assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006338145.1_ASM633814v1	NZ_CP032909	Helicobacter pylori strain 21-A-EK1 chromosome, complete genome	1	349592-349819	1	CRISPRCasFinder	no		cas3,DEDDh	Orphan	CGCTAACAATGAAATAAACACCAAAGAAAC	30	0	0	NA	NA	NA	3	3	Orphan	cas3,DEDDh	NA|69aa|up_8|NZ_CP032909.1_338919_339126_+,NA|145aa|up_5|NZ_CP032909.1_340624_341059_+,NA|67aa|up_1|NZ_CP032909.1_346057_346258_-,NA|436aa|down_8|NZ_CP032909.1_358609_359917_-	NA|186aa|up_9|NZ_CP032909.1_338330_338888_+	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]	NA|69aa|up_8|NZ_CP032909.1_338919_339126_+	NA	NA|77aa|up_7|NZ_CP032909.1_339162_339393_+	pfam04316, FlgM, Anti-sigma-28 factor, FlgM	NA|313aa|up_6|NZ_CP032909.1_339554_340493_+	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm)	NA|145aa|up_5|NZ_CP032909.1_340624_341059_+	NA	NA|607aa|up_4|NZ_CP032909.1_341060_342881_+	PRK08471, flgK, flagellar hook-associated protein FlgK; Validated	NA|568aa|up_3|NZ_CP032909.1_343080_344784_+	TIGR00066, Contains:_Gamma-glutamyltranspeptidase_large_chain, gamma-glutamyltranspeptidase	NA|257aa|up_2|NZ_CP032909.1_345049_345820_+	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|67aa|up_1|NZ_CP032909.1_346057_346258_-	NA	NA|942aa|up_0|NZ_CP032909.1_346226_349052_+	pfam18763, ddrB-ParB, ddrB-like ParB superfamily domain	NA|659aa|down_0|NZ_CP032909.1_350173_352150_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|278aa|down_1|NZ_CP032909.1_352160_352994_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|441aa|down_2|NZ_CP032909.1_353059_354382_-	PRK08470, PRK08470, adenylosuccinate lyase; Provisional	NA|315aa|down_3|NZ_CP032909.1_354491_355436_-	cd03376, TPP_PFOR_porB_like, Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	NA|408aa|down_4|NZ_CP032909.1_355448_356672_-	PRK09622, porA, 2-oxoacid:ferredoxin oxidoreductase subunit alpha	NA|131aa|down_5|NZ_CP032909.1_356681_357074_-	PRK09625, porD, pyruvate flavodoxin oxidoreductase subunit delta; Reviewed	NA|187aa|down_6|NZ_CP032909.1_357089_357650_-	PRK05844, PRK05844, pyruvate flavodoxin oxidoreductase subunit gamma; Validated	NA|221aa|down_7|NZ_CP032909.1_357940_358603_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|436aa|down_8|NZ_CP032909.1_358609_359917_-	NA	NA|399aa|down_9|NZ_CP032909.1_360102_361299_+	COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
GCF_006338145.1_ASM633814v1	NZ_CP032909	Helicobacter pylori strain 21-A-EK1 chromosome, complete genome	2	547061-547137	2	CRISPRCasFinder	no		cas3,DEDDh	Orphan	TCAATCCGCTTTTTAATCTTTAA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh	NA|43aa|up_4|NZ_CP032909.1_540913_541042_+,NA|104aa|down_0|NZ_CP032909.1_547210_547522_+,NA|615aa|down_9|NZ_CP032909.1_558326_560171_+	NA|606aa|up_9|NZ_CP032909.1_533153_534971_-	PRK05841, flgE, flagellar hook protein FlgE; Validated	NA|302aa|up_8|NZ_CP032909.1_534967_535873_-	PRK05842, flgD, flagellar hook assembly protein FlgD	NA|522aa|up_7|NZ_CP032909.1_535923_537489_-	pfam02120, Flg_hook, Flagellar hook-length control protein FliK	NA|203aa|up_6|NZ_CP032909.1_538679_539288_+	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|100aa|up_5|NZ_CP032909.1_540603_540903_+	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain	NA|43aa|up_4|NZ_CP032909.1_540913_541042_+	NA	NA|243aa|up_3|NZ_CP032909.1_541150_541879_+	TIGR00073, nickel_incorporation_protein_HypB, hydrogenase accessory protein HypB	NA|80aa|up_2|NZ_CP032909.1_541878_542118_+	COG0298, HypC, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|371aa|up_1|NZ_CP032909.1_542117_543230_+	PRK15062, PRK15062, hydrogenase isoenzymes formation protein HypD; Provisional	NA|738aa|up_0|NZ_CP032909.1_544217_546431_+	pfam18304, SabA_adhesion, SabA N-terminal extracellular adhesion domain	NA|104aa|down_0|NZ_CP032909.1_547210_547522_+	NA	NA|91aa|down_1|NZ_CP032909.1_547508_547781_+	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown]	NA|175aa|down_2|NZ_CP032909.1_547889_548414_-	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	NA|283aa|down_3|NZ_CP032909.1_548553_549402_+	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|327aa|down_4|NZ_CP032909.1_549394_550375_+	pfam01032, FecCD, FecCD transport family	NA|256aa|down_5|NZ_CP032909.1_550374_551142_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|1314aa|down_6|NZ_CP032909.1_551212_555154_-	pfam02691, VacA, Vacuolating cyotoxin	NA|466aa|down_7|NZ_CP032909.1_555376_556774_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|487aa|down_8|NZ_CP032909.1_556774_558235_-	pfam03023, MVIN, MviN-like protein	NA|615aa|down_9|NZ_CP032909.1_558326_560171_+	NA
