The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP031174	Lactobacillus brevis strain UCCLB556 chromosome, complete genome	2375367	1199729	1208961	2375367	tRNA	Staphylococcus_phage(42.86%)	9	NA	NA
WP_015473763.1|1199729_1200581_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	33.6	1.7e-14
WP_024855006.1|1200749_1201391_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_024855005.1|1201546_1202038_-	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	37.8	1.5e-23
WP_015473768.1|1202054_1203005_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	62.1	2.0e-117
WP_011667557.1|1203016_1204909_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	29.3	6.1e-49
WP_024855004.1|1204937_1206131_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	G3MAR3	Bacillus_virus	40.2	1.9e-35
WP_011667555.1|1206264_1207203_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	38.8	2.2e-52
WP_139588296.1|1207320_1208580_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_011667553.1|1208685_1208961_-	HU family DNA-binding protein	NA	A0A0H3UZA0	Geobacillus_virus	68.5	3.1e-26
>prophage 2
NZ_CP031174	Lactobacillus brevis strain UCCLB556 chromosome, complete genome	2375367	1257006	1305995	2375367	tRNA,tail,holin,transposase,portal,plate	Lactobacillus_phage(45.45%)	54	NA	NA
WP_011667510.1|1257006_1258809_-|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_011667509.1|1258822_1260118_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_114639862.1|1260425_1260968_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011667506.1|1261136_1261988_+	SH3 domain-containing protein	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	37.3	1.1e-18
WP_011667505.1|1262008_1262854_+	fructosamine kinase family protein	NA	NA	NA	NA	NA
WP_015473804.1|1262908_1263550_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_024854988.1|1263661_1264105_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_024854987.1|1264124_1266359_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	S4TRQ0	Salmonella_phage	43.6	6.2e-08
WP_011667501.1|1266387_1266723_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011667500.1|1266790_1267543_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_011667499.1|1267545_1268496_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_139588297.1|1268598_1268916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011667497.1|1269255_1269639_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_015473808.1|1269862_1270225_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011667495.1|1270721_1270973_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024854985.1|1271474_1272656_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011667492.1|1273274_1273634_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080680645.1|1273676_1273868_-	DUF3923 family protein	NA	NA	NA	NA	NA
WP_015473995.1|1273961_1274987_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.6	2.9e-45
WP_080504809.1|1275238_1275340_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_024854983.1|1276707_1276959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024854982.1|1277044_1278034_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	40.5	7.6e-59
WP_024854981.1|1278542_1278947_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_021742229.1|1278964_1279384_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_024854980.1|1279399_1279582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024854979.1|1279600_1280146_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA	NA
WP_021742232.1|1280158_1280416_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_024854978.1|1280652_1281705_-	lysozyme M1 (1,4-beta-N-acetylmuramidase)	NA	D6PSS2	Lactobacillus_phage	81.4	2.5e-153
WP_015474081.1|1282217_1282622_-|holin	phage holin family protein	holin	A0A097BY69	Enterococcus_phage	41.4	1.7e-17
WP_024855663.1|1283007_1283460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855662.1|1283472_1285212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855661.1|1285228_1285942_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855660.1|1285934_1287083_-|plate	baseplate J/gp47 family protein	plate	A0A2H4J8D2	uncultured_Caudovirales_phage	32.6	2.5e-45
WP_024855659.1|1287066_1287453_-	DUF2634 domain-containing protein	NA	NA	NA	NA	NA
WP_024855658.1|1287442_1287856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855657.1|1287864_1289118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855656.1|1289117_1289588_-	hypothetical protein	NA	D6PSZ5	Lactobacillus_phage	35.7	3.1e-10
WP_024855655.1|1289602_1290580_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855654.1|1290639_1296516_-|tail	phage tail tape measure protein	tail	D6PSZ2	Lactobacillus_phage	64.1	1.5e-61
WP_099963031.1|1296508_1296751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855653.1|1296716_1297148_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855652.1|1297193_1297607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080680658.1|1297622_1298849_-	DUF3383 family protein	NA	NA	NA	NA	NA
WP_024855650.1|1298751_1299240_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855649.1|1299226_1299616_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139588298.1|1299608_1300094_-	hypothetical protein	NA	D6PSY0	Lactobacillus_phage	45.2	6.8e-29
WP_024855647.1|1300219_1300558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855646.1|1300569_1300749_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_139588299.1|1300764_1301268_-	fibronectin type III domain-containing protein	NA	NA	NA	NA	NA
WP_024855644.1|1301350_1302508_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855643.1|1302520_1302901_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855642.1|1302912_1303422_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855641.1|1303434_1304364_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855640.1|1304363_1305995_-|portal	phage portal protein	portal	A0A0A1ER87	Lactobacillus_phage	30.9	2.8e-42
>prophage 3
NZ_CP031174	Lactobacillus brevis strain UCCLB556 chromosome, complete genome	2375367	1313054	1321251	2375367		Lactobacillus_phage(75.0%)	15	NA	NA
WP_139588301.1|1313054_1313522_-	transcriptional regulator	NA	D6PSV8	Lactobacillus_phage	88.4	5.5e-76
WP_024855629.1|1313726_1314155_-	hypothetical protein	NA	D6PSU8	Lactobacillus_phage	61.0	1.9e-22
WP_024855628.1|1314270_1314714_-	RusA family crossover junction endodeoxyribonuclease	NA	D6PSU4	Lactobacillus_phage	89.3	3.9e-63
WP_024855627.1|1314706_1315417_-	toxin Bro	NA	U5U413	Lactobacillus_phage	44.8	9.7e-32
WP_024855626.1|1315413_1316355_-	DUF4373 domain-containing protein	NA	D6PSU3	Lactobacillus_phage	78.9	1.6e-13
WP_024855625.1|1316366_1317230_-	hypothetical protein	NA	A0A0P0IZH9	Lactobacillus_phage	50.0	4.6e-76
WP_024855624.1|1317156_1318215_-	recombinase RecT	NA	D7RWF9	Brochothrix_phage	50.4	4.0e-58
WP_015474119.1|1318215_1318431_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855623.1|1318421_1318715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855622.1|1319013_1319277_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_024855621.1|1319261_1319816_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855620.1|1319876_1320101_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024855619.1|1320149_1320335_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021742303.1|1320467_1320716_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_024855618.1|1320882_1321251_+	helix-turn-helix transcriptional regulator	NA	A8ATX5	Listeria_phage	38.4	1.7e-08
>prophage 4
NZ_CP031174	Lactobacillus brevis strain UCCLB556 chromosome, complete genome	2375367	1328294	1339317	2375367	transposase	Streptococcus_phage(16.67%)	9	NA	NA
WP_011667997.1|1328294_1330127_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	27.5	8.6e-24
WP_024855607.1|1330307_1331597_-	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA	NA
WP_011667999.1|1331600_1331834_-	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA	NA
WP_011668000.1|1331871_1333080_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	27.8	1.1e-22
WP_011668001.1|1333079_1334606_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	27.9	5.7e-37
WP_011668002.1|1334645_1334795_-	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_015473995.1|1335085_1336111_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.6	2.9e-45
WP_024855606.1|1336192_1337341_-	molecular chaperone DnaJ	NA	M1PC06	Moumouvirus	28.3	3.2e-16
WP_011668004.1|1337457_1339317_-	molecular chaperone DnaK	NA	A0A2P1EIW2	Megavirus	46.2	2.8e-131
