The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP041769	Rhodococcus sp. WB9 chromosome, complete genome	7704423	5329918	5412684	7704423	terminase,lysis,protease,integrase	Rhodococcus_phage(48.0%)	92	5361570:5361605	5412727:5412762
WP_005248181.1|5329918_5331199_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.3	1.6e-141
WP_144287429.1|5331224_5331443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005264334.1|5331439_5332102_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A248SJ97	Salicola_phage	37.7	1.3e-27
WP_005264333.1|5332150_5332738_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	48.9	3.5e-43
WP_005264332.1|5332922_5334317_-	trigger factor	NA	NA	NA	NA	NA
WP_144287430.1|5335745_5336543_-	Fpg/Nei family DNA glycosylase	NA	A0A1V0CNR6	Kaumoebavirus	25.5	6.9e-10
WP_005248193.1|5336549_5337023_-	ribose-5-phosphate isomerase	NA	NA	NA	NA	NA
WP_144287431.1|5337090_5338065_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_141467225.1|5338083_5338713_-	DsbA family protein	NA	NA	NA	NA	NA
WP_144287432.1|5338842_5340078_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.5	9.3e-06
WP_144287433.1|5340150_5342754_+	aminopeptidase N	NA	A0A2K9L1R3	Tupanvirus	32.4	1.5e-45
WP_144287434.1|5342775_5344002_-	DNA polymerase IV	NA	A0A218MNF2	uncultured_virus	27.4	1.4e-17
WP_144287435.1|5344039_5344888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_144287436.1|5344945_5345362_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_005264322.1|5345435_5345915_-	DUF5130 domain-containing protein	NA	NA	NA	NA	NA
WP_005248217.1|5345901_5346162_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287437.1|5346237_5346819_-	HNH endonuclease	NA	H6WG01	Cyanophage	35.5	1.9e-17
WP_005264320.1|5347049_5347445_+	globin	NA	NA	NA	NA	NA
WP_144287438.1|5347512_5349108_+	DUF3459 domain-containing protein	NA	NA	NA	NA	NA
WP_144287439.1|5349095_5350007_+	EamA family transporter	NA	NA	NA	NA	NA
WP_144287440.1|5350014_5350701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005264316.1|5350693_5351119_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_144287441.1|5351115_5356017_-	NAD-glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_037207361.1|5356124_5356550_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_005264313.1|5356551_5358231_-	energy-dependent translational throttle protein EttA	NA	A0A2K9L3Z8	Tupanvirus	27.4	3.0e-47
WP_144287442.1|5358364_5358793_-	single-stranded DNA-binding protein	NA	K4HZ13	Streptomyces_phage	39.5	1.4e-14
WP_144287443.1|5358961_5360992_-	copper resistance protein CopD	NA	NA	NA	NA	NA
WP_005264310.1|5361096_5361474_+	DUF4345 domain-containing protein	NA	NA	NA	NA	NA
5361570:5361605	attL	TCTCTTGGTCGCAGGTTCGAATCCTGCCGGGGGCAC	NA	NA	NA	NA
WP_144287444.1|5362216_5363029_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_144287445.1|5363585_5363804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287446.1|5364213_5364510_+	hypothetical protein	NA	A0A142KB66	Gordonia_phage	72.2	2.8e-09
WP_144287447.1|5364516_5365941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144287448.1|5369515_5369833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287449.1|5369877_5370384_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287450.1|5370376_5370889_-	hypothetical protein	NA	M9MU75	Rhodococcus_phage	33.3	7.0e-08
WP_144287451.1|5370885_5371785_-	hypothetical protein	NA	A7IYC3	Corynebacterium_phage	55.8	1.2e-50
WP_144287452.1|5371784_5372153_-	hypothetical protein	NA	B2ZY33	Ralstonia_phage	35.3	1.7e-11
WP_144287453.1|5372152_5372881_-|lysis	lysis protein	lysis	G9FH99	Rhodococcus_phage	47.6	1.5e-35
WP_144287454.1|5372892_5373150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144287455.1|5373139_5373955_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287456.1|5374021_5374417_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144287457.1|5375006_5375399_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287458.1|5375413_5376991_-	hypothetical protein	NA	G9FH45	Rhodococcus_phage	71.9	2.7e-228
