assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006337345.1_ASM633734v1	NZ_CP032477	Helicobacter pylori strain 169-C-EK8 chromosome, complete genome	1	560012-560135	1	CRISPRCasFinder	no		DEDDh,cas3,cas2,csx1	Orphan	CTGAAGAAATCATTTCAAAAAAACAAGAAGAATT	34	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,cas2,csx1	NA|113aa|up_0|NZ_CP032477.1_559280_559619_+,NA	NA|181aa|up_9|NZ_CP032477.1_552912_553455_+	TIGR03585, PseH, UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	NA|313aa|up_8|NZ_CP032477.1_553387_554326_-	COG1663, LpxK, Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]	NA|261aa|up_7|NZ_CP032477.1_554322_555105_-	PRK13980, PRK13980, NAD synthetase; Provisional	NA|331aa|up_6|NZ_CP032477.1_555353_556346_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|269aa|up_5|NZ_CP032477.1_556369_557176_+	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]	NA|78aa|up_4|NZ_CP032477.1_557172_557406_+	TIGR01215, Cell_division_topological_specificity_factor, cell division topological specificity factor MinE	NA|267aa|up_3|NZ_CP032477.1_557412_558213_+	TIGR00732, Protein_smf, DNA protecting protein DprA	NA|135aa|up_2|NZ_CP032477.1_558209_558614_+	PRK00109, PRK00109, Holliday junction resolvase RuvX	NA|117aa|up_1|NZ_CP032477.1_558743_559094_+	sd00010, SLR, Sel1-like repeat	NA|113aa|up_0|NZ_CP032477.1_559280_559619_+	NA	NA|125aa|down_0|NZ_CP032477.1_560219_560594_+	cd00735, T4-like_lys, bacteriophage T4-like lysozymes	NA|131aa|down_1|NZ_CP032477.1_561149_561542_+	COG3326, COG3326, Predicted membrane protein [Function unknown]	NA|299aa|down_2|NZ_CP032477.1_563469_564366_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|517aa|down_3|NZ_CP032477.1_564365_565916_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|539aa|down_4|NZ_CP032477.1_565924_567541_-	PRK05380, pyrG, CTP synthetase; Validated	NA|222aa|down_5|NZ_CP032477.1_567797_568463_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|568aa|down_6|NZ_CP032477.1_568506_570210_+	TIGR00206, Flagellar_M-ring_protein, flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)	NA|344aa|down_7|NZ_CP032477.1_570227_571259_+	TIGR00207, Flagellar_motor_switch_protein_FliG, flagellar motor switch protein FliG	NA|260aa|down_8|NZ_CP032477.1_571245_572025_+	PRK06669, fliH, flagellar assembly protein H; Validated	NA|619aa|down_9|NZ_CP032477.1_572021_573878_+	TIGR00204, 1-deoxy-D-xylulose-5-phosphate_synthase, 1-deoxy-D-xylulose-5-phosphate synthase
GCF_006337345.1_ASM633734v1	NZ_CP032477	Helicobacter pylori strain 169-C-EK8 chromosome, complete genome	2	913013-913113	2	CRISPRCasFinder	no		DEDDh,cas3,cas2,csx1	Orphan	TTTTCTTTAATTTCTTTTTCTTT	23	1	2	913075-913090|913075-913090	NZ_CP032477.1_913105-913120|NZ_CP032477.1_28028-28013	NA	2	2	Orphan	DEDDh,cas3,cas2,csx1	NA|115aa|up_7|NZ_CP032477.1_904714_905059_+,NA|306aa|down_6|NZ_CP032477.1_921801_922719_-,NA|356aa|down_9|NZ_CP032477.1_924816_925884_-	NA|274aa|up_9|NZ_CP032477.1_902767_903589_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|309aa|up_8|NZ_CP032477.1_903767_904694_+	pfam01795, Methyltransf_5, MraW methylase family	NA|115aa|up_7|NZ_CP032477.1_904714_905059_+	NA	NA|301aa|up_6|NZ_CP032477.1_905257_906160_+	COG1912, COG1912, Uncharacterized conserved protein [Function unknown]	NA|655aa|up_5|NZ_CP032477.1_906430_908395_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|407aa|up_4|NZ_CP032477.1_908600_909821_+	COG4940, ComGF, Competence protein ComGF [Intracellular trafficking and secretion]	NA|67aa|up_3|NZ_CP032477.1_910326_910527_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|415aa|up_2|NZ_CP032477.1_910538_911783_-	