The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040640	Agrobacterium sp. T29 chromosome circular, complete sequence	3009322	638318	645650	3009322	protease,head,tail,portal,capsid	Geobacillus_phage(33.33%)	11	NA	NA
WP_142778913.1|638318_639485_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	38.0	1.0e-62
WP_020808622.1|639680_640001_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142778914.1|640029_640602_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	45.6	1.2e-27
WP_137003130.1|640632_641901_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	43.2	1.2e-77
WP_142778915.1|642079_642649_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020808625.1|642652_642988_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_142778916.1|642984_643380_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_168207993.1|643387_644587_-	MFS transporter	NA	NA	NA	NA	NA
WP_003521219.1|644677_645085_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_059753802.1|645084_645444_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_125144629.1|645440_645650_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
>prophage 2
NZ_CP040640	Agrobacterium sp. T29 chromosome circular, complete sequence	3009322	1394020	1402298	3009322	tRNA	uncultured_Mediterranean_phage(66.67%)	8	NA	NA
WP_142779293.1|1394020_1395553_+	AMP-binding protein	NA	A0A2K9L3I8	Tupanvirus	23.6	1.5e-21
WP_168208030.1|1395536_1396814_+	type III PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_142779294.1|1396933_1398091_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	48.1	3.4e-42
WP_080856425.1|1398128_1399259_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	53.0	8.0e-105
WP_142779295.1|1399258_1400341_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_020810245.1|1400657_1401167_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.8	8.4e-46
WP_142779296.1|1401204_1401774_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.2	4.2e-46
WP_020810243.1|1401803_1402298_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	39.0	2.9e-27
>prophage 3
NZ_CP040640	Agrobacterium sp. T29 chromosome circular, complete sequence	3009322	1418701	1427257	3009322	tRNA	uncultured_Mediterranean_phage(75.0%)	9	NA	NA
WP_168208031.1|1418701_1420267_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	30.4	1.1e-11
WP_003522731.1|1420612_1421266_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1J0MC37	Streptomyces_phage	35.1	1.0e-11
WP_003522730.1|1421262_1422033_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	29.9	6.2e-24
WP_059760200.1|1422239_1423523_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.8	1.8e-97
WP_003522727.1|1423624_1424428_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	39.9	9.9e-41
WP_142779309.1|1424424_1425192_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_003509722.1|1425349_1425556_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	69.8	2.1e-08
WP_142779310.1|1425684_1426419_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.6	7.6e-40
WP_003522723.1|1426408_1427257_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.2	1.1e-34
>prophage 1
NZ_CP040641	Agrobacterium sp. T29 chromosome linear, complete sequence	2191277	742169	762379	2191277	transposase,integrase	Ochrobactrum_phage(50.0%)	31	734853:734869	765396:765412
734853:734869	attL	GGCATTGATGGCGGCGG	NA	NA	NA	NA
WP_142780683.1|742169_742544_+	hypothetical protein	NA	A0A219VHC3	Ochrobactrum_phage	47.9	3.7e-22
WP_142780684.1|742536_743382_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_080819450.1|743378_743843_+	hypothetical protein	NA	A0A219VHC5	Ochrobactrum_phage	58.4	1.4e-44
WP_142780685.1|743839_745858_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A219VHD4	Ochrobactrum_phage	53.0	2.2e-137
WP_065656426.1|745936_746968_+	AAA family ATPase	NA	A0A219VHC7	Ochrobactrum_phage	42.1	6.9e-63
WP_142780686.1|746964_747291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142780687.1|747274_747637_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142780688.1|747672_748332_+	DUF3164 family protein	NA	M4STB6	Rhodobacter_phage	53.6	4.0e-56
WP_142780689.1|748342_748780_+	hypothetical protein	NA	R9U4A4	Rhizobium_phage	85.2	2.7e-69
WP_142780690.1|748776_749226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142780691.1|749222_749486_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142781575.1|749472_749778_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142780692.1|749774_750038_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142780693.1|750021_750216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142780694.1|750212_750863_+	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_142780695.1|750862_751090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_035261583.1|751067_751439_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_142780696.1|751545_752289_+	TIGR02594 family protein	NA	R9TRQ2	Rhizobium_phage	41.2	3.8e-31
WP_168208184.1|752411_752588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142780697.1|752584_752950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142780698.1|753160_753379_+	TraR/DksA family transcriptional regulator	NA	A0A219VHE0	Ochrobactrum_phage	55.4	2.2e-11
WP_080866962.1|753375_753750_+	DUF2730 family protein	NA	A0A219VHD8	Ochrobactrum_phage	53.4	1.8e-24
WP_142780699.1|753746_754058_+	hypothetical protein	NA	A0A219VHE1	Ochrobactrum_phage	59.8	4.5e-26
WP_142780700.1|754059_754725_+	DUF3486 family protein	NA	A0A219VH75	Ochrobactrum_phage	78.1	3.2e-77
WP_142780701.1|754890_756573_+	hypothetical protein	NA	A0A219VH72	Ochrobactrum_phage	72.9	1.2e-210
WP_142780702.1|756572_758192_+	DUF935 family protein	NA	M4SPR8	Rhodobacter_phage	43.8	3.3e-112
WP_142780703.1|758311_759409_+	hypothetical protein	NA	J9STS2	Pseudomonas_phage	44.4	6.0e-49
WP_142780704.1|759419_759929_+	phage virion morphogenesis protein	NA	A0A2K9VH22	Faecalibacterium_phage	34.6	1.3e-14
WP_142780705.1|760002_761085_+	hypothetical protein	NA	A0A1B0T6E7	Thiobacimonas_phage	36.1	4.6e-33
WP_080866969.1|761086_761476_+	hypothetical protein	NA	A0A2H4IZH5	uncultured_Caudovirales_phage	35.6	2.2e-06
WP_080866970.1|761485_762379_+	hypothetical protein	NA	J9SVY7	Pseudomonas_phage	43.1	6.4e-65
765396:765412	attR	CCGCCGCCATCAATGCC	NA	NA	NA	NA
