The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP041090	Bradyrhizobium symbiodeficiens strain 65S1MB chromosome, complete genome	7132395	852760	862149	7132395		Escherichia_phage(42.86%)	9	NA	NA
WP_140477869.1|852760_853492_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	28.6	3.0e-12
WP_140477871.1|853475_854180_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	24.9	4.9e-12
WP_140477873.1|854286_854475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162406332.1|854467_855157_-	aldolase	NA	A0A077SK32	Escherichia_phage	47.8	9.7e-45
WP_140477877.1|855261_856179_+	NAD-binding protein	NA	A0A077SLF7	Escherichia_phage	47.4	7.8e-66
WP_140477879.1|856193_856976_+	TIM barrel protein	NA	NA	NA	NA	NA
WP_140477881.1|856972_858259_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	42.5	2.2e-74
WP_140477883.1|858428_860120_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	53.1	4.0e-15
WP_094975294.1|860460_862149_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	53.1	3.9e-15
>prophage 2
NZ_CP041090	Bradyrhizobium symbiodeficiens strain 65S1MB chromosome, complete genome	7132395	1760132	1829404	7132395	tail,plate,holin	Aeromonas_phage(10.0%)	45	NA	NA
WP_162406425.1|1760132_1762022_-|plate	putative baseplate assembly protein	plate	NA	NA	NA	NA
WP_140478955.1|1762021_1767157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140483351.1|1767153_1767582_-	GPW/gp25 family protein	NA	E5DQC6	Aeromonas_phage	35.4	3.4e-08
WP_140478957.1|1767587_1767878_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140478959.1|1767885_1768527_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_140478961.1|1768523_1769627_-	phage late control D family protein	NA	NA	NA	NA	NA
WP_140478963.1|1769604_1770273_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_140478965.1|1770280_1771318_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140478967.1|1771320_1771746_-|tail	phage tail protein	tail	A0A059XP77	uncultured_phage	30.0	2.9e-07
WP_140478969.1|1771751_1771934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038967634.1|1772341_1772776_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_140478971.1|1772789_1774364_-|tail	phage tail sheath family protein	tail	J9PVC2	Bacillus_phage	33.7	8.9e-62
WP_140478973.1|1774436_1775444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140478975.1|1775457_1776246_-	hypothetical protein	NA	NA	NA	NA	NA
WP_051000385.1|1776235_1776811_-	DUF4255 domain-containing protein	NA	NA	NA	NA	NA
WP_162406427.1|1776818_1779335_-	AAA family ATPase	NA	A0A2D2W2A9	Stenotrophomonas_phage	34.6	1.4e-08
WP_140478980.1|1780111_1782268_-	exonuclease	NA	A0A0A7RWA3	Clostridium_phage	30.9	2.9e-18
WP_140478982.1|1782519_1783896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140478984.1|1784579_1786187_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_140478985.1|1787152_1787950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162406429.1|1788316_1792543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140478989.1|1792751_1793030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140478991.1|1793624_1795076_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140478993.1|1795072_1796455_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140478995.1|1796451_1797327_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140478997.1|1797330_1798677_+	SPASM domain-containing protein	NA	NA	NA	NA	NA
WP_162406431.1|1798673_1800062_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_140479001.1|1800077_1800632_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140479002.1|1800822_1803801_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_140479004.1|1803916_1804375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140479006.1|1805443_1806433_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_140479008.1|1806752_1808189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140479010.1|1808392_1813924_-	AAA family ATPase	NA	A0A2H4N7Z5	Lake_Baikal_phage	38.0	5.2e-32
WP_140479012.1|1813935_1815240_-	tryptophan 7-halogenase	NA	M4T1E3	Cyanophage	37.8	8.9e-07
WP_162406433.1|1815236_1816490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140479016.1|1816536_1817139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140479018.1|1817164_1819435_-	TOMM precursor leader peptide-binding protein	NA	NA	NA	NA	NA
WP_162406435.1|1819882_1821130_-	cytochrome P450	NA	I6WI04	Cotesia_sesamiae_Mombasa_bracovirus	30.5	5.7e-11
WP_162406437.1|1821129_1821792_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162406439.1|1822014_1822521_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA	NA
WP_140479024.1|1823980_1824976_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_140479026.1|1824998_1825808_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	39.5	1.4e-31
WP_140479028.1|1825804_1826575_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_140479030.1|1826681_1827809_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_140479032.1|1827808_1829404_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	29.8	2.5e-51
>prophage 3
NZ_CP041090	Bradyrhizobium symbiodeficiens strain 65S1MB chromosome, complete genome	7132395	2572074	2582104	7132395	tRNA	uncultured_Mediterranean_phage(88.89%)	12	NA	NA
WP_140479871.1|2572074_2573475_-	peptidoglycan DD-metalloendopeptidase family protein	NA	Q8SBN9	Clostridium_phage	41.8	4.9e-19
WP_162308903.1|2573584_2574202_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	51.2	2.3e-29
WP_094977798.1|2574463_2574835_+	response regulator	NA	NA	NA	NA	NA
WP_162308566.1|2574838_2575606_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	38.0	4.8e-37
WP_094977796.1|2575701_2576064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094977795.1|2576140_2577472_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.8	5.2e-95
WP_094977794.1|2577608_2578421_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	48.0	1.2e-54
WP_140479872.1|2578417_2578963_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_028145381.1|2579051_2579285_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	63.6	5.4e-08
WP_162406531.1|2579453_2580218_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	49.7	9.1e-44
WP_140479874.1|2580239_2581079_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	36.7	2.0e-31
WP_140479875.1|2581075_2582104_-	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	41.2	1.3e-21
>prophage 4
NZ_CP041090	Bradyrhizobium symbiodeficiens strain 65S1MB chromosome, complete genome	7132395	5762186	5771045	7132395		Mycobacterium_phage(16.67%)	7	NA	NA
WP_140481719.1|5762186_5762930_+	AAA family ATPase	NA	W8ECJ6	Mycobacterium_phage	28.8	1.9e-09
WP_140481720.1|5763065_5763965_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	29.1	1.7e-20
WP_094976086.1|5764046_5764808_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_140481721.1|5764804_5766379_+	2-polyprenylphenol 6-hydroxylase	NA	A0A0P0CRP3	Ostreococcus_lucimarinus_virus	24.1	9.3e-27
WP_140481722.1|5766445_5767894_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	31.0	2.9e-35
WP_140481723.1|5767890_5768349_+	dUTP diphosphatase	NA	K4JSC8	Caulobacter_phage	58.6	5.4e-36
WP_094976082.1|5768540_5771045_+	PAS domain-containing protein	NA	W8CYF6	Bacillus_phage	28.8	6.5e-22
