assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006575625.1_ASM657562v1	NZ_CP041257	Enterococcus faecium strain 515 chromosome, complete genome	1	1563311-1563420	1	CRISPRCasFinder	no		cas2,DinG,cas14j,cas3,DEDDh,csa3,RT	Orphan	CTTTGCTCAACCAGTATTATTCATCA	26	0	0	NA	NA	NA	1	1	Orphan	cas2,DinG,cas14j,cas3,DEDDh,csa3,RT,c2c10_CAS-V-U3	NA,NA	NA|720aa|up_9|NZ_CP041257.1_1551898_1554058_+	PRK07306, PRK07306, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|322aa|up_8|NZ_CP041257.1_1554107_1555073_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|380aa|up_7|NZ_CP041257.1_1555161_1556301_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|238aa|up_6|NZ_CP041257.1_1556609_1557323_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|234aa|up_5|NZ_CP041257.1_1557576_1558278_-	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|511aa|up_4|NZ_CP041257.1_1558511_1560044_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|401aa|up_3|NZ_CP041257.1_1560234_1561437_-	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|230aa|up_2|NZ_CP041257.1_1561518_1562208_-	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|123aa|up_1|NZ_CP041257.1_1562313_1562682_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|168aa|up_0|NZ_CP041257.1_1562734_1563238_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|230aa|down_0|NZ_CP041257.1_1563647_1564337_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|141aa|down_1|NZ_CP041257.1_1564440_1564863_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|223aa|down_2|NZ_CP041257.1_1565205_1565874_+	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism]	NA|291aa|down_3|NZ_CP041257.1_1565886_1566759_+	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|340aa|down_4|NZ_CP041257.1_1566849_1567869_-	cd04737, LOX_like_FMN, L-Lactate oxidase (LOX) FMN-binding domain	NA|296aa|down_5|NZ_CP041257.1_1568041_1568929_-	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915)	NA|182aa|down_6|NZ_CP041257.1_1569005_1569551_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|57aa|down_7|NZ_CP041257.1_1569651_1569822_-	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex	NA|51aa|down_8|NZ_CP041257.1_1569845_1569998_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|215aa|down_9|NZ_CP041257.1_1570159_1570804_+	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily
GCF_006575625.1_ASM657562v1	NZ_CP041256	Enterococcus faecium strain 515 plasmid p26, complete sequence	1	129146-129274	1	CRISPRCasFinder	no	cas14j	cas14j	Unclear	GGTATGATTTTCATACCCTCTTGA	24	0	0	NA	NA	NA	2	2	TypeV	cas2,DinG,cas14j,cas3,DEDDh,csa3,RT,c2c10_CAS-V-U3	NA|78aa|up_9|NZ_CP041256.1_116107_116341_-,NA|44aa|up_6|NZ_CP041256.1_118627_118759_-,NA|791aa|up_3|NZ_CP041256.1_122276_124649_-,NA|111aa|up_0|NZ_CP041256.1_127505_127838_-,NA|65aa|down_0|NZ_CP041256.1_131053_131248_+	NA|78aa|up_9|NZ_CP041256.1_116107_116341_-	NA	NA|300aa|up_8|NZ_CP041256.1_116873_117773_-	