WP_144289155.1|5376997_5377813_-	hypothetical protein	NA	G9FH44	Rhodococcus_phage	58.2	6.2e-83
WP_144287459.1|5377827_5383587_-	transglycosylase SLT domain-containing protein	NA	G9FH43	Rhodococcus_phage	50.9	5.5e-210
WP_144287460.1|5383579_5384404_-	hypothetical protein	NA	G9FH42	Rhodococcus_phage	63.9	3.0e-93
WP_144287461.1|5384407_5384779_-	hypothetical protein	NA	G9FH41	Rhodococcus_phage	70.5	4.4e-44
WP_144287462.1|5384775_5385090_-	hypothetical protein	NA	G9FH40	Rhodococcus_phage	60.0	5.6e-08
WP_144287463.1|5385210_5386143_-	hypothetical protein	NA	G9FH37	Rhodococcus_phage	75.6	1.6e-127
WP_144287464.1|5386219_5386630_-	hypothetical protein	NA	G9FH36	Rhodococcus_phage	75.4	1.2e-55
WP_144287465.1|5386629_5386959_-	hypothetical protein	NA	G9FH35	Rhodococcus_phage	69.7	2.0e-32
WP_144287466.1|5386951_5387275_-	hypothetical protein	NA	G9FH34	Rhodococcus_phage	74.0	1.8e-41
WP_144287467.1|5387276_5387636_-	hypothetical protein	NA	G9FH33	Rhodococcus_phage	54.1	1.6e-27
WP_144287468.1|5387650_5388076_-	lipase chaperone	NA	G9FH32	Rhodococcus_phage	50.7	4.2e-22
WP_144287469.1|5388072_5389011_-	hypothetical protein	NA	G9FH31	Rhodococcus_phage	91.7	7.5e-165
WP_144287470.1|5389036_5389477_-	hypothetical protein	NA	G9FH30	Rhodococcus_phage	73.3	4.1e-49
WP_144287471.1|5389478_5390705_-	hypothetical protein	NA	G9FH29	Rhodococcus_phage	81.0	1.1e-179
WP_144287472.1|5390685_5392002_-	hypothetical protein	NA	G9FH28	Rhodococcus_phage	89.8	1.8e-225
WP_144287473.1|5392009_5393530_-|terminase	terminase	terminase	G9FH27	Rhodococcus_phage	85.4	1.4e-253
WP_144287474.1|5393501_5393852_-	hypothetical protein	NA	G9FH26	Rhodococcus_phage	76.7	6.2e-40
WP_144287475.1|5393987_5394353_-	hypothetical protein	NA	G9FH25	Rhodococcus_phage	73.3	6.2e-51
WP_144287476.1|5394710_5394947_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287477.1|5395410_5396103_-	hypothetical protein	NA	G9FH77	Rhodococcus_phage	44.9	4.8e-36
WP_144287478.1|5396242_5396524_-	NrdH-redoxin	NA	X2KRY7	Enterococcus_phage	46.2	1.6e-06
WP_144287479.1|5396520_5396943_-	hypothetical protein	NA	A0A166Y0Y6	Gordonia_phage	61.3	3.0e-41
WP_144287480.1|5396939_5397179_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287481.1|5397423_5397783_-	hypothetical protein	NA	G9FH13	Rhodococcus_phage	65.3	1.5e-41
WP_144287482.1|5397783_5397999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287483.1|5398153_5398504_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287484.1|5398500_5398806_-	hypothetical protein	NA	G1DTT6	Mycobacterium_virus	56.1	2.0e-18
WP_144287485.1|5398808_5399573_-	hypothetical protein	NA	A0A1B3AYI7	Gordonia_phage	38.7	3.5e-35
WP_144287486.1|5399569_5400031_-	hypothetical protein	NA	A0A1B3AZJ2	Gordonia_phage	41.4	5.7e-25
WP_144287487.1|5400027_5400357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287488.1|5400469_5401567_-	hypothetical protein	NA	A0A1B3B1U8	Gordonia_phage	59.8	6.6e-104
WP_144287489.1|5401610_5402465_-	recE	NA	A0A1B3B1R5	Gordonia_phage	49.8	1.4e-72
WP_144287490.1|5402461_5402785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287491.1|5402784_5403387_-	hypothetical protein	NA	A0A249XQ08	Mycobacterium_phage	48.8	2.5e-44
WP_144287492.1|5403383_5403770_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287493.1|5403766_5404132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287494.1|5404128_5404368_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287495.1|5404364_5404559_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287496.1|5404672_5404885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144289156.1|5405035_5405224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144287497.1|5405358_5405592_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_144287498.1|5405588_5405870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144287499.1|5405866_5406721_-	hypothetical protein	NA	A0A1L6BZH6	Pasteurella_phage	56.0	8.6e-35
WP_144287500.1|5406689_5406962_-	helix-turn-helix domain-containing protein	NA	A0A2H4PEX6	Gordonia_phage	58.9	2.9e-21
