The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	0	11348	2648833		Molluscum_contagiosum_virus(50.0%)	7	NA	NA
WP_002286258.1|1479_1890_+	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA	NA
WP_002286247.1|1903_2260_+	arsenate reductase	NA	NA	NA	NA	NA
WP_002322034.1|4571_4769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289440.1|8014_8485_-	glutathione peroxidase	NA	A0A1S7DM81	Molluscum_contagiosum_virus	26.8	2.7e-06
WP_002289439.1|8643_9102_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_002289438.1|9272_10418_-	cystathionine gamma-synthase	NA	NA	NA	NA	NA
WP_002289436.1|10430_11348_-	cysteine synthase family protein	NA	A0A1W6JHY1	Lactococcus_phage	40.9	8.0e-63
>prophage 2
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	25844	27227	2648833		Streptococcus_phage(100.0%)	1	NA	NA
WP_002286860.1|25844_27227_-	Y-family DNA polymerase	NA	M1Q231	Streptococcus_phage	40.2	3.1e-90
>prophage 3
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	35765	36512	2648833		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002293686.1|35765_36512_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.2	7.3e-14
>prophage 4
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	40746	41355	2648833		Enterococcus_phage(100.0%)	1	NA	NA
WP_002286836.1|40746_41355_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	53.2	2.3e-34
>prophage 5
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	49647	57528	2648833	transposase	Erysipelothrix_phage(25.0%)	10	NA	NA
WP_002286818.1|49647_50979_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	57.6	8.2e-141
WP_002286816.1|51000_51627_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_002286813.1|51809_52391_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002348632.1|52746_52971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002293673.1|52998_53574_+	DUF159 family protein	NA	A0A1P8CX02	Bacillus_phage	32.3	1.3e-07
WP_002286804.1|53778_54117_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002323011.1|54403_54634_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286801.1|54633_54975_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SEX8	Streptococcus_phage	43.5	2.2e-18
WP_002304207.1|55824_56010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086956687.1|56366_57528_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
>prophage 6
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	77215	81554	2648833		Lactobacillus_phage(50.0%)	6	NA	NA
WP_002286766.1|77215_78412_-	toxic anion resistance protein	NA	A0A2K9VCT6	Lactobacillus_phage	29.1	3.9e-33
WP_002286764.1|78535_79198_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002325125.1|79425_79989_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_002286760.1|80001_80286_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139438430.1|80304_80997_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_002291217.1|81008_81554_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	37.4	2.6e-24
>prophage 7
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	85643	93710	2648833		Cafeteria_roenbergensis_virus(25.0%)	7	NA	NA
WP_139438433.1|85643_87551_-	M13 family peptidase	NA	E3T4I7	Cafeteria_roenbergensis_virus	31.4	5.5e-82
WP_002286745.1|87680_88556_+	dihydrolipoamide dehydrogenase	NA	NA	NA	NA	NA
WP_002286741.1|88635_89610_+	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	32.2	2.0e-40
WP_002286738.1|89798_90935_+	cysteine desulfurase	NA	NA	NA	NA	NA
WP_002286736.1|91071_91416_+	DUF1831 domain-containing protein	NA	NA	NA	NA	NA
WP_002337879.1|91686_92973_+	multidrug efflux MFS transporter EfmA	NA	A0A1B0RXG2	Streptococcus_phage	36.4	5.8e-67
WP_002286728.1|93110_93710_-	metallophosphatase	NA	A0A288TXW7	Enterococcus_phage	40.5	1.5e-33
>prophage 8
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	102817	104475	2648833		Oenococcus_phage(50.0%)	2	NA	NA
WP_002289773.1|102817_103765_-	glycosyltransferase family 2 protein	NA	V5USA4	Oenococcus_phage	51.0	5.0e-84
WP_002337876.1|104010_104475_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	38.7	1.5e-17
>prophage 9
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	109384	134983	2648833	bacteriocin,integrase	Streptococcus_phage(18.18%)	26	102750:102775	138495:138520
102750:102775	attL	GGACTGTGACAAGACTTTTGTCACAG	NA	NA	NA	NA
WP_002295166.1|109384_109741_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	42.3	2.7e-22
WP_002291179.1|109742_110081_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
WP_002304234.1|110475_111510_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	35.1	4.2e-28
WP_002287674.1|111502_112189_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002287678.1|112212_113061_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002287679.1|113257_114031_+	Fe-S cluster assembly ATPase SufC	NA	A0A2R8FG22	Brazilian_cedratvirus	28.8	2.1e-08
WP_002287681.1|114043_115330_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_002330031.1|115326_116562_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	48.0	1.8e-113
WP_002287684.1|116548_117019_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_002287686.1|117023_118415_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_002301919.1|118509_119652_-|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	34.5	7.4e-58
WP_002287709.1|119690_120425_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002287723.1|120657_120933_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_025188151.1|121030_123028_+	hypothetical protein	NA	A0A1Z1LZK7	Bacillus_phage	24.3	3.9e-22
WP_002354523.1|123103_123439_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002404111.1|123567_123783_+	helix-turn-helix transcriptional regulator	NA	A0A139ZPI6	Marinitoga_camini_virus	40.0	1.4e-05
WP_025188152.1|123819_124182_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_010822397.1|124227_124554_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025188370.1|125242_126025_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002404116.1|126518_127808_-	DNA (cytosine-5-)-methyltransferase	NA	Q332I2	Clostridium_botulinum_C_phage	26.8	5.1e-23
WP_002354533.1|128018_129497_+	type II restriction endonuclease Sau3AI	NA	NA	NA	NA	NA
WP_002354535.1|129510_129942_-	very short patch repair endonuclease	NA	V5UTF4	Oenococcus_phage	55.9	8.2e-34
WP_073120029.1|130728_130995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002300116.1|131513_132179_-	helix-turn-helix domain-containing protein	NA	A0A2I7SCV6	Paenibacillus_phage	47.1	2.9e-06
WP_002337346.1|132304_134341_+	DUF1430 domain-containing protein	NA	NA	NA	NA	NA
WP_139438437.1|134344_134983_+|bacteriocin	putative bacteriocin export ABC transporter	bacteriocin	A0A2R8FG22	Brazilian_cedratvirus	28.8	5.9e-12
138495:138520	attR	GGACTGTGACAAGACTTTTGTCACAG	NA	NA	NA	NA
>prophage 10
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	150711	156181	2648833	tRNA	Pandoravirus(25.0%)	7	NA	NA
WP_139438445.1|150711_152154_+	family 1 glycosylhydrolase	NA	A0A0B5JD41	Pandoravirus	27.5	1.8e-32
WP_002293839.1|152261_152963_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002317957.1|153782_153941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296192.1|153998_154208_-|tRNA	phenylalanyl-tRNA synthetase subunit beta	tRNA	NA	NA	NA	NA
WP_002293608.1|154448_155024_+	TIGR00730 family Rossman fold protein	NA	A0A1D3SNB7	Enterococcus_phage	44.9	1.5e-35
WP_002293607.1|155023_155464_+	nucleoside deoxyribosyltransferase	NA	A0A2P0ZL88	Lactobacillus_phage	50.7	8.9e-36
WP_002293834.1|155479_156181_+	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	48.6	7.8e-50
>prophage 11
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	161125	170518	2648833		Streptococcus_phage(25.0%)	5	NA	NA
WP_139438450.1|161125_163219_+	sulfatase-like hydrolase/transferase	NA	W6LM83	Streptococcus_phage	47.3	3.1e-163
WP_002293327.1|164265_164703_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	46.2	4.1e-25
WP_139438453.1|165361_168040_+	magnesium-translocating P-type ATPase	NA	M1HXH2	Paramecium_bursaria_Chlorella_virus	25.6	1.9e-48
WP_139438456.1|168126_168798_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_002293318.1|169444_170518_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	35.0	5.8e-28
>prophage 12
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	179894	182776	2648833		Streptococcus_phage(100.0%)	2	NA	NA
WP_002291594.1|179894_181016_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	31.3	5.8e-23
WP_086274669.1|181273_182776_+	Lsa family ABC-F type ribosomal protection protein	NA	A0A1B0RXA0	Streptococcus_phage	26.3	4.7e-28
>prophage 13
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	190634	191540	2648833		Staphylococcus_phage(100.0%)	1	NA	NA
WP_139438468.1|190634_191540_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	39.4	6.8e-38
>prophage 14
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	196502	197252	2648833		Lactobacillus_phage(100.0%)	1	NA	NA
WP_002287078.1|196502_197252_-	nicotinamide mononucleotide transporter	NA	A0A2H4PB74	Lactobacillus_phage	70.7	5.1e-92
>prophage 15
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	201023	206465	2648833	tRNA	Pandoravirus(33.33%)	6	NA	NA
WP_002287070.1|201023_201704_+	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	43.3	7.3e-45
WP_002287068.1|201856_202837_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_002287066.1|202959_203433_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_002287063.1|203425_203950_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002291442.1|204439_204973_-	exonuclease	NA	A0A1S5SFA9	Streptococcus_phage	43.4	5.9e-26
WP_002297274.1|205712_206465_-	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	47.1	2.9e-58
>prophage 16
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	214389	223666	2648833		Mycoplasma_phage(50.0%)	10	NA	NA
WP_002287050.1|214389_215904_+	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	30.3	8.3e-49
WP_002287048.1|216306_217290_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_002296930.1|217294_217942_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002287046.1|218026_218659_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_002287045.1|218674_219226_-	phosphopantothenoylcysteine decarboxylase	NA	A0A1V0S7W6	Shearwaterpox_virus	41.2	3.2e-30
WP_002287044.1|219222_219960_-	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
WP_002287041.1|219956_220946_-	oxidoreductase	NA	NA	NA	NA	NA
WP_002287040.1|221203_221746_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002287039.1|221762_222848_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	45.0	4.0e-37
WP_002287038.1|222859_223666_+	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	27.6	7.9e-14
>prophage 17
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	237928	249126	2648833	transposase,integrase	Streptococcus_phage(57.14%)	10	237025:237041	252068:252084
237025:237041	attL	GATATTGCTGTTCTAGT	NA	NA	NA	NA
WP_002300746.1|237928_239161_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	28.2	4.7e-42
WP_002296936.1|239302_239506_+	DUF3173 family protein	NA	NA	NA	NA	NA
WP_002287015.1|239565_240768_+|integrase	site-specific integrase	integrase	A0A0S2MV79	Bacillus_phage	28.5	1.1e-32
WP_002287014.1|241416_242547_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	A0A218MNE0	uncultured_virus	45.3	6.0e-84
WP_000222572.1|242660_243614_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002287002.1|243922_244315_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287001.1|244342_245683_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	25.6	9.1e-07
WP_133147395.1|246512_247706_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	64.8	6.4e-145
WP_002341493.1|247784_247991_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	87.3	1.1e-25
WP_117582651.1|247983_249126_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	35.9	6.3e-65
252068:252084	attR	ACTAGAACAGCAATATC	NA	NA	NA	NA
>prophage 18
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	254306	255917	2648833		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_002286999.1|254306_255917_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	48.4	2.3e-145
>prophage 19
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	271264	288782	2648833		Streptococcus_phage(40.0%)	18	NA	NA
WP_002294042.1|271264_273010_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	36.3	1.9e-49
WP_002292337.1|273029_273344_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_002296223.1|273368_273965_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_002294039.1|274028_274673_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.6	4.2e-58
WP_002292340.1|274687_275017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288071.1|275030_275969_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	34.4	3.3e-35
WP_002288073.1|276004_276829_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002288076.1|276821_277169_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	41.1	5.1e-18
WP_002288078.1|277237_278110_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	60.4	3.1e-88
WP_002294035.1|278218_279340_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002288081.1|279393_279996_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	58.6	1.7e-53
WP_002288083.1|280310_282500_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.6	1.8e-286
WP_002304285.1|282825_283593_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.2	8.0e-32
WP_002288087.1|283582_285625_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_071974494.1|285650_285836_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288113.1|285905_286055_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_002288089.1|286065_287580_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	28.5	3.4e-42
WP_104880891.1|287576_288782_+	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	30.7	5.0e-20
>prophage 20
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	292426	293167	2648833		Pandoravirus(100.0%)	1	NA	NA
WP_002288100.1|292426_293167_+	MBL fold metallo-hydrolase	NA	S4VYV9	Pandoravirus	26.3	3.9e-07
>prophage 21
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	312308	314501	2648833		Enterococcus_phage(50.0%)	2	NA	NA
WP_002286660.1|312308_313163_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	38.7	6.8e-40
WP_002286658.1|313163_314501_+	exodeoxyribonuclease VII large subunit	NA	L7RDW5	Acanthamoeba_polyphaga_moumouvirus	29.5	6.7e-26
>prophage 22
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	335510	339884	2648833	tRNA	Bodo_saltans_virus(50.0%)	2	NA	NA
WP_002286621.1|335510_338309_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2H4UVG0	Bodo_saltans_virus	26.4	1.6e-74
WP_002286618.1|338357_339884_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	35.3	8.9e-75
>prophage 23
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	342990	344268	2648833		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_002286608.1|342990_344268_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	28.8	5.8e-35
>prophage 24
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	352136	352337	2648833	integrase	Lactococcus_phage(100.0%)	1	351702:351715	354949:354962
351702:351715	attL	GAAAATGTTAAAGT	NA	NA	NA	NA
WP_139438488.1|352136_352337_-|integrase	tyrosine-type recombinase/integrase	integrase	Q9AZR0	Lactococcus_phage	73.0	2.3e-07
WP_139438488.1|352136_352337_-|integrase	tyrosine-type recombinase/integrase	integrase	Q9AZR0	Lactococcus_phage	73.0	2.3e-07
354949:354962	attR	ACTTTAACATTTTC	NA	NA	NA	NA