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|199aa|up_7|NZ_CP041256.1_117785_118382_-	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin	NA|44aa|up_6|NZ_CP041256.1_118627_118759_-	NA	NA|670aa|up_5|NZ_CP041256.1_118727_120737_-	PRK07726, PRK07726, DNA topoisomerase 3	NA|485aa|up_4|NZ_CP041256.1_120747_122202_-	pfam13155, Toprim_2, Toprim-like	NA|791aa|up_3|NZ_CP041256.1_122276_124649_-	NA	NA|417aa|up_2|NZ_CP041256.1_125058_126309_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|114aa|up_1|NZ_CP041256.1_126545_126887_-	pfam17400, DUF5406, Family of unknown function (DUF5406)	NA|111aa|up_0|NZ_CP041256.1_127505_127838_-	NA	NA|65aa|down_0|NZ_CP041256.1_131053_131248_+	NA	cas14j|383aa|down_1|NZ_CP041256.1_131954_133103_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|135aa|down_2|NZ_CP041256.1_133119_133524_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|85aa|down_3|NZ_CP041256.1_133882_134137_+	TIGR02609, hypothetical_protein_XAC1195, putative addiction module antidote	NA|106aa|down_4|NZ_CP041256.1_134137_134455_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|303aa|down_5|NZ_CP041256.1_135088_135997_-	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|95aa|down_6|NZ_CP041256.1_137606_137891_+	pfam09639, YjcQ, YjcQ protein	NA|66aa|down_7|NZ_CP041256.1_139012_139210_-	COG1278, CspC, Cold shock proteins [Transcription]	NA|318aa|down_8|NZ_CP041256.1_139405_140359_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|117aa|down_9|NZ_CP041256.1_140428_140779_+	PRK10514, PRK10514, putative acetyltransferase; Provisional
GCF_006575625.1_ASM657562v1	NZ_CP041255	Enterococcus faecium strain 515 plasmid p32, complete sequence	1	26985-27087	1	CRISPRCasFinder	no	c2c10_CAS-V-U3	c2c10_CAS-V-U3	Type V-U3	ATTTGAGAACCATGTCGTTTTATATAGCTCCAAAAC	36	1	1	27021-27050	NZ_CP041255.1_47830-47859	NA	1	1	TypeV-U3	cas2,DinG,cas14j,cas3,DEDDh,csa3,RT,c2c10_CAS-V-U3	NA|188aa|up_9|NZ_CP041255.1_22315_22879_-,NA|106aa|up_8|NZ_CP041255.1_23046_23364_-,NA|68aa|up_7|NZ_CP041255.1_23375_23579_-,NA|64aa|up_6|NZ_CP041255.1_23608_23800_-,NA|84aa|up_5|NZ_CP041255.1_23840_24092_-,NA|63aa|up_4|NZ_CP041255.1_24084_24273_-,NA|63aa|up_3|NZ_CP041255.1_24373_24562_-,c2c10_CAS-V-U3|391aa|down_0|NZ_CP041255.1_27577_28750_-,NA|66aa|down_2|NZ_CP041255.1_29958_30156_-,NA|106aa|down_3|NZ_CP041255.1_30166_30484_-,NA|73aa|down_4|NZ_CP041255.1_30520_30739_-,NA|64aa|down_5|NZ_CP041255.1_30847_31039_-,NA|119aa|down_6|NZ_CP041255.1_31200_31557_-,NA|87aa|down_8|NZ_CP041255.1_32622_32883_-	NA|188aa|up_9|NZ_CP041255.1_22315_22879_-	NA	NA|106aa|up_8|NZ_CP041255.1_23046_23364_-	NA	NA|68aa|up_7|NZ_CP041255.1_23375_23579_-	NA	NA|64aa|up_6|NZ_CP041255.1_23608_23800_-	NA	NA|84aa|up_5|NZ_CP041255.1_23840_24092_-	NA	NA|63aa|up_4|NZ_CP041255.1_24084_24273_-	NA	NA|63aa|up_3|NZ_CP041255.1_24373_24562_-	NA	