The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP041944	Lactobacillus paracasei strain NJ chromosome, complete genome	3083412	170120	197422	3083412	portal,tail,head,tRNA,terminase,capsid	Bacillus_phage(20.0%)	31	NA	NA
WP_003578560.1|170120_171551_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_003569751.1|171552_173007_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_003564470.1|173010_173307_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_003569748.1|173358_174510_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_003569746.1|174519_176544_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.9	2.7e-103
WP_003569744.1|176600_178856_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.3	3.5e-136
WP_003564461.1|179321_179642_+	DUF898 family protein	NA	S5MNN8	Brevibacillus_phage	71.4	2.4e-14
WP_003569742.1|179673_180465_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_003569740.1|180468_181665_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_003564455.1|181800_181977_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003590324.1|182111_183419_+	Y-family DNA polymerase	NA	Q6DMX4	Streptococcus_phage	38.5	1.2e-83
WP_003574405.1|183411_183732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003564448.1|183812_184316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003564445.1|184340_184775_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_003564443.1|185223_185433_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003569732.1|185494_186028_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003564439.1|186296_187772_-	sensor histidine kinase	NA	A0A1X9VNV7	Mimivirus	24.5	4.2e-05
WP_003564436.1|187768_188497_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.7	5.1e-36
WP_003569728.1|188512_188908_-	SdpI family protein	NA	NA	NA	NA	NA
WP_060611747.1|189613_189982_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_003568375.1|190093_190342_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_003568371.1|190357_190498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003574397.1|190979_191273_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_060611785.1|191328_192873_-|capsid	phage major capsid protein	capsid	B8R651	Lactobacillus_phage	25.7	8.8e-38
WP_060611787.1|192859_194041_-|portal	phage portal protein	portal	A0A2H4JB06	uncultured_Caudovirales_phage	35.8	4.3e-61
WP_003574365.1|194045_194225_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144182039.1|194190_195894_-|terminase	terminase large subunit	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	42.5	8.6e-119
WP_144182040.1|195890_196361_-|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
WP_060611789.1|196477_196900_-	HNH endonuclease	NA	A0A1J0MFT4	Staphylococcus_phage	46.2	4.9e-23
WP_003574357.1|196896_197082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016380373.1|197086_197422_-|head	phage head closure protein	head	NA	NA	NA	NA
>prophage 2
NZ_CP041944	Lactobacillus paracasei strain NJ chromosome, complete genome	3083412	643871	721013	3083412	integrase,transposase	Staphylococcus_phage(36.36%)	69	688495:688510	725872:725887
WP_003574021.1|643871_644792_+|transposase	IS30 family transposase	transposase	H7BUM7	unidentified_phage	35.0	5.3e-22
WP_060417290.1|644842_646168_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003567800.1|646173_647133_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.9	8.8e-28
WP_123020086.1|647132_648665_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_101511947.1|648939_649724_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_003581973.1|652086_653409_+	MFS transporter	NA	NA	NA	NA	NA
WP_003581971.1|653516_654287_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_016368446.1|654283_654934_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.8	4.3e-18
WP_003581966.1|654894_655158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016386656.1|655711_656395_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.3	1.8e-59
WP_003581839.1|656486_657158_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_016366710.1|657162_658410_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003581836.1|658387_659131_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.5	1.5e-27
WP_080487858.1|659828_660616_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_003582117.1|662179_662776_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	36.5	5.1e-26
WP_003582114.1|662898_663222_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	42.7	5.2e-17
WP_016368213.1|663273_665004_+	arsenical pump-driving ATPase	NA	NA	NA	NA	NA
WP_003582109.1|665046_666342_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	61.9	2.0e-144
WP_003582108.1|666378_666714_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA	NA
WP_004563097.1|666736_667153_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	56.9	3.9e-33
WP_016386656.1|668123_668807_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.3	1.8e-59
