assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006338545.1_ASM633854v1	NZ_CP032912	Helicobacter pylori strain 13-A-EK8 chromosome, complete genome	1	418927-419012	1	CRISPRCasFinder	no		cas2,cas14j,cas3,DEDDh	Orphan	GTTCTTGAACCACTACTTCTCGCATG	26	0	0	NA	NA	NA	1	1	Orphan	cas2,cas14j,cas3,DEDDh	NA|265aa|up_9|NZ_CP032912.1_407089_407884_+,NA|436aa|up_0|NZ_CP032912.1_416391_417699_-,NA|512aa|down_8|NZ_CP032912.1_427827_429363_-	NA|265aa|up_9|NZ_CP032912.1_407089_407884_+	NA	NA|659aa|up_8|NZ_CP032912.1_407953_409930_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|278aa|up_7|NZ_CP032912.1_409940_410774_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|441aa|up_6|NZ_CP032912.1_410842_412165_-	PRK08470, PRK08470, adenylosuccinate lyase; Provisional	NA|315aa|up_5|NZ_CP032912.1_412274_413219_-	cd03376, TPP_PFOR_porB_like, Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	NA|408aa|up_4|NZ_CP032912.1_413231_414455_-	PRK09622, porA, 2-oxoacid:ferredoxin oxidoreductase subunit alpha	NA|131aa|up_3|NZ_CP032912.1_414464_414857_-	PRK09625, porD, pyruvate flavodoxin oxidoreductase subunit delta; Reviewed	NA|187aa|up_2|NZ_CP032912.1_414872_415433_-	PRK05844, PRK05844, pyruvate flavodoxin oxidoreductase subunit gamma; Validated	NA|221aa|up_1|NZ_CP032912.1_415722_416385_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|436aa|up_0|NZ_CP032912.1_416391_417699_-	NA	NA|349aa|down_0|NZ_CP032912.1_419190_420237_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|337aa|down_1|NZ_CP032912.1_420399_421410_-	TIGR00749, Glucokinase_Glucose_kinase	NA|228aa|down_2|NZ_CP032912.1_421396_422080_-	TIGR01198, 6-phosphogluconolactonase_6PGL	NA|426aa|down_3|NZ_CP032912.1_422090_423368_-	COG0364, Zwf, Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]	NA|612aa|down_4|NZ_CP032912.1_423433_425269_+	TIGR01196, Phosphogluconate_dehydratase, 6-phosphogluconate dehydratase	NA|207aa|down_5|NZ_CP032912.1_425279_425900_+	TIGR01182, KHG/KDPG_aldolase_	NA|291aa|down_6|NZ_CP032912.1_425974_426847_+	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|254aa|down_7|NZ_CP032912.1_427048_427810_-	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|512aa|down_8|NZ_CP032912.1_427827_429363_-	NA	NA|345aa|down_9|NZ_CP032912.1_430077_431112_+	TIGR01179, UDP-glucose_4-epimerase, UDP-glucose-4-epimerase GalE
GCF_006338545.1_ASM633854v1	NZ_CP032912	Helicobacter pylori strain 13-A-EK8 chromosome, complete genome	2	636941-637083	2	CRISPRCasFinder	no		cas2,cas14j,cas3,DEDDh	Orphan	TTTAATGGCGGATCGTTTAATTT	23	0	0	NA	NA	NA	2	2	Orphan	cas2,cas14j,cas3,DEDDh	NA|65aa|up_8|NZ_CP032912.1_624238_624433_-,NA|190aa|up_5|NZ_CP032912.1_627163_627733_+,NA|167aa|down_0|NZ_CP032912.1_644422_644923_-,NA|112aa|down_2|NZ_CP032912.1_646174_646510_-	NA|434aa|up_9|NZ_CP032912.1_622190_623492_-	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain	NA|65aa|up_8|NZ_CP032912.1_624238_624433_-	NA	NA|511aa|up_7|NZ_CP032912.1_624812_626345_+	PRK12584, PRK12584, flagellin A; Reviewed	NA|219aa|up_6|NZ_CP032912.1_626462_627119_+	PRK13913, PRK13913, 3-methyladenine DNA glycosylase; Provisional	NA|190aa|up_5|NZ_CP032912.1_627163_627733_+	NA	NA|341aa|up_4|NZ_CP032912.1_627801_628824_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|478aa|up_3|NZ_CP032912.1_628832_630266_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|235aa|up_2|NZ_CP032912.1_630276_630981_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1029aa|up_1|NZ_CP032912.1_630993_634080_+	