>prophage 25
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	360839	364291	2648833		Escherichia_phage(75.0%)	4	NA	NA
WP_002286449.1|360839_361706_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	62.5	3.7e-102
WP_002286442.1|361719_362292_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	49.2	8.3e-42
WP_002294532.1|362313_363342_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	42.9	6.4e-69
WP_104880802.1|363439_364291_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	39.0	1.7e-38
>prophage 26
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	368709	369930	2648833		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002289079.1|368709_369930_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.9	1.1e-11
>prophage 27
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	379245	387397	2648833		uncultured_marine_virus(25.0%)	6	NA	NA
WP_002295420.1|379245_380217_+	glycosyltransferase	NA	A0A0F7L2F7	uncultured_marine_virus	35.5	6.6e-07
WP_002295416.1|381751_382576_+	LicD family protein	NA	NA	NA	NA	NA
WP_002295415.1|382641_383613_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	29.1	2.1e-05
WP_002295413.1|383623_385048_+	membrane protein	NA	NA	NA	NA	NA
WP_002295412.1|385249_386197_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SKV4	Klosneuvirus	38.1	1.5e-51
WP_002295411.1|386236_387397_-	serine hydrolase	NA	A0A2R4AS58	Mycobacterium_phage	25.2	1.9e-08
>prophage 28
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	395221	402695	2648833		Indivirus(20.0%)	8	NA	NA
WP_002317368.1|395221_396136_+	cation transporter	NA	A0A1V0SED0	Indivirus	31.5	2.1e-10
WP_002292862.1|396183_396654_+	GtrA family protein	NA	NA	NA	NA	NA
WP_002295401.1|396738_397347_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	60.1	7.7e-70
WP_002292860.1|397480_397681_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	67.7	7.6e-19
WP_002295400.1|398434_399661_+	LytR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002292857.1|399768_400239_-	tryptophan-rich sensory protein	NA	NA	NA	NA	NA
WP_104880838.1|400560_401139_+	chitin-binding protein	NA	A0A0K1Y848	Apis_mellifera_filamentous_virus	34.4	9.7e-14
WP_002295399.1|401312_402695_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	37.4	3.5e-86
>prophage 29
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	409073	416455	2648833	protease	Streptococcus_phage(33.33%)	6	NA	NA
WP_002295394.1|409073_410654_+	peptide chain release factor 3	NA	A0A1B0RXH7	Streptococcus_phage	28.4	5.1e-33
WP_002287661.1|410851_411076_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002290825.1|411280_411601_-	DUF1827 family protein	NA	NA	NA	NA	NA
WP_002287598.1|411748_413983_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	39.1	5.1e-127
WP_002287602.1|414461_414728_+	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_002295388.1|414727_416455_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	35.9	9.3e-20
>prophage 30
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	424249	424987	2648833		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_002287617.1|424249_424987_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.7	4.1e-17
>prophage 31
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	432351	432999	2648833		Bacillus_virus(100.0%)	1	NA	NA
WP_002322947.1|432351_432999_+	nicotinate-nucleotide adenylyltransferase	NA	G3MA22	Bacillus_virus	33.2	4.8e-22
>prophage 32
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	440393	444720	2648833	tRNA	Streptococcus_phage(50.0%)	4	NA	NA
WP_002287647.1|440393_442217_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	29.1	6.5e-64
WP_002287649.1|442263_442443_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_002352380.1|442480_442678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287651.1|442779_444720_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	35.2	3.3e-114
>prophage 33
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	449526	456121	2648833		Moraxella_phage(50.0%)	4	NA	NA
WP_002295362.1|449526_450963_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	29.0	3.8e-43
WP_002290958.1|451132_452329_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_002295359.1|452390_452576_-	YjzD family protein	NA	NA	NA	NA	NA
WP_002330253.1|452806_456121_+	DNA polymerase III subunit alpha	NA	A0A291AWR1	Streptomyces_phage	32.6	2.8e-150
>prophage 34
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	461207	465010	2648833		Synechococcus_phage(33.33%)	3	NA	NA
WP_002295350.1|461207_462629_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A1D8KPW3	Synechococcus_phage	31.1	4.2e-34
WP_002290973.1|462821_463508_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.2	4.8e-28
WP_002298265.1|463504_465010_+	HAMP domain-containing histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	25.1	3.9e-06
>prophage 35
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	482056	484670	2648833	integrase	Streptococcus_phage(100.0%)	3	472365:472378	485110:485123
472365:472378	attL	AAAAAAGATATTGA	NA	NA	NA	NA
WP_021391141.1|482056_483250_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	64.1	8.4e-145
WP_032518109.1|483328_483535_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	88.9	3.9e-26
WP_021391143.1|483527_484670_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	36.2	4.8e-65
485110:485123	attR	TCAATATCTTTTTT	NA	NA	NA	NA
>prophage 36
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	502511	503762	2648833	transposase	Streptococcus_phage(100.0%)	1	NA	NA
WP_002287107.1|502511_503762_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
>prophage 37
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	518811	521478	2648833		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_002294372.1|518811_521478_+	cation-translocating P-type ATPase	NA	M1HJQ2	Paramecium_bursaria_Chlorella_virus	30.1	1.6e-82
>prophage 38
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	527878	532052	2648833		Staphylococcus_phage(50.0%)	4	NA	NA
WP_002289273.1|527878_528730_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.4	1.4e-53
WP_002294378.1|528895_529900_+	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_002289464.1|530140_530497_-	YxeA family protein	NA	NA	NA	NA	NA
WP_002289463.1|530864_532052_+	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	28.5	1.3e-33
>prophage 39
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	535784	542992	2648833		Bacillus_phage(25.0%)	5	NA	NA
WP_002289460.1|535784_536417_+	transglycosylase SLT domain-containing protein	NA	A0A0N9SIT8	Bacillus_phage	38.1	5.6e-15
WP_002289459.1|536475_537336_+	DUF368 domain-containing protein	NA	NA	NA	NA	NA
WP_042959752.1|537442_539836_+	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	26.2	9.5e-39
WP_002289497.1|540017_541859_+	DNA primase	NA	A0A1S5RH70	Helicobacter_phage	32.1	1.2e-49
WP_002289498.1|541882_542992_+	RNA polymerase sigma factor RpoD	NA	F4YCU2	Synechococcus_phage	38.9	9.8e-39
>prophage 40
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	547043	549641	2648833		uncultured_Mediterranean_phage(66.67%)	4	NA	NA
WP_002294386.1|547043_547931_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.7	1.2e-31
WP_002294387.1|547949_548321_+	protein RibT	NA	NA	NA	NA	NA
WP_002296973.1|548290_549088_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.0	1.1e-07
WP_002296975.1|549071_549641_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	32.7	1.5e-14
>prophage 41
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	557106	558510	2648833		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_002311164.1|557106_558510_+	ATP-dependent DNA helicase RecQ	NA	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	35.5	6.5e-64
>prophage 42
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	563038	563314	2648833		Geobacillus_virus(100.0%)	1	NA	NA
WP_002290178.1|563038_563314_+	HU family DNA-binding protein	NA	A0A0H3UZA0	Geobacillus_virus	69.7	1.8e-26
>prophage 43
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	566524	569200	2648833	tRNA	Streptococcus_phage(50.0%)	3	NA	NA
WP_002294412.1|566524_567400_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	45.3	5.9e-63
WP_002290045.1|567547_567880_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_002294414.1|567991_569200_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	51.7	1.5e-45
>prophage 44
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	572696	577779	2648833		Staphylococcus_phage(50.0%)	5	NA	NA
WP_002288390.1|572696_574583_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.6e-52
WP_002294416.1|574594_575542_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	64.6	7.1e-123
WP_002288392.1|575561_576089_+	dihydrofolate reductase	NA	A0A1D6X864	Bacillus_phage	37.1	6.7e-22
WP_002288393.1|576151_576805_-	hemolysin III family protein	NA	NA	NA	NA	NA
WP_002288394.1|576936_577779_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	40.2	6.5e-19
>prophage 45
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	583386	591714	2648833	protease,tRNA	Emiliania_huxleyi_virus(25.0%)	7	NA	NA
WP_002296990.1|583386_584154_+	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	39.5	2.7e-27
WP_002303743.1|584209_585067_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_002288411.1|585188_587267_+	type I DNA topoisomerase	NA	A0A167R9A0	Powai_lake_megavirus	38.5	1.2e-101
WP_002320953.1|587235_588612_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_002288415.1|588809_589715_+	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	29.4	9.4e-32
WP_002288419.1|589751_590300_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
WP_002288421.1|590313_591714_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A173GFL6	Erwinia_phage	28.8	1.7e-43
>prophage 46
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	594976	601992	2648833		Bacillus_virus(66.67%)	3	NA	NA
WP_002303746.1|594976_597022_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.3	2.4e-115
WP_002296998.1|597033_599484_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	7.1e-98
WP_002289265.1|599760_601992_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	42.5	2.4e-169
>prophage 47
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	613366	614332	2648833		Planktothrix_phage(100.0%)	1	NA	NA
WP_002289763.1|613366_614332_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.9	2.0e-27
>prophage 48
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	619176	619800	2648833		Enterococcus_phage(100.0%)	1	NA	NA
WP_002326685.1|619176_619800_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	56.4	3.9e-37
>prophage 49
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	630278	631298	2648833		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_002289800.1|630278_631298_+	lactate dehydrogenase	NA	A0A2R8FDS8	Brazilian_cedratvirus	34.3	1.1e-23
>prophage 50
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	640518	641136	2648833		Clostridium_botulinum_C_phage(100.0%)	1	NA	NA
WP_002295461.1|640518_641136_+	glycoside hydrolase family 73 protein	NA	Q332B8	Clostridium_botulinum_C_phage	41.1	3.4e-25
>prophage 51
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	650352	662563	2648833		Prochlorococcus_phage(25.0%)	12	NA	NA
WP_002303771.1|650352_650841_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.7	1.9e-23
WP_002302886.1|650824_651958_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_002288023.1|651970_653266_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.1	4.5e-19
WP_002297115.1|653445_653823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288021.1|654078_654807_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	41.4	4.6e-45
WP_002295474.1|654806_655061_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002288017.1|655062_655734_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_002288015.1|655734_657957_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.3	1.9e-150
WP_002288013.1|657941_659381_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.1	5.3e-53
WP_002321731.1|659412_660456_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.7	2.7e-62
WP_002288010.1|660452_661031_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.4	1.3e-26
WP_002288009.1|661027_662563_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.9	1.2e-74
>prophage 52
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	666579	676078	2648833		Enterobacteria_phage(25.0%)	7	NA	NA
WP_002295478.1|666579_668031_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	29.1	4.1e-21
WP_002287999.1|668044_669061_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002287997.1|669280_670369_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002287995.1|670422_671949_+	sugar ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.1	8.2e-12
WP_002287993.1|671950_673156_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002287992.1|673412_674390_+	GMP reductase	NA	G3MBI2	Bacillus_virus	80.4	2.7e-149
WP_002297114.1|674653_676078_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.1	1.1e-18
>prophage 53
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	680303	681710	2648833		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_139438506.1|680303_681710_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.5	2.8e-46
>prophage 54
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	685178	686951	2648833		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_002288736.1|685178_686951_+	DNA helicase RecQ	NA	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	37.3	3.6e-83
>prophage 55
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	697679	700485	2648833		Bacillus_phage(50.0%)	2	NA	NA
WP_002295503.1|697679_698219_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.3	5.4e-35
WP_002322120.1|698211_700485_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	31.3	1.3e-32
>prophage 56
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	703643	708147	2648833		Streptococcus_phage(100.0%)	4	NA	NA
WP_002289122.1|703643_705572_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	38.5	4.2e-106
WP_002289121.1|705768_706602_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_002289120.1|706793_707498_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_002289118.1|707520_708147_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	50.5	5.3e-50
>prophage 57
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	711549	715280	2648833		Streptococcus_phage(50.0%)	4	NA	NA
WP_002289114.1|711549_712470_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	30.0	1.3e-23
WP_002289113.1|712623_712968_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_002297227.1|713157_713658_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002289111.1|714641_715280_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	53.6	4.9e-35
>prophage 58
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	722172	723639	2648833		Acinetobacter_phage(100.0%)	1	NA	NA
WP_002288052.1|722172_723639_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	38.6	3.4e-87
>prophage 59
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	727341	732826	2648833	tRNA	Bacillus_phage(50.0%)	3	NA	NA
WP_002288050.1|727341_731064_+	helicase-exonuclease AddAB subunit AddA	NA	S5MMD7	Bacillus_phage	23.5	1.6e-24
WP_002295781.1|731132_731474_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002288048.1|731782_732826_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	33.6	4.1e-31
>prophage 60
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	736684	737422	2648833		Planktothrix_phage(100.0%)	1	NA	NA