WP_003582346.1|669676_669853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003582348.1|669980_670409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003582350.1|670677_671946_-	NADPH-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	48.2	2.2e-50
WP_003582352.1|671956_672565_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	52.8	1.4e-50
WP_003582354.1|672711_673629_-	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_052915964.1|673940_674783_-|transposase	IS3 family transposase	transposase	Q6J1X2	Lactobacillus_phage	98.9	4.3e-156
WP_016374491.1|674962_675088_-|transposase	IS3 family transposase	transposase	Q6J1X3	Lactobacillus_phage	92.7	1.4e-15
WP_016374492.1|675351_675912_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052915964.1|676139_676982_-|transposase	IS3 family transposase	transposase	Q6J1X2	Lactobacillus_phage	98.9	4.3e-156
WP_108315962.1|677035_677314_-|transposase	transposase	transposase	Q6J1X3	Lactobacillus_phage	94.3	3.9e-29
WP_003582565.1|677527_677995_+	DNA starvation/stationary phase protection protein	NA	A0A222Z0F3	Streptomyces_phage	29.2	1.6e-06
WP_003582569.1|678289_678640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003582572.1|678934_679303_+	YxeA family protein	NA	NA	NA	NA	NA
WP_016382315.1|680156_680585_-	PTS,N-acetylglucosamine/galactosamine EIIA component	NA	NA	NA	NA	NA
WP_003586172.1|680586_681399_-	PTS N-acetylgalactosamine transporter subunit IID	NA	NA	NA	NA	NA
WP_003586170.1|681388_682198_-	PTS N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA	NA
WP_144182064.1|682198_682681_-	PTS N-acetylgalactosamine transporter subunit IIB	NA	NA	NA	NA	NA
WP_003586165.1|682694_683405_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003586163.1|684021_684885_-	glucose uptake protein	NA	NA	NA	NA	NA
WP_032787044.1|685005_687600_-	glycosyl hydrolase family 38	NA	NA	NA	NA	NA
WP_003586160.1|687602_688730_-	PTS fructose transporter subunit IIC	NA	NA	NA	NA	NA
688495:688510	attL	GGGAACATCATGCCAA	NA	NA	NA	NA
WP_003586158.1|688743_689064_-	PTS fructose IIB component	NA	NA	NA	NA	NA
WP_003586156.1|689077_689515_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_144182065.1|689514_691449_-	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_144182066.1|693350_693911_+	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003568823.1|694035_695112_+	dihydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_172618947.1|696432_696585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060611715.1|696604_696892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002816607.1|697212_697896_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.8	2.1e-60
WP_144182067.1|697960_698704_-	TSUP family transporter	NA	NA	NA	NA	NA
WP_082137210.1|698922_699381_+	DUF536 domain-containing protein	NA	NA	NA	NA	NA
WP_144182068.1|700317_701607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041161882.1|701622_702480_-	DNA adenine methylase	NA	A0A1S5PRR3	Streptococcus_phage	52.0	3.0e-80
WP_144182069.1|702634_703216_-	recombinase family protein	NA	M4QQC6	Vibrio_phage	42.3	1.7e-18
WP_144182070.1|703301_703490_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_003572070.1|703591_704308_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_144182071.1|704559_705621_-|transposase	IS30 family transposase	transposase	H7BUM7	unidentified_phage	34.8	1.5e-41
WP_076653767.1|706985_707591_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_144182210.1|707593_708640_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_033572689.1|710075_711056_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_144182072.1|711425_713378_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_076653772.1|713509_714364_+	ROK family protein	NA	NA	NA	NA	NA
WP_076652435.1|715698_716052_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_121494528.1|717389_718073_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	52.4	8.1e-60
WP_019899267.1|718400_718799_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_019899265.1|718819_719077_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010490992.1|719426_719699_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_144182073.1|719750_721013_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
725872:725887	attR	TTGGCATGATGTTCCC	NA	NA	NA	NA
>prophage 3
NZ_CP041944	Lactobacillus paracasei strain NJ chromosome, complete genome	3083412	1663088	1773497	3083412	integrase,transposase,tRNA	Streptococcus_phage(30.77%)	105	1656945:1656958	1691419:1691432
1656945:1656958	attL	CGGCAACGTCACGA	NA	NA	NA	NA
WP_003577897.1|1663088_1664258_-|integrase	site-specific integrase	integrase	Q6J1W6	Lactobacillus_phage	97.9	4.3e-218
WP_003573997.1|1664370_1664631_-	hypothetical protein	NA	B4XYT0	Lactobacillus_phage	40.7	2.5e-09
WP_016368286.1|1664720_1665341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003572177.1|1665324_1665561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003572180.1|1665753_1666461_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_003572182.1|1667673_1668096_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0P0IJN5	Lactobacillus_phage	39.1	7.8e-21