WP_144287501.1|5407177_5408335_+	hypothetical protein	NA	A0A142KAZ8	Gordonia_phage	39.0	2.9e-17
WP_144287502.1|5408463_5408895_+	hypothetical protein	NA	A0A088FBM4	Mycobacterium_phage	43.7	4.5e-24
WP_144287503.1|5409242_5410397_+	three-Cys-motif partner protein TcmP	NA	NA	NA	NA	NA
WP_144287504.1|5410393_5411140_-	DUF5131 family protein	NA	A0A2P1A0W3	Gordonia_phage	43.6	1.2e-61
WP_144287505.1|5411418_5412684_+|integrase	tyrosine-type recombinase/integrase	integrase	G9FH48	Rhodococcus_phage	46.4	1.3e-92
5412727:5412762	attR	TCTCTTGGTCGCAGGTTCGAATCCTGCCGGGGGCAC	NA	NA	NA	NA
>prophage 2
NZ_CP041769	Rhodococcus sp. WB9 chromosome, complete genome	7704423	7437348	7480345	7704423	transposase,integrase	Staphylococcus_phage(33.33%)	36	7440018:7440036	7489371:7489389
WP_144289174.1|7437348_7438473_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_054246209.1|7438626_7438959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144288759.1|7438987_7439764_-	cyclase family protein	NA	NA	NA	NA	NA
WP_144288760.1|7439811_7440960_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
7440018:7440036	attL	GGCCGAGTTCCTCGGCCAG	NA	NA	NA	NA
WP_144288761.1|7441079_7442075_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_144288762.1|7442280_7443213_+	oxidoreductase	NA	NA	NA	NA	NA
WP_144288763.1|7443274_7444087_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
WP_144288764.1|7444195_7445374_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_144289256.1|7446493_7447663_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	30.9	2.1e-31
WP_144288765.1|7448609_7448861_+	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	56.2	3.8e-15
WP_144288766.1|7450082_7450328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144288767.1|7450981_7452070_+	alkene reductase	NA	NA	NA	NA	NA
WP_144288768.1|7452137_7452989_+	alpha/beta fold hydrolase	NA	A0A1L7N183	Ralstonia_phage	26.4	2.9e-06
WP_144288769.1|7453141_7453819_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_144288770.1|7454480_7456064_-	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	26.9	1.2e-21
WP_144288771.1|7456078_7457320_-	NADH:flavin oxidoreductase/NADH oxidase family protein	NA	NA	NA	NA	NA
WP_144288772.1|7457860_7458355_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_144288773.1|7458906_7459134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144288774.1|7459418_7460405_-	acryloyl-CoA reductase	NA	NA	NA	NA	NA
WP_144288775.1|7460460_7461294_-	mycofactocin-coupled SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_144288776.1|7461304_7462120_-	mycofactocin-coupled SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_144288777.1|7462235_7464134_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.4	3.1e-53
WP_144288778.1|7464130_7465204_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_144284664.1|7465558_7467454_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_144288779.1|7467568_7468264_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_144288780.1|7468265_7469432_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_144288781.1|7469533_7470004_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_144288782.1|7469908_7470766_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_144288783.1|7471283_7472129_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_144288784.1|7472125_7473028_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_144288785.1|7473027_7474284_-	NADH:flavin oxidoreductase/NADH oxidase family protein	NA	NA	NA	NA	NA
WP_144288786.1|7474368_7474953_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_144288787.1|7475315_7475777_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_144288788.1|7476027_7476312_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_144288789.1|7477475_7479299_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_144288790.1|7479295_7480345_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A166YH27	Gordonia_phage	26.6	4.2e-07
7489371:7489389	attR	GGCCGAGTTCCTCGGCCAG	NA	NA	NA	NA