WP_002288042.1|736684_737422_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	1.3e-31
>prophage 61
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	740568	741924	2648833		Ugandan_cassava_brown_streak_virus(100.0%)	1	NA	NA
WP_139438509.1|740568_741924_+	ribonuclease PH	NA	A0A0P0A2M4	Ugandan_cassava_brown_streak_virus	30.8	7.1e-15
>prophage 62
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	747067	750210	2648833		Catovirus(50.0%)	3	NA	NA
WP_002295798.1|747067_747829_-	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	38.0	4.0e-23
WP_002295800.1|748017_749112_+	DUF871 domain-containing protein	NA	NA	NA	NA	NA
WP_002289735.1|749274_750210_+	alpha/beta hydrolase	NA	W5S4D8	Pithovirus	25.4	2.0e-05
>prophage 63
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	756201	765030	2648833		Bacillus_phage(20.0%)	8	NA	NA
WP_002338264.1|756201_758499_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	33.8	7.4e-81
WP_002295813.1|758512_759025_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.6	2.4e-32
WP_002297436.1|759313_759532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002322319.1|759710_760343_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	59.4	2.3e-16
WP_002295816.1|760480_760732_+	DUF896 family protein	NA	NA	NA	NA	NA
WP_002295818.1|760833_762831_+	transketolase	NA	NA	NA	NA	NA
WP_002289538.1|763076_763964_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0K2CP65	Brevibacillus_phage	43.2	4.5e-18
WP_002332405.1|764103_765030_+	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	56.9	2.3e-97
>prophage 64
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	769934	770633	2648833		Bacillus_phage(100.0%)	1	NA	NA
WP_002289610.1|769934_770633_+	DnaD domain protein	NA	A0A0N7AE27	Bacillus_phage	42.5	4.9e-12
>prophage 65
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	774643	775291	2648833		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_002289604.1|774643_775291_-	Holliday junction resolvase RecU	NA	A0A2H4J3A4	uncultured_Caudovirales_phage	37.5	1.7e-22
>prophage 66
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	779789	782308	2648833		Golden_Marseillevirus(50.0%)	4	NA	NA
WP_002289185.1|779789_780473_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	2.5e-13
WP_002324816.1|780472_780694_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071974473.1|780670_780850_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289186.1|781117_782308_+	glycine C-acetyltransferase	NA	D2TEZ5	Emiliania_huxleyi_virus	33.3	3.7e-52
>prophage 67
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	786648	791504	2648833	tRNA	Klosneuvirus(50.0%)	4	NA	NA
WP_002289190.1|786648_787998_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	31.7	3.6e-51
WP_002295842.1|788042_788474_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_008268811.1|788561_788756_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002299704.1|788861_791504_+|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	34.4	7.4e-69
>prophage 68
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	794629	794863	2648833		Lactococcus_phage(100.0%)	1	NA	NA
WP_002303804.1|794629_794863_-	cold shock domain-containing protein	NA	Q9AZD3	Lactococcus_phage	49.2	5.6e-13
>prophage 69
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	798399	804701	2648833		Bodo_saltans_virus(25.0%)	6	NA	NA
WP_104880794.1|798399_799311_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	29.1	2.4e-11
WP_002295862.1|799545_800085_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_010728368.1|800098_801382_+	uracil-xanthine permease	NA	Q9KX94	Enterobacteria_phage	37.1	7.0e-65
WP_002288872.1|801394_802321_+	aspartate carbamoyltransferase catalytic subunit	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	33.0	3.6e-26
WP_139438512.1|802339_803620_+	dihydroorotase	NA	NA	NA	NA	NA
WP_002288877.1|803624_804701_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.4	5.2e-61
>prophage 70
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	818670	819441	2648833		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_002289629.1|818670_819441_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.3	9.6e-09
>prophage 71
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	822615	824844	2648833		Streptococcus_phage(100.0%)	1	NA	NA
WP_002322737.1|822615_824844_+	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	52.6	1.6e-128
>prophage 72
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	831802	833023	2648833	integrase	unidentified_phage(100.0%)	1	829088:829101	836615:836628
829088:829101	attL	CTGTGATTCCGCTA	NA	NA	NA	NA
WP_139438522.1|831802_833023_-|integrase	tyrosine-type recombinase/integrase	integrase	H7BUX8	unidentified_phage	40.1	6.7e-73
WP_139438522.1|831802_833023_-|integrase	tyrosine-type recombinase/integrase	integrase	H7BUX8	unidentified_phage	40.1	6.7e-73
836615:836628	attR	CTGTGATTCCGCTA	NA	NA	NA	NA
>prophage 73
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	837680	839301	2648833		Staphylococcus_phage(50.0%)	2	NA	NA
WP_060775910.1|837680_838436_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	41.2	9.9e-43
WP_139438532.1|838596_839301_+	response regulator	NA	W8CYM9	Bacillus_phage	37.4	3.9e-33
>prophage 74
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	847373	850035	2648833		Planktothrix_phage(50.0%)	3	NA	NA
WP_002286060.1|847373_848060_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	1.9e-29
WP_002325708.1|848065_849139_-	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_002286063.1|849360_850035_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.3	1.1e-29
>prophage 75
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	862719	863568	2648833		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002286075.1|862719_863568_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	37.4	9.8e-15
>prophage 76
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	874400	877412	2648833		Pandoravirus(50.0%)	4	NA	NA
WP_002295911.1|874400_874949_+	AAA family ATPase	NA	S4W1R9	Pandoravirus	29.4	3.3e-11
WP_002295912.1|875204_875717_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002295913.1|875760_876717_-	sce7725 family protein	NA	NA	NA	NA	NA
WP_002298443.1|876722_877412_-	hypothetical protein	NA	U5PU21	Bacillus_phage	33.2	1.1e-19
>prophage 77
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	880639	883711	2648833		Hokovirus(50.0%)	3	NA	NA
WP_002295918.1|880639_881584_-	dihydroorotate oxidase	NA	A0A1V0SH91	Hokovirus	44.4	5.2e-65
WP_002295919.1|881667_882315_-	lipoprotein	NA	NA	NA	NA	NA
WP_002295921.1|882544_883711_-	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	39.3	1.6e-47
>prophage 78
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	901551	903081	2648833		Enterococcus_phage(100.0%)	1	NA	NA
WP_002288179.1|901551_903081_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.0	3.9e-38
>prophage 79
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	927182	931261	2648833		Trichoplusia_ni_ascovirus(50.0%)	5	NA	NA
WP_002296675.1|927182_928076_-	SDR family oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	46.0	8.9e-59
WP_060776005.1|928153_929092_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_002296672.1|929125_929476_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_002296671.1|929508_930411_-	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_002296670.1|930403_931261_-	glycosyltransferase family 8 protein	NA	A0ZYL4	Archaeal_BJ1_virus	27.1	1.3e-19
>prophage 80
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	936274	937940	2648833		Lactococcus_phage(50.0%)	2	NA	NA
WP_002293303.1|936274_936475_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	77.3	3.9e-23
WP_002296656.1|937226_937940_-	HAD family phosphatase	NA	A0A1D8KPI1	Synechococcus_phage	23.0	5.4e-06
>prophage 81
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	943779	948753	2648833		Paramecium_bursaria_Chlorella_virus(33.33%)	5	NA	NA
WP_002296641.1|943779_944781_-	2-hydroxyacid dehydrogenase	NA	M1H9J0	Paramecium_bursaria_Chlorella_virus	29.0	2.8e-24
WP_002296640.1|944782_945685_-	decarboxylating 6-phosphogluconate dehydrogenase	NA	A0A1D8KGX1	Synechococcus_phage	35.3	3.3e-53
WP_002296639.1|945849_946698_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002296638.1|947343_947550_+	DUF3955 domain-containing protein	NA	NA	NA	NA	NA
WP_002296637.1|947751_948753_-	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	31.8	2.5e-09
>prophage 82
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	957458	960195	2648833	transposase	Synechococcus_phage(50.0%)	3	NA	NA
WP_002311093.1|957458_958154_-	fructose-6-phosphate aldolase	NA	E3SKN5	Synechococcus_phage	31.5	1.0e-22
WP_002296624.1|958137_958536_-	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA	NA
WP_002287107.1|958944_960195_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
>prophage 83
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	964262	1086025	2648833	holin,terminase,integrase,capsid,transposase,tRNA,tail	Streptococcus_phage(30.0%)	124	1049799:1049817	1076610:1076628
WP_002289420.1|964262_965063_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.2	2.6e-09
WP_002289418.1|965286_965502_+	DUF378 domain-containing protein	NA	NA	NA	NA	NA
WP_002303864.1|965640_966126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289415.1|966581_966995_+	Hsp20/alpha crystallin family protein	NA	A0A1B2LRT2	Wolbachia_phage	31.5	2.1e-07
WP_002322258.1|967131_967392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303865.1|967319_967559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002321532.1|967509_967800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000997695.1|968045_969224_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_123038677.1|969941_970691_-	lanthionine synthetase C family protein	NA	NA	NA	NA	NA
WP_086328191.1|971617_972334_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_086328190.1|972330_973725_+	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_104661544.1|973657_973801_+	cyclic lactone autoinducer peptide	NA	NA	NA	NA	NA
WP_086328188.1|973810_974395_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104880910.1|974650_975943_-	MFS transporter	NA	NA	NA	NA	NA
WP_086328187.1|976226_977093_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	36.2	2.1e-44
WP_104880911.1|977188_977596_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_104880912.1|977985_978411_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_104880913.1|978972_980016_+	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_104880819.1|980162_980576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104880833.1|980611_981265_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_104880820.1|981538_982978_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	25.2	1.6e-28
WP_104880821.1|982988_984905_-	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_139438554.1|985043_985880_-	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_104880823.1|986331_986916_-	DUF1211 domain-containing protein	NA	NA	NA	NA	NA
WP_104880824.1|987214_988198_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104880825.1|988206_988884_-	flavodoxin	NA	NA	NA	NA	NA
WP_104880826.1|988937_989258_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_104880827.1|989278_989857_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_104880828.1|989868_990582_-	flavodoxin	NA	NA	NA	NA	NA
WP_104880829.1|990592_991348_-	flavodoxin	NA	NA	NA	NA	NA
WP_104880830.1|991481_992462_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010726445.1|992636_993701_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010726444.1|993717_994755_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010726443.1|995306_996218_-	conjugal transfer protein	NA	NA	NA	NA	NA
WP_010726442.1|996236_996395_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010726441.1|996394_998224_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	29.6	1.1e-39
WP_010726440.1|998937_999888_-	lipoprotein	NA	A0A1S5SEZ8	Streptococcus_phage	64.3	2.2e-108
WP_010726439.1|999884_1002008_-|transposase	transposase	transposase	A0A1S5SF30	Streptococcus_phage	59.9	6.2e-183
WP_104880831.1|1002012_1004460_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.4	0.0e+00
WP_010726436.1|1004446_1004836_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	68.3	5.1e-43
WP_025480984.1|1004874_1005735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010726434.1|1005747_1006209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010726432.1|1007912_1008950_-	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_010726431.1|1009072_1009576_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	66.5	4.3e-58
WP_002298822.1|1009587_1009809_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	87.7	4.5e-28
WP_080111713.1|1009813_1009951_-	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_010726430.1|1009947_1011132_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	61.5	3.9e-142
WP_104880834.1|1011389_1012769_-	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	63.0	2.9e-157
WP_025480982.1|1012838_1013192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002335604.1|1013192_1013567_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	67.9	8.4e-35
WP_010726427.1|1013579_1013894_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	53.4	8.6e-25
WP_010726426.1|1014005_1017230_-	fibrinogen-binding MSCRAMM adhesin Fss3	NA	NA	NA	NA	NA
WP_010726425.1|1017322_1018234_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002335097.1|1018682_1018874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024635286.1|1018917_1019220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000997695.1|1019817_1020996_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_000997695.1|1021624_1022803_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_000997695.1|1023431_1024610_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_004847071.1|1026066_1026447_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_004847070.1|1026460_1027306_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_004847068.1|1027317_1028145_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA	NA
WP_009320104.1|1028119_1029013_-	Rossmann-like and DUF2520 domain-containing protein	NA	NA	NA	NA	NA
WP_004847061.1|1029453_1030125_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009320105.1|1030672_1031683_+	replication initiation factor domain-containing protein	NA	NA	NA	NA	NA
WP_002607397.1|1031682_1031886_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	83.6	2.3e-26
WP_009320106.1|1031964_1033158_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	64.3	3.2e-144
WP_002295273.1|1034029_1034287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002293041.1|1035151_1035349_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	78.5	3.9e-23
WP_002325017.1|1036426_1037446_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1G5SA77	Enterococcus_phage	66.7	2.2e-61
WP_139438556.1|1037456_1037654_-|holin	holin	holin	A0A0S2MYF6	Enterococcus_phage	84.4	3.9e-23
WP_002339954.1|1037676_1037970_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002298029.1|1038007_1038145_-	XkdX family protein	NA	NA	NA	NA	NA
WP_010706359.1|1038146_1038593_-	hypothetical protein	NA	NA	NA	NA	NA
WP_098188703.1|1039282_1040444_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_010706361.1|1042236_1043286_-	hypothetical protein	NA	Q9T1A4	Listeria_phage	32.4	8.7e-21
WP_010706362.1|1043285_1044329_-	hypothetical protein	NA	Q9T1A5	Listeria_phage	54.7	7.4e-105