WP_003572184.1|1668088_1668442_-	helix-turn-helix transcriptional regulator	NA	A0A141E1M3	Streptococcus_phage	40.9	7.7e-14
WP_003574003.1|1668685_1668934_+	hypothetical protein	NA	A0A0P0ID24	Lactobacillus_phage	97.5	2.7e-37
WP_003572187.1|1668975_1669176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003572188.1|1669146_1669980_-	TIGR02391 family protein	NA	A0A1S5SBU1	Streptococcus_phage	37.8	2.8e-46
WP_016368112.1|1670040_1670799_+	ORF6C domain-containing protein	NA	A0A1B0YEA7	Lactobacillus_phage	48.9	7.1e-41
WP_003572196.1|1670971_1671223_-	DUF1883 domain-containing protein	NA	NA	NA	NA	NA
WP_003572199.1|1671288_1671645_+	DUF771 domain-containing protein	NA	U5U4L9	Lactobacillus_phage	98.3	2.0e-62
WP_003572201.1|1671729_1671933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003586921.1|1671915_1672461_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003661649.1|1672641_1672956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003589923.1|1672948_1673695_+	DnaD domain protein	NA	A0A0N7IRA7	Lactobacillus_phage	56.1	5.8e-35
WP_003589925.1|1673709_1674534_+	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	75.1	6.6e-117
WP_003574016.1|1674533_1675052_+	exonuclease domain-containing protein	NA	NA	NA	NA	NA
WP_003597560.1|1675098_1675521_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016368116.1|1675522_1676260_+	hypothetical protein	NA	A0A097BY87	Enterococcus_phage	43.6	3.8e-47
WP_010493149.1|1676271_1676559_+	hypothetical protein	NA	Q8LTA8	Lactobacillus_phage	76.8	1.6e-38
WP_032786488.1|1677674_1678007_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010493154.1|1678521_1678965_+	autolysin regulatory protein arpU	NA	A0A0P0IZI6	Lactobacillus_phage	97.3	1.2e-77
WP_003583407.1|1681436_1682435_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	39.5	2.0e-54
WP_003573729.1|1682630_1682849_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010493173.1|1684381_1684717_+	ribonucleoside-diphosphate reductase	NA	A0A0N7IRA2	Lactobacillus_phage	90.6	6.8e-52
WP_076626284.1|1684836_1685169_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_016370120.1|1685198_1685927_+	helix-turn-helix domain-containing protein	NA	A0A0C5AJ29	Paenibacillus_phage	40.1	7.6e-32
WP_074392996.1|1686811_1687141_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_016383623.1|1687378_1689046_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_003569637.1|1689048_1690788_+	alpha-glycosidase	NA	NA	NA	NA	NA
WP_144182118.1|1690906_1693165_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
1691419:1691432	attR	CGGCAACGTCACGA	NA	NA	NA	NA
WP_003569641.1|1693157_1693838_+	beta-phosphoglucomutase	NA	NA	NA	NA	NA
WP_003569644.1|1693830_1694958_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.3	2.3e-19
WP_016383624.1|1694970_1696578_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_003569646.1|1696669_1697902_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003569648.1|1697955_1699314_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003569650.1|1699316_1700174_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003569652.1|1700357_1701314_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_016383626.1|1701895_1702180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003586220.1|1702185_1702836_-	recombinase family protein	NA	M9Q1K0	Clostridium_phage	37.6	1.5e-18
WP_013245909.1|1703177_1704098_+|transposase	IS30 family transposase	transposase	H7BUM7	unidentified_phage	34.5	2.6e-21
WP_144182119.1|1704223_1706926_+	family 15 glucoamylase	NA	NA	NA	NA	NA
WP_144182120.1|1707005_1707689_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.3	1.1e-59
WP_172618956.1|1707957_1709286_+	MFS transporter	NA	NA	NA	NA	NA
WP_144182122.1|1709463_1710250_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_076653364.1|1710381_1710606_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020751459.1|1710696_1713642_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003662080.1|1713649_1714219_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_172618957.1|1715813_1715975_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_013727997.1|1716265_1717174_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_144182123.1|1717598_1718141_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_016387451.1|1718098_1718227_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_003603298.1|1719464_1721144_+	D-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_019900914.1|1721235_1721619_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_016376169.1|1721653_1722475_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_144182124.1|1722484_1723909_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	32.7	2.3e-69
WP_144182125.1|1723955_1725149_+	MFS transporter	NA	NA	NA	NA	NA
WP_144182126.1|1725633_1727058_+|transposase	IS5-like element ISLrh3 family transposase	transposase	NA	NA	NA	NA
