.1|2717293_2718031_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_000178449.1|2718302_2718641_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_010989056.1|2718744_2718792_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000200080.1|2718891_2720052_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_000210991.1|2720012_2720921_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_000225191.1|2720978_2722100_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_001168062.1|2722109_2723180_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	2.4e-90
WP_001212379.1|2723619_2724138_+	YfiR family protein	NA	NA	NA	NA	NA
WP_001030981.1|2724130_2725351_+	diguanylate cyclase DgcN	NA	A0A2K8I9Y5	Pseudomonas_phage	36.2	5.8e-08
WP_000065257.1|2725507_2725855_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000469804.1|2725895_2726663_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000043266.1|2726707_2727256_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000256453.1|2727274_2727523_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000460052.1|2727775_2729137_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_001537507.1|2729302_2730094_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_127172650.1|2730113_2731400_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001294018.1|2731520_2732126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001518875.1|2732160_2732751_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_001059155.1|2732874_2733753_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_000880958.1|2733838_2735500_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001203445.1|2735648_2735987_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_001112990.1|2736152_2736443_-	RnfH family protein	NA	NA	NA	NA	NA
WP_000242603.1|2736432_2736909_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_001518569.1|2737058_2737541_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
WP_001237691.1|2738155_2749630_+	biofilm-associated protein BapA	NA	NA	NA	NA	NA
WP_000533865.1|2749694_2751104_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_000196133.1|2751100_2753281_+	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	1.3e-18
WP_072101449.1|2753288_2754452_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000980498.1|2755003_2755222_-	hypothetical protein	NA	Q53ZE7	Salmonella_virus	100.0	2.1e-38
WP_006501166.1|2755290_2756391_-	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	95.6	9.0e-194
WP_000980409.1|2756387_2756873_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	99.2	8.3e-67
WP_006501165.1|2756869_2759677_-|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	98.3	0.0e+00
WP_000763316.1|2759669_2759789_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	100.0	1.8e-15
WP_001280962.1|2759803_2760106_-|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	100.0	2.5e-45
WP_001207653.1|2760160_2760676_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	99.4	2.7e-92
WP_006501164.1|2760685_2761858_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.5	3.7e-222
WP_006501163.1|2761960_2762518_-	serine-type DNA invertase Fin	NA	A0A1S6L009	Salmonella_phage	98.9	9.4e-99
WP_006501158.1|2763299_2763917_+|tail	tail fiber assembly protein	tail	A0A1B0VCD0	Salmonella_phage	84.1	1.6e-94
WP_001287104.1|2763920_2764328_-|tail	tail assembly protein	tail	A0A1B0V844	Salmonella_phage	85.2	6.7e-62
WP_001086802.1|2766134_2766740_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	98.5	1.1e-116
WP_006493508.1|2766732_2767641_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	97.7	7.2e-157
WP_006493507.1|2767627_2767987_-|plate	baseplate assembly protein W	plate	E5G6N7	Salmonella_phage	92.4	6.3e-56
WP_000993750.1|2767983_2768562_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	99.0	1.5e-107
WP_000343939.1|2768630_2769077_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	89.7	3.8e-66
WP_001039964.1|2769069_2769501_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	95.1	4.0e-73
WP_001648763.1|2769596_2770025_-|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	95.0	2.6e-64
WP_000871620.1|2770021_2770396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006493502.1|2770400_2770910_-	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	97.6	3.2e-93
WP_000171565.1|2770890_2771106_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	100.0	5.9e-33
WP_000868184.1|2771109_2771313_-|tail	tail protein X	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
WP_000673541.1|2771312_2771777_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	96.8	7.9e-83