WP_010706363.1|1044337_1045171_-|tail	phage tail family protein	tail	Q9T1A6	Listeria_phage	45.7	9.9e-60
WP_010706364.1|1045175_1048658_-	tape measure protein	NA	Q938K3	Temperate_phage	53.9	1.6e-10
WP_010706365.1|1048650_1049232_-	hypothetical protein	NA	Q5YA62	Bacillus_phage	49.5	7.1e-41
WP_010706366.1|1049240_1049690_-	hypothetical protein	NA	B3GW11	Streptococcus_phage	31.5	4.6e-11
WP_002330830.1|1049730_1050078_-	fibronectin type III domain-containing protein	NA	D2J067	Enterococcus_phage	47.7	3.4e-22
1049799:1049817	attL	GCGCTTTTTCGATTTCATC	NA	NA	NA	NA
WP_010706367.1|1050067_1050526_-	hypothetical protein	NA	Q5YA64	Bacillus_phage	48.3	8.4e-29
WP_002330828.1|1050522_1050924_-|capsid	phage capsid protein	capsid	Q5YA65	Bacillus_phage	55.7	7.1e-40
WP_002330827.1|1050923_1051250_-|capsid	phage capsid protein	capsid	Q5YA66	Bacillus_phage	54.4	1.1e-27
WP_002330826.1|1051249_1051591_-	hypothetical protein	NA	Q5YA67	Bacillus_phage	61.1	6.2e-37
WP_002330825.1|1051584_1051989_-	hypothetical protein	NA	Q5YA68	Bacillus_phage	61.9	3.2e-40
WP_025480326.1|1052021_1052270_-	Ig domain-containing protein	NA	A5GYM0	Lactococcus_phage	69.2	1.0e-17
WP_010706369.1|1052287_1053238_-|capsid	phage major capsid protein	capsid	Q9T1B7	Listeria_phage	76.2	1.9e-123
WP_002330823.1|1053256_1053832_-|capsid	phage capsid protein	capsid	M1HNV6	Streptococcus_phage	33.1	8.7e-15
WP_123038697.1|1053942_1055106_-|capsid	capsid protein	capsid	Q5YA73	Bacillus_phage	59.2	2.7e-132
WP_010706371.1|1056619_1057909_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0B5CYJ6	Listeria_phage	58.2	1.0e-148
WP_025480327.1|1057892_1058597_-	helix-turn-helix domain-containing protein	NA	A0A2P1JTW4	Anoxybacillus_phage	46.4	1.1e-40
WP_010706373.1|1058648_1059224_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010706374.1|1059503_1059917_-	ArpU family phage transcriptional regulator	NA	C9E2P5	Enterococcus_phage	79.6	6.2e-55
WP_010706376.1|1060158_1060458_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010706377.1|1060454_1061204_-	DUF1642 domain-containing protein	NA	D2IZY1	Enterococcus_phage	72.0	2.7e-32
WP_033627199.1|1061203_1061509_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002344305.1|1061681_1062041_-	DUF1064 domain-containing protein	NA	A0A1P8BKR1	Lactococcus_phage	47.5	3.1e-18
WP_139438558.1|1062033_1062912_-	DnaD domain protein	NA	NA	NA	NA	NA
WP_010724164.1|1062996_1063851_-	DNA recombination protein RecT	NA	D2IYT9	Enterococcus_phage	85.8	1.2e-132
WP_010706380.1|1063944_1064886_-	hypothetical protein	NA	D2IZK1	Enterococcus_phage	76.7	1.5e-141
WP_002309084.1|1065022_1065208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002319162.1|1065204_1065483_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438559.1|1065488_1066034_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438561.1|1066245_1066500_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002324930.1|1066638_1067031_+	helix-turn-helix transcriptional regulator	NA	O03970	Lactobacillus_phage	38.6	7.0e-16
WP_010706382.1|1067037_1067466_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002324932.1|1067530_1068097_+	DUF5067 domain-containing protein	NA	NA	NA	NA	NA
WP_010706383.1|1068219_1069050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010706385.1|1069293_1070247_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_002288357.1|1070303_1071431_+|integrase	site-specific integrase	integrase	A0A2I7SCV1	Paenibacillus_phage	55.5	1.8e-109
WP_002288355.1|1071524_1073360_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.4	3.4e-20
WP_002288353.1|1073506_1074727_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002288352.1|1074746_1075241_+	nucleoside deoxyribosyltransferase	NA	A0A1W6JK28	Lactococcus_phage	56.5	7.2e-42
WP_002288350.1|1075233_1075905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002301554.1|1076055_1078665_-	ATP-dependent chaperone ClpB	NA	A0A2I7SAX5	Vibrio_phage	35.0	1.6e-132
1076610:1076628	attR	GCGCTTTTTCGATTTCATC	NA	NA	NA	NA
WP_002288347.1|1078915_1079962_-	flippase-like domain-containing protein	NA	NA	NA	NA	NA
WP_002288344.1|1079972_1080245_-	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_002288343.1|1080279_1081188_-	YegS/Rv2252/BmrU family lipid kinase	NA	NA	NA	NA	NA
WP_002288340.1|1081319_1082552_-	peptidase T	NA	NA	NA	NA	NA
WP_104880785.1|1082566_1083688_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_002288335.1|1083684_1084386_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_002288333.1|1084529_1084970_-	lipoprotein	NA	NA	NA	NA	NA
WP_002288331.1|1085098_1086025_-	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	41.3	5.1e-33
>prophage 84
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1089200	1092727	2648833		Bacillus_phage(100.0%)	2	NA	NA
WP_002288323.1|1089200_1090037_-	DNA-formamidopyrimidine glycosylase	NA	A0A127AWE5	Bacillus_phage	30.2	1.8e-24
WP_002303538.1|1090081_1092727_-	DNA polymerase I	NA	F8WQ35	Bacillus_phage	35.7	3.0e-54
>prophage 85
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1099752	1103700	2648833	transposase	Bacillus_phage(50.0%)	4	NA	NA
WP_002296404.1|1099752_1100484_-	serine/threonine protein phosphatase	NA	A7KV25	Bacillus_phage	30.8	1.7e-15
WP_002296405.1|1100552_1101494_-	rhodanese-related sulfurtransferase	NA	NA	NA	NA	NA
WP_002296407.1|1101673_1102042_-	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_104880909.1|1102449_1103700_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.0	6.8e-113
>prophage 86
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1116171	1117908	2648833		Enterobacteria_phage(100.0%)	1	NA	NA
WP_002289136.1|1116171_1117908_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	30.6	5.0e-21
>prophage 87
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1121721	1122888	2648833		Pandoravirus(100.0%)	1	NA	NA
WP_002289142.1|1121721_1122888_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	35.3	1.6e-39
>prophage 88
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1126622	1128506	2648833		Herpes_simplex_virus(100.0%)	1	NA	NA
WP_139438565.1|1126622_1128506_-	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	34.3	2.4e-98
>prophage 89
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1131963	1136353	2648833		Moumouvirus(25.0%)	5	NA	NA
WP_002296415.1|1131963_1132977_-	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	23.3	7.9e-11
WP_002288466.1|1133054_1133243_-	hypothetical protein	NA	A0A218MNE0	uncultured_virus	50.9	2.6e-08
WP_002295229.1|1133682_1133811_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_002288467.1|1133813_1135187_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	D0R096	Streptococcus_phage	55.9	7.1e-140
WP_002288471.1|1135297_1136353_-	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.4	3.2e-15
>prophage 90
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1139672	1143960	2648833		Serratia_phage(50.0%)	2	NA	NA
WP_002323115.1|1139672_1141709_-	NAD-dependent DNA ligase LigA	NA	A0A289ZTZ3	Serratia_phage	37.1	4.8e-100
WP_002319708.1|1141725_1143960_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	40.1	9.5e-126
>prophage 91
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1152139	1153390	2648833	protease	Bacillus_virus(100.0%)	1	NA	NA
WP_002288492.1|1152139_1153390_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.8	1.1e-147
>prophage 92
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1156830	1160373	2648833		Salinibacter_virus(50.0%)	3	NA	NA
WP_002296309.1|1156830_1157856_-	signal peptide peptidase SppA	NA	A0A2I6UH21	Salinibacter_virus	33.1	3.2e-20
WP_002287827.1|1157868_1158159_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002287825.1|1158567_1160373_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.8	9.8e-97
>prophage 93
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1175536	1183599	2648833		Streptococcus_phage(50.0%)	6	NA	NA
WP_002289698.1|1175536_1176472_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.1	2.0e-53
WP_002289697.1|1176505_1177504_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	62.9	2.6e-115
WP_002289695.1|1177500_1178385_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.4	5.4e-08
WP_002296517.1|1178519_1179251_-	aspartate racemase	NA	NA	NA	NA	NA
WP_002294441.1|1179254_1180520_-	D-aspartate ligase	NA	NA	NA	NA	NA
WP_002296519.1|1180782_1183599_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.4	3.6e-311
>prophage 94
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1187365	1195341	2648833		Chrysochromulina_ericina_virus(50.0%)	8	NA	NA
WP_002292113.1|1187365_1188103_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	44.7	2.8e-34
WP_002296523.1|1188147_1188321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296524.1|1188332_1188962_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289374.1|1189043_1190210_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.7	1.9e-24
WP_002292134.1|1190360_1192190_-	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	48.8	2.2e-136
WP_002296525.1|1192240_1192804_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_002289532.1|1192897_1193941_-	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_002289534.1|1194174_1195341_-	oxygen-independent coproporphyrinogen III oxidase	NA	A0A0N7G7K6	Chrysochromulina_ericina_virus	32.8	5.5e-08
>prophage 95
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1203709	1317229	2648833	holin,portal,protease,terminase,integrase,capsid,transposase,head,tRNA,plate,tail	Enterococcus_phage(12.73%)	123	1257923:1257944	1296002:1296023
WP_002288520.1|1203709_1204633_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_139438570.1|1205000_1207364_-	phosphoketolase	NA	NA	NA	NA	NA
WP_002288514.1|1207811_1207985_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288513.1|1208141_1208489_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_002288511.1|1208515_1210822_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	23.7	3.6e-19
WP_002288509.1|1210834_1211146_-	YlxQ-related RNA-binding protein	NA	NA	NA	NA	NA
WP_002288501.1|1211142_1211436_-	YlxR family protein	NA	NA	NA	NA	NA
WP_002288500.1|1211457_1212633_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_002288499.1|1212655_1213129_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_002288497.1|1213273_1217632_-	PolC-type DNA polymerase III	NA	A0A0K2SUJ2	Clostridium_phage	40.8	1.9e-21
WP_002288495.1|1217843_1219553_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002288494.1|1219620_1220889_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_002294135.1|1221049_1221850_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_002317620.1|1221846_1222659_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	46.8	2.0e-25
WP_002293875.1|1222853_1223411_-	ribosome recycling factor	NA	NA	NA	NA	NA
WP_002293877.1|1223413_1224136_-	UMP kinase	NA	NA	NA	NA	NA
WP_002293878.1|1224271_1225153_-	elongation factor Ts	NA	NA	NA	NA	NA
WP_002293880.1|1225251_1226034_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_002293881.1|1226392_1226872_+	ArgR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002332421.1|1228173_1228959_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_002317792.1|1229304_1230996_-|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	32.8	1.3e-74
WP_002317793.1|1231416_1232364_-	carbamate kinase	NA	NA	NA	NA	NA
WP_002288437.1|1232478_1233498_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_002288439.1|1233588_1234818_-	arginine deiminase	NA	NA	NA	NA	NA
WP_002288442.1|1235278_1235980_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_002317795.1|1236551_1237568_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.4	4.1e-60
WP_002306425.1|1237564_1238029_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_002293890.1|1238035_1238578_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_079996781.1|1238561_1239386_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_025479154.1|1239474_1240455_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	28.6	9.9e-19
WP_002332423.1|1240478_1241963_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_002288452.1|1241974_1242964_-	UDP-glucose 4-epimerase GalE	NA	A0A1V0SG19	Hokovirus	36.8	2.1e-48
WP_002288457.1|1243212_1243380_+	DUF3042 family protein	NA	NA	NA	NA	NA
WP_002332424.1|1243441_1245253_-	FAD/NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_002330097.1|1245249_1245615_-	DUF488 family protein	NA	NA	NA	NA	NA
WP_002293900.1|1245777_1246173_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_002293901.1|1246190_1247153_-	ROK family glucokinase	NA	NA	NA	NA	NA
WP_002293902.1|1247152_1247365_-	YqgQ family protein	NA	NA	NA	NA	NA
WP_002330096.1|1247385_1248084_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_002289886.1|1248103_1248646_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_002293903.1|1248777_1249782_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_002332425.1|1249778_1250768_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_002293905.1|1250764_1251571_-	ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	32.1	1.0e-13
WP_002293906.1|1251736_1252693_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002324997.1|1252769_1253288_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	39.1	9.2e-24
WP_002296119.1|1253375_1253525_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_139438573.1|1253754_1254201_+	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
WP_002293915.1|1254394_1256290_-	asparagine synthase (glutamine-hydrolyzing)	NA	F2Y2L7	Organic_Lake_phycodnavirus	26.2	6.0e-20
WP_002330095.1|1256614_1257589_-	choloylglycine hydrolase family protein	NA	M1H001	Paramecium_bursaria_Chlorella_virus	29.7	3.9e-23
1257923:1257944	attL	ATATAAGGAAGGTACAGGATTT	NA	NA	NA	NA
WP_139438575.1|1258382_1259402_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1G5SA77	Enterococcus_phage	66.1	2.4e-60
WP_002346371.1|1259412_1259610_-|holin	holin	holin	A0A0S2MYF6	Enterococcus_phage	87.5	1.0e-23
WP_002308840.1|1259633_1259927_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002331002.1|1259964_1260102_-	XkdX family protein	NA	NA	NA	NA	NA
WP_139438578.1|1260103_1260544_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438581.1|1260555_1262790_-|plate	BppU family phage baseplate upper protein	plate	A0A249XZH9	Enterococcus_phage	56.7	6.0e-104
WP_139438584.1|1262805_1263564_-	hypothetical protein	NA	A0A067XGT4	Enterococcus_phage	32.5	1.5e-27
WP_139438588.1|1263576_1265316_-|plate	BppU family phage baseplate upper protein	plate	Q9AZX4	Lactococcus_phage	38.7	7.6e-38
WP_139438591.1|1265328_1268088_-	CHAP domain-containing protein	NA	D7RWE0	Brochothrix_phage	55.7	1.6e-50
WP_139438594.1|1268084_1268804_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_139438596.1|1268800_1271104_-|tail	phage tail tape measure protein	tail	Q8W5Z7	Listeria_phage	51.1	3.9e-82
WP_002317334.1|1271295_1271760_-	hypothetical protein	NA	A0A2H4J956	uncultured_Caudovirales_phage	39.7	2.2e-16
WP_139438421.1|1271992_1273141_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.1	3.4e-204
WP_002287522.1|1273157_1273562_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_139438599.1|1273647_1274277_-|tail	phage tail protein	tail	A0A2H4JGN2	uncultured_Caudovirales_phage	35.0	9.2e-26
WP_129171694.1|1274282_1274648_-	HK97 gp10 family phage protein	NA	A0A1B2APW9	Phage_Wrath	42.3	5.0e-16
WP_104771771.1|1274637_1274976_-	hypothetical protein	NA	A0A1B1P7P2	Bacillus_phage	46.8	5.1e-23
WP_104771770.1|1274965_1275292_-|head	phage head closure protein	head	A0A0N7IRA3	Lactobacillus_phage	52.0	5.4e-22