pfam00873, ACR_tran, AcrB/AcrD/AcrF family	NA|190aa|up_0|NZ_CP032912.1_634076_634646_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|167aa|down_0|NZ_CP032912.1_644422_644923_-	NA	NA|234aa|down_1|NZ_CP032912.1_645178_645880_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|112aa|down_2|NZ_CP032912.1_646174_646510_-	NA	NA|657aa|down_3|NZ_CP032912.1_646631_648602_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|314aa|down_4|NZ_CP032912.1_648678_649620_+	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|578aa|down_5|NZ_CP032912.1_649654_651388_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|192aa|down_6|NZ_CP032912.1_651404_651980_+	PRK00279, adk, adenylate kinase; Reviewed	NA|188aa|down_7|NZ_CP032912.1_652005_652569_+	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane]	NA|277aa|down_8|NZ_CP032912.1_652504_653335_+	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane]	NA|174aa|down_9|NZ_CP032912.1_653386_653908_+	PRK01250, PRK01250, inorganic diphosphatase
GCF_006338545.1_ASM633854v1	NZ_CP032912	Helicobacter pylori strain 13-A-EK8 chromosome, complete genome	3	961156-961344	1	CRT	no		cas2,cas14j,cas3,DEDDh	Orphan	TTCAATCAAGGGACTTAT	18	0	0	NA	NA	I-B	3	3	Orphan	cas2,cas14j,cas3,DEDDh	NA|204aa|up_9|NZ_CP032912.1_941668_942280_+,NA|220aa|down_8|NZ_CP032912.1_974447_975107_+	NA|204aa|up_9|NZ_CP032912.1_941668_942280_+	NA	NA|676aa|up_8|NZ_CP032912.1_943413_945441_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|517aa|up_7|NZ_CP032912.1_946284_947835_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|533aa|up_6|NZ_CP032912.1_947856_949455_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|515aa|up_5|NZ_CP032912.1_950245_951790_-	pfam02521, HP_OMP_2, Putative outer membrane protein	NA|816aa|up_4|NZ_CP032912.1_952037_954485_-	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]	NA|144aa|up_3|NZ_CP032912.1_954668_955100_-	pfam01300, Sua5_yciO_yrdC, Telomere recombination	NA|1086aa|up_2|NZ_CP032912.1_955104_958362_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|231aa|up_1|NZ_CP032912.1_958460_959153_-	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|333aa|up_0|NZ_CP032912.1_959297_960296_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|370aa|down_0|NZ_CP032912.1_967995_969105_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|69aa|down_1|NZ_CP032912.1_969171_969378_-	TIGR00013, Probable_tautomerase_K2, 4-oxalocrotonate tautomerase family enzyme	NA|194aa|down_2|NZ_CP032912.1_969538_970120_+	TIGR00615, Recombination_protein_RecR, recombination protein RecR	NA|382aa|down_3|NZ_CP032912.1_970116_971262_+	TIGR00094, tRNA_pseudouridine_synthase_D, tRNA pseudouridine synthase, TruD family	NA|327aa|down_4|NZ_CP032912.1_971200_972181_+	PRK02870, PRK02870, heat shock protein HtpX; Provisional	NA|181aa|down_5|NZ_CP032912.1_972181_972724_+	TIGR00063, GTP_cyclohydrolase_1, GTP cyclohydrolase I	NA|304aa|down_6|NZ_CP032912.1_972739_973651_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|268aa|down_7|NZ_CP032912.1_973647_974451_+	COG0496, SurE, Predicted acid phosphatase [General function prediction only]	NA|220aa|down_8|NZ_CP032912.1_974447_975107_+	NA	NA|201aa|down_9|NZ_CP032912.1_975110_975713_+	COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism]