NA|204aa|up_2|NZ_CP041255.1_24800_25412_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|261aa|up_1|NZ_CP041255.1_25451_26234_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|188aa|up_0|NZ_CP041255.1_26247_26811_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	c2c10_CAS-V-U3|391aa|down_0|NZ_CP041255.1_27577_28750_-	NA	NA|323aa|down_1|NZ_CP041255.1_28993_29962_-	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown]	NA|66aa|down_2|NZ_CP041255.1_29958_30156_-	NA	NA|106aa|down_3|NZ_CP041255.1_30166_30484_-	NA	NA|73aa|down_4|NZ_CP041255.1_30520_30739_-	NA	NA|64aa|down_5|NZ_CP041255.1_30847_31039_-	NA	NA|119aa|down_6|NZ_CP041255.1_31200_31557_-	NA	NA|335aa|down_7|NZ_CP041255.1_31581_32586_-	pfam13155, Toprim_2, Toprim-like	NA|87aa|down_8|NZ_CP041255.1_32622_32883_-	NA	NA|358aa|down_9|NZ_CP041255.1_32891_33965_-	pfam18760, ART-PolyVal, ADP-Ribosyltransferase in polyvalent proteins
GCF_006575625.1_ASM657562v1	NZ_CP041255	Enterococcus faecium strain 515 plasmid p32, complete sequence	2	27231-27470	2	CRISPRCasFinder	no	c2c10_CAS-V-U3	c2c10_CAS-V-U3	Type V-U3	ATTTGAGAACCATGTCGTTTTATATAGCTCCAAAAC	36	0	0	NA	NA	NA	3	3	TypeV-U3	cas2,DinG,cas14j,cas3,DEDDh,csa3,RT,c2c10_CAS-V-U3	NA|188aa|up_9|NZ_CP041255.1_22315_22879_-,NA|106aa|up_8|NZ_CP041255.1_23046_23364_-,NA|68aa|up_7|NZ_CP041255.1_23375_23579_-,NA|64aa|up_6|NZ_CP041255.1_23608_23800_-,NA|84aa|up_5|NZ_CP041255.1_23840_24092_-,NA|63aa|up_4|NZ_CP041255.1_24084_24273_-,NA|63aa|up_3|NZ_CP041255.1_24373_24562_-,c2c10_CAS-V-U3|391aa|down_0|NZ_CP041255.1_27577_28750_-,NA|66aa|down_2|NZ_CP041255.1_29958_30156_-,NA|106aa|down_3|NZ_CP041255.1_30166_30484_-,NA|73aa|down_4|NZ_CP041255.1_30520_30739_-,NA|64aa|down_5|NZ_CP041255.1_30847_31039_-,NA|119aa|down_6|NZ_CP041255.1_31200_31557_-,NA|87aa|down_8|NZ_CP041255.1_32622_32883_-	NA|188aa|up_9|NZ_CP041255.1_22315_22879_-	NA	NA|106aa|up_8|NZ_CP041255.1_23046_23364_-	NA	NA|68aa|up_7|NZ_CP041255.1_23375_23579_-	NA	NA|64aa|up_6|NZ_CP041255.1_23608_23800_-	NA	NA|84aa|up_5|NZ_CP041255.1_23840_24092_-	NA	NA|63aa|up_4|NZ_CP041255.1_24084_24273_-	NA	NA|63aa|up_3|NZ_CP041255.1_24373_24562_-	NA	NA|204aa|up_2|NZ_CP041255.1_24800_25412_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|261aa|up_1|NZ_CP041255.1_25451_26234_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|188aa|up_0|NZ_CP041255.1_26247_26811_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	c2c10_CAS-V-U3|391aa|down_0|NZ_CP041255.1_27577_28750_-	NA	NA|323aa|down_1|NZ_CP041255.1_28993_29962_-	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown]	NA|66aa|down_2|NZ_CP041255.1_29958_30156_-	NA	NA|106aa|down_3|NZ_CP041255.1_30166_30484_-	NA	NA|73aa|down_4|NZ_CP041255.1_30520_30739_-	NA	NA|64aa|down_5|NZ_CP041255.1_30847_31039_-	NA	NA|119aa|down_6|NZ_CP041255.1_31200_31557_-	NA	NA|335aa|down_7|NZ_CP041255.1_31581_32586_-	pfam13155, Toprim_2, Toprim-like	NA|87aa|down_8|NZ_CP041255.1_32622_32883_-	NA	NA|358aa|down_9|NZ_CP041255.1_32891_33965_-	pfam18760, ART-PolyVal, ADP-Ribosyltransferase in polyvalent proteins