WP_144182127.1|1728444_1729374_-|transposase	IS30 family transposase	transposase	H7BW61	unidentified_phage	29.9	5.0e-20
WP_144182213.1|1729637_1730135_+	hypothetical protein	NA	A0A0A8WJ94	Clostridium_phage	48.5	1.7e-14
WP_016366579.1|1730211_1730733_+	hypothetical protein	NA	NA	NA	NA	NA
WP_128538125.1|1730892_1731891_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	39.2	3.3e-54
WP_076652525.1|1732062_1732986_-	conjugal transfer protein	NA	NA	NA	NA	NA
WP_144182128.1|1732982_1733516_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144182129.1|1733525_1734521_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	59.1	4.4e-107
WP_144182130.1|1734517_1736611_-	conjugal transfer protein	NA	A0A1S5SF30	Streptococcus_phage	52.3	2.7e-146
WP_016387580.1|1736597_1739063_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	64.7	0.0e+00
WP_010491186.1|1739046_1739439_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	73.6	6.5e-46
WP_144182131.1|1739500_1739998_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	45.2	1.0e-35
WP_003606383.1|1740001_1740223_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	83.6	1.7e-27
WP_144182132.1|1740378_1741056_-	site-specific DNA-methyltransferase	NA	A0A2K8IKC3	Lactococcus_phage	54.9	1.1e-64
WP_010491196.1|1741186_1741513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076652513.1|1741502_1742693_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	43.7	7.9e-95
WP_144182133.1|1743008_1743269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019898231.1|1743265_1743541_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144182134.1|1743551_1744919_-	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	61.3	3.1e-151
WP_016376177.1|1744915_1745203_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144182135.1|1745222_1745471_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010491209.1|1745505_1745745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016387575.1|1745755_1746019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144182136.1|1746096_1746468_-	DUF961 family protein	NA	A0A1S5SF96	Streptococcus_phage	51.2	8.3e-27
WP_016376174.1|1746485_1746809_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	42.3	1.2e-16
WP_019898235.1|1746850_1747093_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003567685.1|1751592_1752021_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052916118.1|1752120_1752798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016381902.1|1752794_1753442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013246092.1|1753558_1753756_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003581098.1|1753821_1754586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144182137.1|1754646_1756035_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_016380391.1|1756065_1756209_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003567670.1|1756334_1757843_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	39.3	4.1e-72
WP_003567669.1|1758011_1758386_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_003581082.1|1758372_1759509_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	31.8	1.0e-35
WP_003567665.1|1759576_1759825_+	antitoxin	NA	NA	NA	NA	NA
WP_003567661.1|1759844_1760228_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A2K9V2U7	Faecalibacterium_phage	36.1	1.2e-09
WP_003567657.1|1760411_1760933_+	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	32.3	4.6e-07
WP_003581075.1|1761206_1765664_+	glutamate synthase large subunit	NA	NA	NA	NA	NA
WP_003567654.1|1765799_1767233_+	glutamate synthase subunit beta	NA	NA	NA	NA	NA
WP_003567652.1|1767361_1768066_-	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_003567650.1|1768341_1769007_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003571470.1|1769508_1770879_-	peptidoglycan binding domain-containing protein	NA	NA	NA	NA	NA
WP_003567646.1|1771289_1772270_-	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_003567642.1|1772939_1773497_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
>prophage 4
NZ_CP041944	Lactobacillus paracasei strain NJ chromosome, complete genome	3083412	1909805	1919764	3083412	protease,bacteriocin,transposase	unidentified_phage(66.67%)	14	NA	NA
WP_003574021.1|1909805_1910726_-|transposase	IS30 family transposase	transposase	H7BUM7	unidentified_phage	35.0	5.3e-22
WP_144182143.1|1911066_1912020_+	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	24.6	3.7e-10
WP_003567376.1|1912291_1912525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003567374.1|1912521_1912737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003659595.1|1912872_1913181_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003580888.1|1913451_1914048_+	sugar O-acetyltransferase	NA	NA	NA	NA	NA