WP_139438602.1|1275272_1275551_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1C8E967	Bacillus_phage	61.4	7.9e-22
WP_139438606.1|1275552_1276929_-|capsid	phage major capsid protein	capsid	A0A1B2APY9	Phage_Wrath	63.6	8.2e-128
WP_104771768.1|1276941_1277517_-|head,protease	HK97 family phage prohead protease	head,protease	A0A1B2APW1	Phage_Wrath	71.4	6.8e-68
WP_139438609.1|1277482_1278712_-|portal	phage portal protein	portal	A0A1B2APW5	Phage_Wrath	64.7	1.6e-143
WP_002317343.1|1278733_1280461_-|terminase	terminase large subunit	terminase	A0A2H4JDG5	uncultured_Caudovirales_phage	73.5	2.6e-264
WP_002317344.1|1280457_1280910_-	hypothetical protein	NA	A0A2H4JFK0	uncultured_Caudovirales_phage	68.3	4.2e-49
WP_002317345.1|1281020_1281401_-	HNH endonuclease	NA	A0A1B1P7N1	Bacillus_phage	66.4	3.4e-44
WP_002369123.1|1281397_1281784_-	hypothetical protein	NA	A0A1B1P7N8	Bacillus_phage	35.9	1.0e-11
WP_002317347.1|1281764_1282112_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002301744.1|1282172_1282469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438612.1|1282786_1283266_-	hypothetical protein	NA	A0A2H4JFW6	uncultured_Caudovirales_phage	46.0	5.3e-26
WP_139438615.1|1283599_1284010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139438618.1|1284122_1284539_-	hypothetical protein	NA	Q4ZD40	Staphylococcus_phage	36.4	7.4e-16
WP_139438621.1|1284535_1284730_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438656.1|1284726_1285044_-	DUF1140 family protein	NA	A0A2H4JAZ4	uncultured_Caudovirales_phage	34.3	8.7e-09
WP_010718796.1|1285043_1285241_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002317594.1|1285248_1285437_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438659.1|1285433_1286009_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438662.1|1286060_1286492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139438665.1|1286498_1286960_-	DUF1064 domain-containing protein	NA	A0A2P1JTY5	Anoxybacillus_phage	31.9	3.6e-11
WP_139438746.1|1287101_1287323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438668.1|1287340_1288189_-	ATP-binding protein	NA	A0A2D1GQF9	Lysinibacillus_phage	29.8	4.6e-20
WP_139438670.1|1288188_1288971_-	hypothetical protein	NA	A0A0B5D175	Listeria_phage	67.8	2.5e-41
WP_139438673.1|1288986_1289805_-	hypothetical protein	NA	E9LUM4	Lactobacillus_phage	44.8	3.3e-60
WP_139438676.1|1289764_1290796_-	recombinase RecT	NA	D7RWF9	Brochothrix_phage	48.8	2.6e-62
WP_139438679.1|1290797_1290992_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438683.1|1290984_1291335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053766684.1|1291345_1291570_-	hypothetical protein	NA	D2IZX4	Enterococcus_phage	50.7	6.4e-14
WP_002317358.1|1291846_1292107_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002317359.1|1292120_1292408_-	hypothetical protein	NA	Q9T1I7	Lactobacillus_phage	45.5	2.7e-09
WP_002352846.1|1292611_1293031_+	helix-turn-helix transcriptional regulator	NA	A0A1C8E9A4	Bacillus_phage	57.6	4.1e-38
WP_104771755.1|1293047_1293470_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0B5CTZ7	Listeria_phage	50.7	2.3e-33
WP_002317362.1|1293504_1293705_+	hypothetical protein	NA	A0A097BY73	Enterococcus_phage	89.4	8.4e-26
WP_139438686.1|1293790_1294678_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_104771753.1|1294751_1295900_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	38.4	3.0e-67
WP_002302607.1|1296238_1296805_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
1296002:1296023	attR	ATATAAGGAAGGTACAGGATTT	NA	NA	NA	NA
WP_002293921.1|1297060_1298392_+	DUF1576 domain-containing protein	NA	NA	NA	NA	NA
WP_002293923.1|1298357_1298711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002306407.1|1298802_1299222_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_002293927.1|1299222_1299567_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_002287776.1|1299916_1300513_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	41.7	8.7e-34
WP_002293929.1|1300636_1302436_+	glycerophosphoryl diester phosphodiesterase	NA	I6XE30	Staphylococcus_phage	26.5	5.3e-10
WP_002297633.1|1302713_1302926_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288573.1|1303803_1304190_+	YxeA family protein	NA	NA	NA	NA	NA
WP_002288574.1|1304495_1305842_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_002317577.1|1305953_1307303_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_002330094.1|1307419_1308673_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	55.3	4.5e-24
WP_002330093.1|1308743_1309229_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_002330092.1|1309251_1310004_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	36.8	2.2e-26
WP_002293936.1|1310019_1311198_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	49.2	7.8e-103
WP_002293938.1|1311427_1313548_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	58.3	3.7e-220
WP_099119703.1|1313483_1313759_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002297641.1|1313770_1314496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002332477.1|1314485_1314995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002293941.1|1315064_1316513_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.3	2.3e-19
WP_002293942.1|1316512_1317229_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.7	1.0e-33
>prophage 96
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1343292	1343847	2648833		Lactobacillus_phage(100.0%)	1	NA	NA
WP_002293714.1|1343292_1343847_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	29.3	2.3e-12
>prophage 97
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1347511	1354173	2648833		Bacillus_phage(66.67%)	4	NA	NA
WP_002293705.1|1347511_1348216_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.2	1.4e-38
WP_077836402.1|1348212_1349952_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	34.1	4.2e-28
WP_104874574.1|1350047_1351520_-	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_104880869.1|1351704_1354173_-	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	29.0	7.0e-45
>prophage 98
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1358994	1361221	2648833	transposase,integrase	Lactobacillus_phage(66.67%)	3	1359744:1359758	1371526:1371540
WP_098188703.1|1358994_1360157_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
1359744:1359758	attL	CGACTACTTCTTCAA	NA	NA	NA	NA
WP_002294831.1|1360267_1360960_-	N-acetylmuramoyl-L-alanine amidase	NA	Q9MCC6	Lactobacillus_phage	43.4	2.3e-30
WP_002294833.1|1360954_1361221_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0P0I3D2	Lactobacillus_phage	58.7	2.8e-08
1371526:1371540	attR	CGACTACTTCTTCAA	NA	NA	NA	NA
>prophage 99
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1367889	1378015	2648833		uncultured_virus(50.0%)	7	NA	NA
WP_002296533.1|1367889_1370061_-	copper/silver-translocating P-type ATPase CopB	NA	A0A218MNH6	uncultured_virus	32.3	5.0e-71
WP_002330083.1|1370080_1372267_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	38.6	1.2e-120
WP_002289040.1|1372266_1372476_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_002294855.1|1372488_1372929_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA	NA
WP_002289037.1|1373002_1373542_-	transcriptional regulator	NA	A0A097BYE2	Leuconostoc_phage	34.5	3.8e-20
WP_002288779.1|1374156_1375623_-	amino acid permease	NA	NA	NA	NA	NA
WP_002301949.1|1375933_1378015_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	35.7	8.3e-116
>prophage 100
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1381116	1387376	2648833	tRNA	Moumouvirus(33.33%)	5	NA	NA
WP_002288767.1|1381116_1382415_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.3	1.2e-59
WP_002296294.1|1382454_1383645_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_016631404.1|1383665_1384193_-	DUF5590 domain-containg protein	NA	NA	NA	NA	NA
WP_139438692.1|1384239_1387029_-	DEAD/DEAH box helicase family protein	NA	A0A1X9I5C8	Streptococcus_phage	30.9	1.8e-89
WP_002288762.1|1387175_1387376_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	74.2	2.5e-22
>prophage 101
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1392891	1396768	2648833		Streptococcus_phage(50.0%)	5	NA	NA
WP_002334498.1|1392891_1394160_-	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	31.1	2.8e-42
WP_002323864.1|1394322_1394970_-	elongation factor G-binding protein	NA	NA	NA	NA	NA
WP_002349880.1|1395041_1395245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002336778.1|1395377_1395881_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_002327792.1|1396003_1396768_-	RNA methyltransferase	NA	A0A2D1A6G0	Rhodococcus_phage	26.8	7.5e-06
>prophage 102
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1403966	1406601	2648833		Acanthocystis_turfacea_Chlorella_virus(50.0%)	2	NA	NA
WP_002302186.1|1403966_1405445_+	nucleotide sugar dehydrogenase	NA	M1IB49	Acanthocystis_turfacea_Chlorella_virus	49.3	3.4e-103
WP_002336782.1|1405512_1406601_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A2K9L4U8	Tupanvirus	28.3	2.9e-27
>prophage 103
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1411184	1419325	2648833		Klosneuvirus(25.0%)	8	NA	NA
WP_002336787.1|1411184_1412309_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	50.0	3.3e-103
WP_002336788.1|1412312_1413422_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_002336789.1|1413418_1414441_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	33.7	1.9e-36
WP_002336790.1|1414487_1415372_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_016629175.1|1415368_1416010_-	sugar transferase	NA	NA	NA	NA	NA
WP_139438700.1|1415993_1417811_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	30.1	1.7e-27
WP_002327775.1|1417823_1418588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002332541.1|1418626_1419325_-	CpsD/CapB family tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	37.1	2.1e-26
>prophage 104
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1430625	1439328	2648833		Erwinia_phage(25.0%)	9	NA	NA
WP_002326753.1|1430625_1431597_-	PhoH family protein	NA	W8D063	Erwinia_phage	49.8	2.7e-48
WP_002288744.1|1432280_1433660_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_002287318.1|1433812_1434259_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	39.5	5.3e-20
WP_002287321.1|1434285_1434462_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_002287322.1|1434623_1435052_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_002326754.1|1435143_1436004_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_002296154.1|1436095_1436389_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002319221.1|1436460_1438188_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	63.6	4.4e-211
WP_002289179.1|1438401_1439328_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.4	3.9e-89
>prophage 105
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1446631	1450167	2648833		Bacillus_phage(100.0%)	2	NA	NA
WP_002289169.1|1446631_1448416_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	4.6e-46
WP_002304603.1|1448415_1450167_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	31.2	4.8e-56
>prophage 106
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1454422	1455325	2648833		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_002289444.1|1454422_1455325_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	30.7	1.2e-21
>prophage 107
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1461831	1462770	2648833		Bacillus_phage(100.0%)	1	NA	NA
WP_002289574.1|1461831_1462770_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	51.2	4.2e-75
>prophage 108
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1471160	1472741	2648833		Bacillus_virus(100.0%)	2	NA	NA
WP_002289489.1|1471160_1471919_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.8	3.9e-15
WP_002289486.1|1471934_1472741_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.9	4.2e-15
>prophage 109
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1475811	1480923	2648833	transposase	Enterococcus_phage(33.33%)	5	NA	NA
WP_139438421.1|1475811_1476960_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.1	3.4e-204
WP_002287522.1|1476976_1477381_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002304589.1|1477759_1479208_-	cardiolipin synthase	NA	NA	NA	NA	NA
WP_002317241.1|1479359_1480253_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002292768.1|1480236_1480923_-	cell division ATP-binding protein FtsE	NA	G3M9Y6	Bacillus_virus	25.0	5.5e-16
>prophage 110
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1486405	1489285	2648833		Streptococcus_phage(100.0%)	4	NA	NA
WP_139438709.1|1486405_1487719_-	DEAD/DEAH box helicase family protein	NA	A0A1X9I5S6	Streptococcus_phage	37.9	1.8e-63
WP_002292778.1|1487799_1488120_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002294988.1|1488227_1488515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002304585.1|1488640_1489285_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	50.8	4.6e-49
>prophage 111
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1492903	1493200	2648833		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002289000.1|1492903_1493200_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	58.0	3.0e-19
>prophage 112
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1502413	1505257	2648833		Staphylococcus_phage(50.0%)	2	NA	NA
WP_002289013.1|1502413_1502878_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	59.2	7.7e-46
WP_139438715.1|1502899_1505257_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	41.7	6.8e-98
>prophage 113
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1511271	1512570	2648833		Streptococcus_phage(100.0%)	1	NA	NA
WP_002292812.1|1511271_1512570_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	81.5	3.6e-194
>prophage 114
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1523476	1524844	2648833		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_002295121.1|1523476_1524844_+	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	32.3	1.5e-25
>prophage 115
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1544876	1558208	2648833		Staphylococcus_phage(16.67%)	12	NA	NA
WP_002295091.1|1544876_1545776_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.3	2.1e-23
WP_002295090.1|1545920_1547699_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_002290803.1|1547880_1548195_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	40.8	3.6e-15
WP_002332555.1|1548281_1550642_-	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	50.4	1.7e-24
WP_002295088.1|1550756_1551305_-	CvpA family protein	NA	NA	NA	NA	NA
WP_002295087.1|1551363_1551801_-	cell division protein ZapA	NA	NA	NA	NA	NA
WP_002296459.1|1552002_1552920_+	ribonuclease HIII	NA	NA	NA	NA	NA
WP_127823929.1|1553007_1553919_-	N-acetylmuramoyl-L-alanine amidase	NA	C8CHK8	Thermus_virus	38.9	5.3e-06
WP_002341642.1|1554320_1554899_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002295078.1|1554918_1555587_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.4	8.0e-36
WP_002296464.1|1555601_1556672_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002331581.1|1556843_1558208_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.7	9.3e-07
>prophage 116
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1583177	1584323	2648833	integrase	Lactococcus_phage(100.0%)	1	1580039:1580052	1586592:1586605
1580039:1580052	attL	ATTATTCAAAAATT	NA	NA	NA	NA
WP_104880789.1|1583177_1584323_+|integrase	site-specific integrase	integrase	Q9AZK8	Lactococcus_phage	35.4	7.2e-61