2771521:2771536	attL	TTGCCGTCCAGCATAT	NA	NA	NA	NA
WP_000059169.1|2771870_2772521_-	hypothetical protein	NA	A0A1S6KZX1	Salmonella_phage	98.6	1.6e-113
WP_000730754.1|2772524_2773592_-|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	98.0	2.8e-192
WP_006493498.1|2773608_2774442_-|capsid	GPO family capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	97.1	1.1e-127
WP_006493495.1|2774584_2776351_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	96.6	0.0e+00
WP_006493493.1|2776350_2777385_+|portal	phage portal protein	portal	E5G6M3	Salmonella_phage	94.8	4.1e-188
WP_006493491.1|2777431_2778349_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_006493490.1|2778311_2779514_-	DNA cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	37.1	5.6e-64
WP_001749760.1|2779844_2780033_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	91.7	5.7e-24
WP_001749759.1|2780170_2780398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006493489.1|2780417_2782811_-	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	88.8	0.0e+00
WP_006493488.1|2782807_2783665_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	69.8	4.6e-113
WP_000785514.1|2783661_2783889_-	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	66.7	5.4e-21
WP_001178763.1|2783888_2784116_-	DUF2732 domain-containing protein	NA	A0A0M3UL87	Salmonella_phage	64.0	8.1e-17
WP_000963476.1|2784183_2784525_-	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	84.1	6.0e-48
WP_001528723.1|2784488_2784683_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	84.1	5.3e-25
WP_000794278.1|2784767_2785043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006493486.1|2785129_2785639_-	phage regulatory CII family protein	NA	A0A1S6L008	Salmonella_phage	93.5	3.5e-84
WP_000102106.1|2785671_2785914_-	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	98.8	2.3e-38
WP_023136550.1|2786033_2786666_+	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	96.7	5.8e-113
WP_006493482.1|2786667_2787684_+|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	95.0	5.0e-191
WP_006493480.1|2787690_2788917_+	hypothetical protein	NA	E5G6K9	Salmonella_phage	65.4	3.6e-151
WP_001650427.1|2789244_2789826_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A1B5FPC6	Escherichia_phage	55.8	1.5e-51
2799415:2799430	attR	ATATGCTGGACGGCAA	NA	NA	NA	NA
>prophage 6
NZ_CP025448	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76336 chromosome, complete genome	4762736	4302951	4323373	4762736	tail,plate	Burkholderia_phage(45.0%)	25	NA	NA
WP_000587738.1|4302951_4303680_-	hypothetical protein	NA	A0A077SLK3	Escherichia_phage	37.3	5.6e-35
WP_000084338.1|4304417_4304873_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023785434.1|4304869_4305475_-	DUF4376 domain-containing protein	NA	NA	NA	NA	NA
WP_001747515.1|4305479_4307225_-|tail	tail protein	tail	A0A0M3ULF6	Salmonella_phage	51.7	1.2e-51
WP_000359502.1|4307227_4307860_-|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	1.1e-23
WP_000951740.1|4307852_4308968_-|plate	baseplate protein	plate	Q6QI99	Burkholderia_phage	51.2	2.9e-99
WP_001093501.1|4308958_4309318_-|plate	baseplate protein	plate	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
WP_000632050.1|4309481_4311029_-	hypothetical protein	NA	B9UDL6	Salmonella_phage	29.9	2.5e-48
WP_000703629.1|4311028_4311958_-	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	84.1	7.9e-151
WP_000593184.1|4311954_4312317_-	GtrA family protein	NA	U5P0S6	Shigella_phage	70.8	9.6e-44
WP_000679392.1|4312644_4313367_-|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	3.9e-12
WP_000818151.1|4313376_4314420_-	phage late control D family protein	NA	Q6QIA2	Burkholderia_phage	45.3	8.5e-77
WP_001269716.1|4314407_4314617_-	membrane protein	NA	A4JWL2	Burkholderia_virus	60.3	9.8e-17
WP_000271418.1|4314616_4315570_-	chemotaxis protein	NA	A4JWL1	Burkholderia_virus	50.8	3.9e-36
WP_001262488.1|4315569_4317924_-|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.6	3.1e-66
WP_001185654.1|4318020_4318149_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_001003644.1|4318108_4318426_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_000907494.1|4318477_4319002_-|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
WP_000729845.1|4319001_4320429_-|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	71.6	2.8e-195
WP_000875314.1|4320418_4320616_-	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
WP_000449437.1|4320612_4321068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000777266.1|4321226_4321541_-	membrane protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
WP_001270445.1|4321553_4322159_-	transglycosylase SLT domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	61.0	5.9e-62