PRK05932, PRK05932, RNA polymerase factor sigma-54; Reviewed	NA|241aa|up_1|NZ_CP032477.1_911785_912508_-	COG1137, YhbG, ABC-type (unclassified) transport system, ATPase component [General function prediction only]	NA|134aa|up_0|NZ_CP032477.1_912520_912922_-	TIGR00150, Hypothetical_UPF0079_protein_yjeE	NA|211aa|down_0|NZ_CP032477.1_914786_915419_-	TIGR00948, Hypothetical_protein_Rv0488/MT0507/Mb0498	NA|141aa|down_1|NZ_CP032477.1_915678_916101_+	pfam06518, DUF1104, Protein of unknown function (DUF1104)	NA|154aa|down_2|NZ_CP032477.1_916129_916591_+	pfam06518, DUF1104, Protein of unknown function (DUF1104)	NA|351aa|down_3|NZ_CP032477.1_917086_918139_-	TIGR00520, L-asparaginase_2, L-asparaginase, type II	NA|444aa|down_4|NZ_CP032477.1_918213_919545_+	TIGR00770, Anaerobic_C4-dicarboxylate_transporter_DcuA, anaerobic c4-dicarboxylate membrane transporter family protein	NA|628aa|down_5|NZ_CP032477.1_919620_921504_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|306aa|down_6|NZ_CP032477.1_921801_922719_-	NA	NA|329aa|down_7|NZ_CP032477.1_922688_923675_-	COG0042, COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]	NA|337aa|down_8|NZ_CP032477.1_923764_924775_-	pfam01171, ATP_bind_3, PP-loop family	NA|356aa|down_9|NZ_CP032477.1_924816_925884_-	NA
GCF_006337345.1_ASM633734v1	NZ_CP032477	Helicobacter pylori strain 169-C-EK8 chromosome, complete genome	3	1288646-1288731	3	CRISPRCasFinder	no		DEDDh,cas3,cas2,csx1	Orphan	CATGCGAGAAGTAGTGGTTCAAGAAC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,cas2,csx1	NA|512aa|up_8|NZ_CP032477.1_1278271_1279807_+,NA|436aa|down_0|NZ_CP032477.1_1289971_1291279_+,NA|130aa|down_9|NZ_CP032477.1_1299983_1300373_-	NA|345aa|up_9|NZ_CP032477.1_1276422_1277457_-	TIGR01179, UDP-glucose_4-epimerase, UDP-glucose-4-epimerase GalE	NA|512aa|up_8|NZ_CP032477.1_1278271_1279807_+	NA	NA|254aa|up_7|NZ_CP032477.1_1279827_1280589_+	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|291aa|up_6|NZ_CP032477.1_1280812_1281685_-	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|207aa|up_5|NZ_CP032477.1_1281759_1282380_-	TIGR01182, KHG/KDPG_aldolase_	NA|609aa|up_4|NZ_CP032477.1_1282398_1284225_-	TIGR01196, Phosphogluconate_dehydratase, 6-phosphogluconate dehydratase	NA|426aa|up_3|NZ_CP032477.1_1284290_1285568_+	COG0364, Zwf, Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]	NA|228aa|up_2|NZ_CP032477.1_1285578_1286262_+	TIGR01198, 6-phosphogluconolactonase_6PGL	NA|337aa|up_1|NZ_CP032477.1_1286248_1287259_+	TIGR00749, Glucokinase_Glucose_kinase	NA|349aa|up_0|NZ_CP032477.1_1287419_1288466_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|436aa|down_0|NZ_CP032477.1_1289971_1291279_+	NA	NA|221aa|down_1|NZ_CP032477.1_1291285_1291948_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|187aa|down_2|NZ_CP032477.1_1292227_1292788_+	PRK05844, PRK05844, pyruvate flavodoxin oxidoreductase subunit gamma; Validated	NA|131aa|down_3|NZ_CP032477.1_1292803_1293196_+	PRK09625, porD, pyruvate flavodoxin oxidoreductase subunit delta; Reviewed	NA|408aa|down_4|NZ_CP032477.1_1293205_1294429_+	PRK09622, porA, 2-oxoacid:ferredoxin oxidoreductase subunit alpha	NA|315aa|down_5|NZ_CP032477.1_1294441_1295386_+	cd03376, TPP_PFOR_porB_like, Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	NA|441aa|down_6|NZ_CP032477.1_1295495_1296818_+	PRK08470, PRK08470, adenylosuccinate lyase; Provisional	NA|278aa|down_7|NZ_CP032477.1_1296882_1297716_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|659aa|down_8|NZ_CP032477.1_1297739_1299716_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|130aa|down_9|NZ_CP032477.1_1299983_1300373_-	NA