WP_104880789.1|1583177_1584323_+|integrase	site-specific integrase	integrase	Q9AZK8	Lactococcus_phage	35.4	7.2e-61
1586592:1586605	attR	ATTATTCAAAAATT	NA	NA	NA	NA
>prophage 117
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1590030	1590774	2648833		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002300761.1|1590030_1590774_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.3	2.8e-29
>prophage 118
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1595251	1597186	2648833		Tupanvirus(100.0%)	1	NA	NA
WP_002287747.1|1595251_1597186_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	31.9	1.1e-58
>prophage 119
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1611309	1620699	2648833		Bacillus_phage(40.0%)	11	NA	NA
WP_104880897.1|1611309_1612047_-	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	40.0	2.3e-12
WP_002289403.1|1612137_1612665_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289402.1|1612844_1613438_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.6	8.9e-55
WP_002289401.1|1613541_1614027_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_002296291.1|1614179_1614377_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289400.1|1614471_1616232_-	multidrug efflux ABC transporter subunit EfrB	NA	W8CYL7	Bacillus_phage	28.6	2.5e-52
WP_002296290.1|1616228_1617959_-	multidrug efflux ABC transporter subunit EfrA	NA	W8CYL7	Bacillus_phage	27.6	2.1e-43
WP_002287947.1|1618351_1618564_+	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_002287948.1|1618565_1620245_+	ribonuclease J	NA	NA	NA	NA	NA
WP_073119932.1|1620255_1620540_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002294067.1|1620498_1620699_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	71.2	3.7e-21
>prophage 120
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1623861	1626507	2648833	tRNA	Catovirus(100.0%)	1	NA	NA
WP_002287953.1|1623861_1626507_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	42.9	4.0e-163
>prophage 121
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1632573	1633134	2648833		Geobacillus_virus(100.0%)	1	NA	NA
WP_002287958.1|1632573_1633134_-	haloacid dehalogenase	NA	A0A0H3UZF4	Geobacillus_virus	45.1	2.3e-28
>prophage 122
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1638008	1642914	2648833	transposase	Phaeocystis_globosa_virus(50.0%)	5	NA	NA
WP_002294080.1|1638008_1639337_-	aminopeptidase C	NA	R4TV59	Phaeocystis_globosa_virus	38.1	7.3e-73
WP_002287965.1|1640426_1641056_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_002304454.1|1641075_1641258_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287966.1|1641169_1641544_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_086956687.1|1641752_1642914_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
>prophage 123
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1651238	1655426	2648833	transposase	Streptococcus_phage(50.0%)	4	NA	NA
WP_002287167.1|1651238_1651823_-	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	43.4	2.0e-27
WP_104880909.1|1652231_1653482_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.0	6.8e-113
WP_002287165.1|1653806_1654805_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	54.1	2.6e-30
WP_002287163.1|1654916_1655426_+	phosphatidylglycerophosphatase A	NA	G3MBC5	Bacillus_virus	56.1	1.5e-39
>prophage 124
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1673941	1674604	2648833		Bacillus_virus(100.0%)	1	NA	NA
WP_002287128.1|1673941_1674604_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	2.5e-21
>prophage 125
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1680767	1686686	2648833	transposase	Streptococcus_phage(66.67%)	4	NA	NA
WP_002287122.1|1680767_1681649_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	50.3	1.3e-73
WP_104880909.1|1682058_1683309_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.0	6.8e-113
WP_002287121.1|1683474_1684494_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_139438308.1|1685165_1686686_+|transposase	IS1182-like element ISEfa7 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	48.2	2.7e-124
>prophage 126
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1695322	1701443	2648833		Bacillus_phage(66.67%)	5	NA	NA
WP_002294013.1|1695322_1697038_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.3	1.7e-50
WP_002289511.1|1697040_1698804_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.2	1.5e-44
WP_002289509.1|1698843_1699380_-	folate family ECF transporter S component	NA	NA	NA	NA	NA
WP_002289508.1|1699702_1700125_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_002289507.1|1700333_1701443_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	Q6GZ03	Mycoplasma_phage	33.0	1.2e-20
>prophage 127
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1707579	1714373	2648833	tRNA	Bacillus_virus(40.0%)	7	NA	NA
WP_002289325.1|1707579_1709589_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	38.3	1.4e-96
WP_002289337.1|1709856_1710135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002325417.1|1710231_1711053_+	NUDIX hydrolase	NA	G3MA14	Bacillus_virus	32.8	2.7e-25
WP_071974456.1|1711045_1711234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289328.1|1711337_1712348_-	helix-turn-helix domain-containing protein	NA	A0A288TXV8	Enterococcus_phage	40.8	2.8e-56
WP_002289330.1|1712359_1713313_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	33.7	2.2e-18
WP_002289332.1|1713302_1714373_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.5e-20
>prophage 128
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1722765	1728625	2648833		Mycobacterium_phage(33.33%)	4	NA	NA
WP_002289244.1|1722765_1725213_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	50.7	8.1e-86
WP_002289243.1|1725401_1726838_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	29.4	1.4e-48
WP_002289242.1|1727156_1727972_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002289241.1|1727989_1728625_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.4	8.4e-27
>prophage 129
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1736680	1742911	2648833		Moumouvirus(25.0%)	7	NA	NA
WP_002303627.1|1736680_1737628_-	alpha/beta hydrolase	NA	A0A2P1EM31	Moumouvirus	42.0	3.6e-66
WP_002294099.1|1737780_1739025_-	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	55.1	6.7e-105
WP_002294101.1|1739199_1740225_-	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	42.7	1.3e-58
WP_002300130.1|1740246_1740426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002303629.1|1740418_1741258_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_002289676.1|1741250_1742324_-	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_002289675.1|1742326_1742911_-	thymidine kinase	NA	A0A1W6JJU6	Lactococcus_phage	52.1	1.0e-47
>prophage 130
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1751090	1752242	2648833		Micromonas_sp._RCC1109_virus(100.0%)	1	NA	NA
WP_002287246.1|1751090_1752242_-	mannitol-1-phosphate 5-dehydrogenase	NA	E5EQS6	Micromonas_sp._RCC1109_virus	30.0	1.1e-16
>prophage 131
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1762015	1768439	2648833		Bacillus_phage(66.67%)	6	NA	NA
WP_002287263.1|1762015_1763041_-	serine hydrolase	NA	A0A076YS03	Mycobacterium_phage	28.0	2.9e-05
WP_002287264.1|1763249_1764119_-	extradiol dioxygenase	NA	NA	NA	NA	NA
WP_014748731.1|1764258_1764465_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071974455.1|1764459_1764660_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287265.1|1764822_1766715_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.5	1.6e-60
WP_002287267.1|1766711_1768439_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	5.6e-49
>prophage 132
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1776150	1777311	2648833		Streptococcus_phage(100.0%)	1	NA	NA
WP_002287280.1|1776150_1777311_-	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	36.1	1.9e-61
>prophage 133
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1793368	1795677	2648833		Bacillus_virus(100.0%)	2	NA	NA
WP_002287302.1|1793368_1794193_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	56.8	6.1e-78
WP_002287304.1|1794204_1795677_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.0	1.2e-108
>prophage 134
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1799470	1801431	2648833		uncultured_virus(100.0%)	2	NA	NA
WP_002288864.1|1799470_1801096_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.8	2.2e-156
WP_002288862.1|1801146_1801431_-	co-chaperone GroES	NA	A0A221S4M3	uncultured_virus	40.2	2.0e-12
>prophage 135
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1804587	1811229	2648833		Bacillus_phage(50.0%)	6	NA	NA
WP_002288854.1|1804587_1805397_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	33.6	3.1e-34
WP_002288853.1|1805451_1806321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002288852.1|1806321_1807638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002294131.1|1807634_1809470_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	37.7	5.2e-37
WP_002288850.1|1809474_1810179_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.6	5.8e-45
WP_002288847.1|1810368_1811229_-	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	24.4	2.7e-12
>prophage 136
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1816238	1817432	2648833		Bacillus_virus(100.0%)	1	NA	NA
WP_002287805.1|1816238_1817432_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.0	1.2e-29
>prophage 137
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1821495	1830024	2648833		Enterococcus_phage(40.0%)	7	NA	NA
WP_002287795.1|1821495_1821720_+	glutaredoxin-like protein NrdH	NA	A0A0M7REK7	Lactobacillus_phage	42.7	1.7e-11
WP_002287793.1|1821878_1824038_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	63.2	3.8e-265
WP_002287792.1|1824087_1825053_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	70.4	3.4e-128
WP_002287791.1|1825141_1826281_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_002287788.1|1826589_1827303_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	43.7	6.5e-20
WP_002287787.1|1827556_1828258_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_002290558.1|1828491_1830024_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	28.0	3.3e-45
>prophage 138
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1840839	1841343	2648833		Pneumococcus_phage(100.0%)	1	NA	NA
WP_002294548.1|1840839_1841343_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	34.3	3.4e-07
>prophage 139
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1848542	1851104	2648833		Bacillus_phage(100.0%)	1	NA	NA
WP_104880854.1|1848542_1851104_-	ATP-dependent RecD-like DNA helicase	NA	A0A218KCE8	Bacillus_phage	29.2	8.5e-62
>prophage 140
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1865781	1872123	2648833		Gordonia_phage(50.0%)	2	NA	NA
WP_123038666.1|1865781_1868976_-	DEAD/DEAH box helicase family protein	NA	A0A2L1IWL4	Gordonia_phage	28.4	4.1e-37
WP_002301654.1|1868994_1872123_-	SMC family ATPase	NA	A0A068C7W3	Listeria_phage	25.8	5.6e-07
>prophage 141
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1875277	1881487	2648833	tRNA	Pseudomonas_phage(33.33%)	4	NA	NA
WP_002303199.1|1875277_1877161_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	29.9	4.5e-28
WP_002293644.1|1877426_1878302_-	YitT family protein	NA	NA	NA	NA	NA
WP_002289105.1|1878410_1880180_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SJ84	Klosneuvirus	25.3	1.1e-12
WP_002289103.1|1880194_1881487_-|tRNA	histidine--tRNA ligase	tRNA	A0A2I2L577	Orpheovirus	25.8	7.2e-25
>prophage 142
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1884803	1886960	2648833		Orpheovirus(100.0%)	1	NA	NA
WP_123827937.1|1884803_1886960_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	35.8	1.7e-10
>prophage 143
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1890237	1895231	2648833	portal	Bacillus_phage(50.0%)	5	NA	NA
WP_002289088.1|1890237_1891524_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.0	9.4e-110
WP_002293648.1|1891867_1892152_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002293649.1|1892224_1892704_+	universal stress protein	NA	NA	NA	NA	NA
WP_002293650.1|1892926_1893070_+|portal	portal protein	portal	NA	NA	NA	NA
WP_139438330.1|1893647_1895231_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.9	4.9e-52
>prophage 144
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1906632	1907942	2648833		Staphylococcus_phage(50.0%)	2	NA	NA
WP_104880871.1|1906632_1907370_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	8.2e-26
WP_002286201.1|1907507_1907942_+	HIT family protein	NA	D7NW73	Streptomyces_phage	34.1	1.2e-08
>prophage 145
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1938017	1939010	2648833		Enterobacteria_phage(100.0%)	1	NA	NA
WP_002286006.1|1938017_1939010_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	30.2	4.5e-27
>prophage 146
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1945106	1947478	2648833		Bacillus_phage(50.0%)	2	NA	NA
WP_002285995.1|1945106_1946861_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.1	8.2e-40
WP_002285994.1|1947136_1947478_-	YlbF family regulator	NA	A0A1X9I5Y8	Streptococcus_phage	34.9	1.3e-10
>prophage 147
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	1986082	2002981	2648833	tRNA	Bacillus_phage(50.0%)	10	NA	NA
WP_002285920.1|1986082_1987804_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.0	1.7e-37
WP_104880847.1|1987818_1989603_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.2	3.5e-46
WP_139438339.1|1989983_1991537_-	glycosyl hydrolase	NA	NA	NA	NA	NA
WP_002285916.1|1991884_1994299_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	72.8	0.0e+00
WP_002301403.1|1994725_1996744_-	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXE4	Bacillus_phage	39.6	5.8e-13
WP_002285911.1|1997113_1997770_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_002285909.1|1997769_1998726_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	57.4	3.3e-43
WP_002285906.1|1998725_1999292_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	42.8	2.2e-34
WP_002285885.1|1999496_2001266_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.4	1.2e-54
WP_002285883.1|2001268_2002981_-	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	25.4	1.2e-14
>prophage 148
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2006303	2007497	2648833		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002289731.1|2006303_2007497_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	72.0	1.3e-150
>prophage 149
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2015808	2023716	2648833	protease,tRNA	Tupanvirus(25.0%)	6	NA	NA
WP_002296055.1|2015808_2017305_-|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	40.9	8.7e-91
WP_002290055.1|2017415_2018420_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_002296053.1|2018420_2019308_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_002287418.1|2019524_2021636_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	C7U047	Ostreococcus_tauri_virus	50.3	9.1e-110
WP_002287415.1|2021725_2022271_-	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	25.3	4.1e-06
WP_002287414.1|2022270_2023716_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	E3T4I1	Cafeteria_roenbergensis_virus	24.5	6.8e-08
>prophage 150
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2038170	2039748	2648833		Mycobacterium_phage(100.0%)	1	NA	NA
WP_104880916.1|2038170_2039748_-	hypothetical protein	NA	B5LJD6	Mycobacterium_phage	50.5	2.3e-17
>prophage 151
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2043890	2053090	2648833	tRNA	Indivirus(25.0%)	8	NA	NA