WP_003580886.1|1914166_1914502_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_003576306.1|1914820_1915012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003580874.1|1915263_1915596_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003580872.1|1916153_1916966_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003567359.1|1917766_1917991_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003574021.1|1918134_1919055_-|transposase	IS30 family transposase	transposase	H7BUM7	unidentified_phage	35.0	5.3e-22
WP_003567358.1|1919367_1919556_+|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_032675994.1|1919590_1919764_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 5
NZ_CP041944	Lactobacillus paracasei strain NJ chromosome, complete genome	3083412	1926473	1977555	3083412	bacteriocin	Bacillus_phage(20.0%)	50	NA	NA
WP_003585563.1|1926473_1927853_+|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_003567340.1|1928026_1928377_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003580849.1|1928449_1928761_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003567335.1|1929066_1930422_+	threonine/serine exporter family protein	NA	NA	NA	NA	NA
WP_003580847.1|1930523_1930820_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_144182144.1|1931012_1931297_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_003567328.1|1931320_1931599_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_003580842.1|1931643_1932432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003580841.1|1932484_1933273_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003567322.1|1933269_1933599_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003580838.1|1933734_1934382_-	helix-turn-helix transcriptional regulator	NA	A0A0S2MVM8	Bacillus_phage	37.5	1.7e-06
WP_003585559.1|1934652_1935708_-	DUF2974 domain-containing protein	NA	NA	NA	NA	NA
WP_003580834.1|1935916_1937113_+	DUF2075 domain-containing protein	NA	NA	NA	NA	NA
WP_003580832.1|1937207_1937765_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003585557.1|1938042_1941048_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_003580827.1|1941049_1942372_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003580826.1|1942368_1943928_+	SpaH/EbpB family LPXTG-anchored major pilin	NA	NA	NA	NA	NA
WP_003580824.1|1943934_1944762_+	class C sortase	NA	NA	NA	NA	NA
WP_003580823.1|1945350_1946574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003580821.1|1946762_1947299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003567298.1|1947552_1947747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003585549.1|1948063_1948897_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	42.4	5.6e-47
WP_003580815.1|1948985_1950242_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	54.0	6.2e-106
WP_003567292.1|1950320_1951553_-	MFS transporter	NA	NA	NA	NA	NA
WP_003567290.1|1951880_1952132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003567288.1|1952356_1952563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003567286.1|1952633_1952891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003567284.1|1953022_1953229_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003585543.1|1953416_1954532_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003567280.1|1954722_1955007_-	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
WP_003580809.1|1955020_1956142_-	low temperature requirement protein A	NA	NA	NA	NA	NA
WP_003576240.1|1956654_1957326_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_003576237.1|1957825_1958449_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_016381637.1|1958610_1961241_+	pyruvate, phosphate dikinase	NA	H8YJB7	Vibrio_phage	40.0	8.4e-89
WP_003567271.1|1961398_1963453_-	potassium transporter Kup	NA	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	33.3	9.5e-64
WP_144182145.1|1963614_1964493_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.4	1.2e-12
WP_172618959.1|1964555_1965752_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003580801.1|1965748_1966849_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003576225.1|1967076_1968423_-	C1 family peptidase	NA	A0A2H4UTL8	Bodo_saltans_virus	29.8	6.9e-47
WP_003571381.1|1968655_1969975_-	C1 family peptidase	NA	R4TV59	Phaeocystis_globosa_virus	34.5	9.2e-60
WP_003567260.1|1970219_1970597_+	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_003567258.1|1970711_1971002_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003567256.1|1971223_1971766_+	dUTP diphosphatase	NA	J9PV85	Bacillus_phage	48.6	8.1e-39
WP_003580798.1|1971782_1973147_+	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_003567252.1|1973168_1974284_+	PIN/TRAM domain-containing protein	NA	NA	NA	NA	NA
WP_003580795.1|1974387_1975284_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_016366635.1|1975564_1976470_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	39.0	1.6e-34
WP_003577837.1|1976473_1977250_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_080596037.1|1977287_1977398_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003577835.1|1977441_1977555_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