WP_001226439.1|4322161_4322449_-	membrane protein	NA	Q6QIC8	Burkholderia_phage	48.1	3.0e-16
WP_000615248.1|4323025_4323373_+	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
>prophage 7
NZ_CP025448	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76336 chromosome, complete genome	4762736	4599291	4643672	4762736	integrase,transposase,tRNA,tail	Enterobacteria_phage(18.18%)	47	4625089:4625104	4641636:4641651
WP_000252549.1|4599291_4599738_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000047544.1|4599812_4600199_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA	NA
WP_000148570.1|4600275_4600737_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_000013055.1|4600749_4601685_-	aspartate carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	39.2	6.5e-52
WP_000249504.1|4601720_4601822_-	pyr operon leader peptide	NA	NA	NA	NA	NA
WP_001518160.1|4601801_4601942_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000666051.1|4601911_4602400_-	arginine repressor	NA	NA	NA	NA	NA
WP_000514438.1|4602586_4603990_-	YfcC family protein	NA	NA	NA	NA	NA
WP_000237031.1|4604045_4605050_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_000428749.1|4605161_4606094_-	carbamate kinase	NA	NA	NA	NA	NA
WP_000410847.1|4606104_4607325_-	arginine deiminase	NA	NA	NA	NA	NA
WP_000583453.1|4608000_4608453_+	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA	NA
WP_000103041.1|4608526_4609531_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_000002940.1|4609696_4610113_+	ribonuclease E inhibitor RraB	NA	NA	NA	NA	NA
WP_000218447.1|4610124_4610937_+|tRNA	tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE	tRNA	NA	NA	NA	NA
WP_000826193.1|4611181_4611670_-	DUF3617 domain-containing protein	NA	NA	NA	NA	NA
WP_001747736.1|4611777_4612281_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001066989.1|4612475_4613663_+	DUF898 domain-containing protein	NA	NA	NA	NA	NA
WP_000416337.1|4613804_4616660_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.4	9.3e-142
WP_000190703.1|4616659_4617142_-	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_000397158.1|4617239_4618751_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	38.7	8.3e-49
WP_000584132.1|4619144_4620245_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_001182242.1|4620244_4621327_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_001244060.1|4621522_4622521_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_001128356.1|4622584_4623904_-	gnt-II system L-idonate transporter	NA	NA	NA	NA	NA
WP_000998688.1|4623965_4624730_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_000453362.1|4624754_4625786_-	L-idonate 5-dehydrogenase	NA	NA	NA	NA	NA
4625089:4625104	attL	TTTTCTGCTTTCCAGC	NA	NA	NA	NA
WP_000896759.1|4626002_4626533_+	gluconokinase	NA	NA	NA	NA	NA
WP_000152567.1|4626560_4627580_-	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L7I1	Tupanvirus	30.5	3.9e-42
WP_000772651.1|4628051_4629314_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	Q7M297	Enterobacteria_phage	35.6	2.8e-66
WP_001066528.1|4629344_4629983_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000455466.1|4630353_4630584_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_071591111.1|4630645_4631230_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
WP_001247004.1|4631222_4631582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001027149.1|4631613_4631898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001075576.1|4631894_4632278_+	DUF5375 family protein	NA	NA	NA	NA	NA
WP_000211874.1|4632274_4634947_+	DUF927 domain-containing protein	NA	A0A1B0VP75	Pseudomonas_phage	34.4	2.1e-58
WP_001066192.1|4635347_4636109_+	septation initiation protein	NA	NA	NA	NA	NA
WP_001185338.1|4636108_4636381_+	ogr/Delta-like zinc finger family protein	NA	A0A2I8TV89	Erwinia_phage	46.9	6.3e-08
WP_006501160.1|4636558_4636738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001292737.1|4636757_4637069_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	66.0	2.4e-27
WP_001747644.1|4637083_4637203_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
WP_001280979.1|4637195_4639829_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	31.3	5.8e-106
WP_000254751.1|4641130_4641379_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_000016244.1|4641487_4641727_+	type II toxin-antitoxin system CcdA family antitoxin	NA	NA	NA	NA	NA
4641636:4641651	attR	GCTGGAAAGCAGAAAA	NA	NA	NA	NA
WP_001199743.1|4641729_4642038_+	CcdB family protein	NA	NA	NA	NA	NA
WP_096322988.1|4642417_4643672_+|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	2.2e-18