WP_002287377.1|2043890_2045960_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	A0A1V0SDC3	Indivirus	30.3	3.5e-21
WP_002287376.1|2045956_2046697_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
WP_139438343.1|2046709_2048068_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_002287372.1|2048067_2049006_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	29.7	5.2e-09
WP_002287369.1|2048998_2049490_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.2	7.9e-17
WP_104880862.1|2049504_2051913_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_002287365.1|2052165_2052471_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_002287358.1|2052475_2053090_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.6	2.2e-24
>prophage 152
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2058539	2063943	2648833		Hokovirus(25.0%)	5	NA	NA
WP_002287347.1|2058539_2059511_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	32.6	4.9e-42
WP_002287346.1|2059604_2060978_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L277	Tupanvirus	36.2	9.9e-33
WP_002287345.1|2061480_2062299_-	pur operon repressor	NA	A0A1V0SKE5	Klosneuvirus	27.1	2.1e-06
WP_002287344.1|2062465_2063290_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_139438347.1|2063262_2063943_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.7	8.7e-14
>prophage 153
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2068867	2072769	2648833		Streptococcus_phage(50.0%)	3	NA	NA
WP_002296027.1|2068867_2069674_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	34.4	1.2e-33
WP_002287336.1|2069752_2071309_-	ribonuclease Y	NA	NA	NA	NA	NA
WP_002287328.1|2071719_2072769_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	67.3	2.6e-126
>prophage 154
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2076807	2079355	2648833		Bodo_saltans_virus(50.0%)	2	NA	NA
WP_002287425.1|2076807_2078094_-	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	27.5	3.9e-07
WP_002287428.1|2078086_2079355_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	37.6	1.8e-65
>prophage 155
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2083459	2084872	2648833	tRNA	Catovirus(100.0%)	1	NA	NA
WP_002287445.1|2083459_2084872_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	31.7	2.0e-52
>prophage 156
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2089980	2094571	2648833	transposase	Streptococcus_phage(75.0%)	4	NA	NA
WP_002287450.1|2089980_2090508_-	dUTP diphosphatase	NA	J9PV85	Bacillus_phage	55.2	2.1e-44
WP_002287107.1|2090917_2092168_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.3	4.0e-113
WP_002287451.1|2092520_2093327_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	3.0e-45
WP_002287452.1|2093323_2094571_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	57.7	2.7e-114
>prophage 157
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2098331	2102996	2648833		Streptococcus_phage(50.0%)	5	NA	NA
WP_002287458.1|2098331_2099810_-	Msr family ABC-F type ribosomal protection protein	NA	A0A1B0RXA0	Streptococcus_phage	42.8	4.3e-90
WP_002391534.1|2099828_2100020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438350.1|2100163_2100793_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_002287461.1|2100776_2101241_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287463.1|2101727_2102996_-	glycoside hydrolase family 73 protein	NA	A0A0K2CP65	Brevibacillus_phage	37.6	1.6e-16
>prophage 158
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2119909	2126545	2648833		Anomala_cuprea_entomopoxvirus(25.0%)	6	NA	NA
WP_002287494.1|2119909_2120845_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	35.1	6.1e-26
WP_002287495.1|2121438_2123088_-	DNA mismatch repair protein MutS	NA	F2QAF9	Pyramimonas_orientalis_virus	25.7	4.9e-18
WP_002287497.1|2123282_2124179_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_002303698.1|2124171_2124852_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.8	1.4e-24
WP_002287500.1|2124852_2125635_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002287502.1|2125627_2126545_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	43.8	4.6e-42
>prophage 159
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2132235	2134040	2648833		Synechococcus_phage(50.0%)	2	NA	NA
WP_002288121.1|2132235_2132913_-	beta-phosphoglucomutase	NA	A0A1D8KNV9	Synechococcus_phage	23.2	1.6e-07
WP_002322826.1|2132909_2134040_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	52.0	5.6e-74
>prophage 160
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2145855	2156627	2648833		Phaeocystis_globosa_virus(33.33%)	5	NA	NA
WP_002295965.1|2145855_2149509_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.9	8.4e-63
WP_002320801.1|2149587_2153214_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.7	1.5e-48
WP_002322823.1|2153932_2154901_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002289390.1|2154918_2155824_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_139438356.1|2155820_2156627_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.1	2.9e-08
>prophage 161
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2171077	2175973	2648833	protease	Phage_TP(50.0%)	3	NA	NA
WP_033582018.1|2171077_2172319_-	U32 family peptidase	NA	Q6DW11	Phage_TP	32.9	7.3e-43
WP_002289033.1|2172336_2173260_-	U32 family peptidase	NA	NA	NA	NA	NA
WP_002289035.1|2173480_2175973_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A0A8J958	Klebsiella_phage	38.3	9.0e-125
>prophage 162
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2183188	2193049	2648833	tRNA	Bacillus_phage(33.33%)	10	NA	NA
WP_002295268.1|2183188_2183878_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	38.1	1.8e-38
WP_002295267.1|2183864_2185073_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	27.3	2.7e-26
WP_010727961.1|2185366_2186638_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.7	4.1e-89
WP_139438359.1|2186630_2186825_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002295264.1|2187187_2188672_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.8	5.6e-98
WP_002299780.1|2189298_2189994_-	DUF1129 domain-containing protein	NA	NA	NA	NA	NA
WP_002293105.1|2190083_2191184_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_002293106.1|2191192_2191384_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_002288806.1|2191404_2192295_-	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	33.5	1.1e-16
WP_002288805.1|2192281_2193049_-	ParA family protein	NA	Q8JL10	Natrialba_phage	33.6	2.8e-29
>prophage 163
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2202422	2210666	2648833		Bacillus_virus(50.0%)	7	NA	NA
WP_010727965.1|2202422_2203553_+	DNA polymerase III subunit beta	NA	A0A0A8IL17	Aurantimonas_phage	25.3	5.5e-29
WP_002295251.1|2203781_2204024_+	S4 domain-containing protein YaaA	NA	NA	NA	NA	NA
WP_002301794.1|2204010_2205135_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_002288364.1|2205131_2207078_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	43.6	2.7e-140
WP_002325156.1|2207097_2209569_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	9.9e-100
WP_002288366.1|2209804_2210104_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_002288368.1|2210153_2210666_+	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	60.0	1.3e-46
>prophage 164
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2213775	2220507	2648833		Streptococcus_phage(25.0%)	4	NA	NA
WP_002288373.1|2213775_2215143_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	54.8	3.0e-130
WP_139438367.1|2215934_2217227_+	adenylosuccinate synthase	NA	G5CQQ4	Megavirus	36.0	1.1e-68
WP_139438370.1|2217892_2218756_+	DegV family EDD domain-containing protein	NA	A0A0N9SI50	Staphylococcus_phage	29.9	8.8e-11
WP_002297801.1|2218884_2220507_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	26.5	1.5e-48
>prophage 165
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2232133	2234141	2648833		Bacillus_virus(50.0%)	2	NA	NA
WP_113795162.1|2232133_2233222_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.1	2.5e-15
WP_002292658.1|2233211_2234141_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.6	3.5e-21
>prophage 166
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2239073	2239640	2648833		Clostridium_phage(100.0%)	1	NA	NA
WP_113795163.1|2239073_2239640_-	helix-turn-helix transcriptional regulator	NA	A0A0A7RUJ5	Clostridium_phage	40.5	1.3e-07
>prophage 167
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2244434	2246000	2648833		Hokovirus(100.0%)	1	NA	NA
WP_002298578.1|2244434_2246000_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	30.6	3.5e-18
>prophage 168
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2249246	2254597	2648833		Geobacillus_virus(33.33%)	5	NA	NA
WP_002298573.1|2249246_2250548_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.2	2.3e-124
WP_002322725.1|2250593_2251256_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_002298572.1|2251276_2251675_+	cytidine deaminase	NA	NA	NA	NA	NA
WP_002289203.1|2251740_2252823_+	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	41.5	9.2e-58
WP_002289202.1|2253034_2254597_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.4	1.7e-20
>prophage 169
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2257967	2266889	2648833		Grouper_iridovirus(25.0%)	9	NA	NA
WP_002289198.1|2257967_2258786_+	purine-nucleoside phosphorylase	NA	Q5YBA4	Grouper_iridovirus	45.8	6.9e-58
WP_002289197.1|2258802_2259510_+	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_002294321.1|2259807_2260494_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_002294320.1|2260665_2261247_-	recombinase family protein	NA	A0A219Y9V9	Aeromonas_phage	34.6	2.2e-18
WP_002322971.1|2261379_2262063_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_002294318.1|2262381_2262795_+	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_002290440.1|2262878_2263349_+	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_139438377.1|2263442_2265530_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.9	2.6e-64
WP_002290442.1|2265701_2266889_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	24.4	6.4e-12
>prophage 170
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2281662	2283347	2648833		Planktothrix_phage(50.0%)	2	NA	NA
WP_002288720.1|2281662_2282502_+	energy-coupling factor ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	1.3e-19
WP_002288722.1|2282477_2283347_+	energy-coupling factor ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.9	6.5e-14
>prophage 171
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2291237	2296905	2648833		uncultured_Caudovirales_phage(33.33%)	5	NA	NA
WP_139438380.1|2291237_2293274_+	ATP-dependent DNA helicase RecG	NA	A0A2H4JBQ0	uncultured_Caudovirales_phage	22.9	1.5e-05
WP_002289721.1|2293322_2294324_+	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_002294295.1|2294445_2294688_+	acyl carrier protein	NA	NA	NA	NA	NA
WP_002287889.1|2294955_2295960_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	5.1e-18
WP_002287891.1|2295960_2296905_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.1	3.9e-20
>prophage 172
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2300962	2301649	2648833		Megavirus(100.0%)	1	NA	NA
WP_002287896.1|2300962_2301649_+	ribonuclease III	NA	K7YH73	Megavirus	32.3	9.1e-27
>prophage 173
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2310221	2312876	2648833		uncultured_Caudovirales_phage(50.0%)	3	NA	NA
WP_002287905.1|2310221_2311172_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.5	3.6e-66
WP_002287906.1|2311164_2312124_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_002287907.1|2312120_2312876_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.0	2.2e-13
>prophage 174
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2322515	2323250	2648833		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_002290500.1|2322515_2323250_-	aquaporin family protein	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	31.4	1.4e-25
>prophage 175
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2326285	2327265	2648833		Bacillus_phage(50.0%)	2	NA	NA
WP_002290506.1|2326285_2326507_+	DUF2829 domain-containing protein	NA	A0A0S2MV93	Bacillus_phage	33.3	1.1e-05
WP_002297149.1|2326503_2327265_+	3-oxoacyl-ACP reductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.7	5.5e-17
>prophage 176
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2333667	2344339	2648833		Catovirus(25.0%)	8	NA	NA
WP_002297135.1|2333667_2336313_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	26.1	3.6e-39
WP_002297134.1|2336330_2338439_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	41.1	1.8e-57
WP_002294256.1|2338460_2339021_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_002297133.1|2339105_2341094_-	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA	NA
WP_002294254.1|2341316_2342030_+	trehalose operon repressor	NA	A0A291LID1	Streptomyces_phage	39.7	1.2e-05
WP_002294252.1|2342106_2342553_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_002290528.1|2342722_2343325_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_002289812.1|2343337_2344339_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.8	2.3e-07
>prophage 177
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2351664	2352405	2648833		Planktothrix_phage(100.0%)	1	NA	NA
WP_002294240.1|2351664_2352405_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	5.5e-30
>prophage 178
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2357385	2357949	2648833		Synechococcus_phage(100.0%)	1	NA	NA
WP_002289284.1|2357385_2357949_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	37.1	2.3e-12
>prophage 179
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2361702	2363694	2648833		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_002289279.1|2361702_2363694_+	potassium transporter Kup	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	33.9	8.4e-65
>prophage 180
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2369997	2376384	2648833		Catovirus(33.33%)	6	NA	NA
WP_002289751.1|2369997_2370627_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	40.2	3.1e-34
WP_002294220.1|2371130_2371733_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	30.6	3.6e-19
WP_002296548.1|2371754_2372243_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002296549.1|2372564_2373938_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002296550.1|2373921_2374359_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_002296551.1|2374638_2376384_-	AarF/ABC1/UbiB kinase family protein	NA	M4R0M8	Ostreococcus_lucimarinus_virus	28.1	6.3e-40
>prophage 181
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2379476	2382984	2648833		Diachasmimorpha_longicaudata_entomopoxvirus(50.0%)	4	NA	NA
WP_085910342.1|2379476_2380994_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.2	2.3e-62
WP_002296554.1|2381123_2381474_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_002296555.1|2381489_2382611_+	alanine racemase	NA	NA	NA	NA	NA
WP_002289874.1|2382621_2382984_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A291I9M9	Lactobacillus_phage	37.8	7.6e-09
>prophage 182
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2394786	2402673	2648833	tRNA,holin	Mycoplasma_phage(33.33%)	5	NA	NA
WP_002294192.1|2394786_2395962_-|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	Q6GZ03	Mycoplasma_phage	32.9	1.0e-17
WP_002296565.1|2396154_2397186_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_002289743.1|2397804_2400444_+	cation-translocating P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	31.2	1.6e-84
WP_002296566.1|2400611_2401310_-	DUF975 family protein	NA	NA	NA	NA	NA
WP_002294183.1|2401527_2402673_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	40.9	2.5e-82
>prophage 183
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2427360	2430482	2648833		Lactobacillus_virus(50.0%)	4	NA	NA
WP_002322895.1|2427360_2428014_+	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	52.3	1.1e-58
WP_002294163.1|2428098_2429004_+	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_002294161.1|2429005_2429638_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002293357.1|2429957_2430482_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	1.4e-14
>prophage 184
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2444580	2445870	2648833		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_002294152.1|2444580_2445870_-	PDZ domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	30.2	5.7e-22
>prophage 185
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2459977	2461105	2648833		Staphylococcus_phage(100.0%)	1	NA	NA
WP_139438398.1|2459977_2461105_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	25.6	5.5e-13
>prophage 186
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2465142	2466372	2648833		Acidithiobacillus_phage(100.0%)	1	NA	NA
WP_123038710.1|2465142_2466372_+	AAA domain-containing protein	NA	K4I1H4	Acidithiobacillus_phage	27.0	8.3e-23
>prophage 187
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2479517	2481398	2648833		Streptococcus_phage(100.0%)	1	NA	NA
WP_104880902.1|2479517_2481398_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	34.0	1.3e-99
>prophage 188
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2505085	2506219	2648833		Synechococcus_phage(100.0%)	1	NA	NA
WP_002287572.1|2505085_2506219_-	alcohol dehydrogenase catalytic domain-containing protein	NA	E3SJ82	Synechococcus_phage	24.8	2.5e-13
>prophage 189
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2517055	2519608	2648833		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_002287556.1|2517055_2519608_+	HAD-IC family P-type ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	29.7	3.6e-68
>prophage 190
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2541144	2546098	2648833		Moraxella_phage(50.0%)	3	NA	NA
WP_002294686.1|2541144_2542458_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	32.1	6.8e-47
WP_002296775.1|2542785_2544408_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_002322722.1|2544601_2546098_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	22.4	5.8e-26
>prophage 191
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2560793	2561510	2648833		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_002292560.1|2560793_2561510_+	aquaporin family protein	NA	M1HVL5	Acanthocystis_turfacea_Chlorella_virus	36.9	1.6e-29
>prophage 192
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2565912	2566227	2648833		Ostreococcus_tauri_virus(100.0%)	1	NA	NA
WP_002294651.1|2565912_2566227_+	rhodanese-like domain-containing protein	NA	E4WM79	Ostreococcus_tauri_virus	39.1	3.4e-05
>prophage 193
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2579102	2584043	2648833	tRNA	Staphylococcus_phage(50.0%)	4	NA	NA
WP_002294635.1|2579102_2579984_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.4	3.3e-21
WP_002294634.1|2580237_2580837_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002296829.1|2580905_2582207_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_002286405.1|2582786_2584043_+|tRNA	tyrosine--tRNA ligase	tRNA	A0A1L2CUL7	Pectobacterium_phage	42.5	9.0e-81
>prophage 194
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2591673	2597051	2648833		Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
WP_002286375.1|2591673_2592339_-	beta-phosphoglucomutase	NA	M1I080	Acanthocystis_turfacea_Chlorella_virus	28.9	8.0e-12
WP_002286373.1|2592331_2594626_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
WP_002286368.1|2594885_2597051_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	32.7	1.9e-06
>prophage 195
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2610778	2614971	2648833		Bacillus_phage(66.67%)	3	NA	NA
WP_002337900.1|2610778_2613115_-	ABC transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	38.4	3.1e-34
WP_002286323.1|2613256_2613925_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	45.0	6.9e-48
WP_002294614.1|2613927_2614971_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	41.1	1.3e-53
>prophage 196
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2620990	2621743	2648833		Planktothrix_phage(100.0%)	1	NA	NA
WP_002286304.1|2620990_2621743_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	4.9e-34
>prophage 197
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2624927	2627072	2648833		Clostridium_phage(100.0%)	1	NA	NA
WP_002337897.1|2624927_2627072_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0A8WF62	Clostridium_phage	44.7	7.5e-19
>prophage 198
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2632128	2632830	2648833		Planktothrix_phage(100.0%)	1	NA	NA
WP_002296067.1|2632128_2632830_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	1.6e-34
>prophage 199
NZ_CP040907	Enterococcus faecium strain FB-1 chromosome, complete genome	2648833	2642456	2646798	2648833	transposase	Streptococcus_phage(33.33%)	5	NA	NA
WP_002287522.1|2642456_2642861_+|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_139438421.1|2642877_2644026_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.1	3.4e-204
WP_002296063.1|2644713_2645316_-	accessory gene regulator B	NA	NA	NA	NA	NA
WP_002286271.1|2645560_2645767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002321450.1|2646078_2646798_+	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	47.7	1.8e-49
>prophage 1
NZ_CP040906	Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence	133232	0	74858	133232	holin,protease,transposase	Enterococcus_phage(27.78%)	78	NA	NA
WP_065305699.1|389_1451_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002305052.1|1635_2067_-	antitoxin HicB	NA	F0PIL2	Enterococcus_phage	64.9	4.3e-43
WP_065305698.1|2100_2286_-	addiction module toxin, HicA family	NA	F0PIL1	Enterococcus_phage	91.8	5.4e-27
WP_065305697.1|2409_2589_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065305696.1|2604_2805_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065305695.1|2969_3677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065305694.1|3669_4107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065305693.1|4121_4373_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065305692.1|4372_4579_-	DNA helicase UvrA	NA	NA	NA	NA	NA
WP_049055261.1|5022_5283_-	hypothetical protein	NA	A0A0S2MYI8	Enterococcus_phage	52.0	1.4e-12
WP_065305691.1|5357_5561_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_065305690.1|5720_5978_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065305689.1|5999_6473_-	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	62.0	2.5e-44
WP_002303483.1|6475_7375_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_002299811.1|7387_7984_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_048946614.1|8229_10434_-	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	50.9	4.7e-117
WP_139438770.1|10444_11905_-	toprim domain-containing protein	NA	NA	NA	NA	NA
WP_060797393.1|11965_14338_-	hypothetical protein	NA	B5SP25	Lactococcus_phage	29.2	2.9e-11
WP_104880909.1|14747_15998_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	63.0	6.8e-113
WP_010726515.1|16133_16328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002310991.1|16468_16804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021109222.1|16815_18408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438768.1|18426_18849_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438789.1|18850_19147_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438768.1|19273_19696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002293513.1|19697_19994_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002322839.1|20650_22048_-	hypothetical protein	NA	NA	NA	NA	NA
WP_073466418.1|22044_22917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321289.1|23180_23411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002321288.1|23433_24240_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002295647.1|24250_24895_-	hypothetical protein	NA	NA	NA	NA	NA
WP_073466413.1|24910_26116_-	peptidoglycan DD-metalloendopeptidase family protein	NA	Q6SEC2	Lactobacillus_prophage	41.8	4.3e-32
WP_139438764.1|26115_28140_-	ATPase	NA	NA	NA	NA	NA
WP_073466393.1|28309_28888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_073466391.1|28912_29506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080490513.1|29506_29839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_073466387.1|29890_32287_-	hypothetical protein	NA	NA	NA	NA	NA
WP_073466385.1|32283_34896_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA	NA
WP_073466383.1|34895_36959_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002307546.1|37023_37326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002305229.1|37343_37586_-	DUF5415 family protein	NA	NA	NA	NA	NA
WP_073466382.1|37582_38047_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002300033.1|38235_38427_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139438761.1|38570_40637_+|protease	serine protease	protease	NA	NA	NA	NA
WP_073466321.1|40672_42763_-	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_002293489.1|42759_43020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099097754.1|43032_43794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096157791.1|43809_44562_-	class C sortase	NA	NA	NA	NA	NA
WP_139438305.1|44576_46553_-	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_139438304.1|46605_47277_-	sortase	NA	NA	NA	NA	NA
WP_139438303.1|48362_48602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002347362.1|48667_48907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002317437.1|49073_49256_-	DUF5406 family protein	NA	F0PIH7	Enterococcus_phage	57.9	7.7e-10
WP_002322486.1|50033_50366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438302.1|51204_52245_-	replication protein RepA	NA	NA	NA	NA	NA
WP_139438301.1|53375_54839_-|transposase	IS1182-like element ISEfa7 family transposase	transposase	A0A1X9I5T2	Streptococcus_phage	48.2	2.6e-124
WP_002298774.1|55046_56021_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002312606.1|56002_56464_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002298777.1|56513_56978_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002298779.1|56991_57741_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_138222762.1|57740_58571_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002298781.1|58570_59218_+	HAD family phosphatase	NA	M1I080	Acanthocystis_turfacea_Chlorella_virus	27.2	1.7e-11
WP_139438300.1|59315_60092_-	UTRA domain-containing protein	NA	NA	NA	NA	NA
WP_010782720.1|60433_61612_-|transposase	IS256-like element ISEfm2 family transposase	transposase	NA	NA	NA	NA
WP_131793362.1|61729_62383_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	35.2	8.1e-25
WP_139438299.1|62410_62635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139438297.1|62682_63975_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_077727557.1|63968_64655_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.5	7.7e-26
WP_139438294.1|64825_65320_+	chitinase	NA	NA	NA	NA	NA
WP_139438292.1|65331_66555_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_139438290.1|66558_68004_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_005342381.1|68017_68653_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.2	1.7e-24
WP_139438288.1|68921_70217_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
WP_139438285.1|70632_71772_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	D9J0Y9	Brochothrix_phage	76.0	1.5e-167
WP_086291438.1|71783_72173_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	43.1	4.1e-24
WP_086291415.1|72559_72814_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_139438282.1|72814_73162_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_139438279.1|74000_74858_+	AAA family ATPase	NA	F0PIG8	Enterococcus_phage	29.2	2.0e-31
>prophage 2
NZ_CP040906	Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence	133232	82799	83831	133232		Bacillus_virus(100.0%)	1	NA	NA
WP_002302261.1|82799_83831_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.6	1.8e-26
>prophage 3
NZ_CP040906	Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence	133232	93442	93805	133232	transposase	Streptococcus_phage(100.0%)	1	NA	NA
WP_139927368.1|93442_93805_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	42.6	1.4e-15
>prophage 4
NZ_CP040906	Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence	133232	100936	116584	133232	integrase,transposase	Streptococcus_phage(28.57%)	16	93947:93986	113675:113714
93947:93986	attL	CATCACCCACCTATAGAGGATGGGCGACTTCTGCCTAATT	NA	NA	NA	NA
WP_086956687.1|100936_102099_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_002322543.1|102425_102617_-	fructokinase	NA	NA	NA	NA	NA
WP_002305874.1|102662_102911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139438781.1|103277_103796_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_002313170.1|104138_104342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139438777.1|104932_105340_-	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A0N9SKD8	Staphylococcus_phage	39.1	1.0e-14
WP_074399858.1|105336_105570_-	addiction module antitoxin	NA	NA	NA	NA	NA
WP_002295762.1|105889_106975_+	tyrosine recombinase XerS	NA	NA	NA	NA	NA
WP_002318477.1|107038_107593_-|integrase	tyrosine-type recombinase/integrase	integrase	W8CYP1	Bacillus_phage	46.1	8.6e-36
WP_139438288.1|108124_109420_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	37.5	3.9e-55
WP_086316100.1|109524_110127_-	RloB domain-containing protein	NA	NA	NA	NA	NA
WP_126341265.1|110129_111743_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_139438421.1|111986_113135_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A288TXV8	Enterococcus_phage	93.1	3.4e-204
WP_002287522.1|113151_113556_-|transposase	IS200/IS605-like element ISEfa4 family transposase	transposase	A0A286QN76	Streptococcus_phage	73.8	1.3e-52
WP_002345823.1|113961_114861_-	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
113675:113714	attR	CATCACCCACCTATAGAGGATGGGCGACTTCTGCCTAATT	NA	NA	NA	NA
WP_002290548.1|115177_116584_-	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	29.0	3.6e-46
>prophage 5
NZ_CP040906	Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence	133232	120712	131153	133232	transposase	Synechococcus_phage(20.0%)	8	NA	NA
WP_070828487.1|120712_121228_-	galactose-6-phosphate isomerase subunit LacB	NA	A0A222YX14	Synechococcus_phage	36.0	3.3e-05
WP_002290555.1|121244_121670_-	galactose-6-phosphate isomerase subunit LacA	NA	NA	NA	NA	NA
WP_002345826.1|122158_122926_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_106018936.1|122930_123578_+	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_086956687.1|123683_124846_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_099097800.1|127651_128611_+|transposase	IS30-like element IS6770 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.2	3.6e-37
WP_065305703.1|129795_130410_-	recombinase family protein	NA	M9Q1K0	Clostridium_phage	40.0	4.5e-17
WP_065305702.1|130562_131153_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	50.8	4.5e-43
