assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007726465.1_ASM772646v1	NZ_CP042046	Staphylococcus aureus strain B2-7A chromosome, complete genome	1	315858-315947	1	CRISPRCasFinder	no	csa3	DEDDh,csa3,WYL,cas3,DinG	Type I-A	CAACTTTAGTTGTTAGGGGCTCTT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,TnsE_C	NA|77aa|up_5|NZ_CP042046.1_310729_310960_-,NA|364aa|up_0|NZ_CP042046.1_314749_315841_+,NA|35aa|down_0|NZ_CP042046.1_316283_316388_-,NA|31aa|down_2|NZ_CP042046.1_318499_318592_+	NA|237aa|up_9|NZ_CP042046.1_306340_307051_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP042046.1_307171_307615_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP042046.1_307814_308228_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP042046.1_308684_310058_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP042046.1_310729_310960_-	NA	NA|313aa|up_4|NZ_CP042046.1_310990_311929_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP042046.1_312364_313030_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP042046.1_313181_313502_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NZ_CP042046.1_313503_314484_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP042046.1_314749_315841_+	NA	NA|35aa|down_0|NZ_CP042046.1_316283_316388_-	NA	NA|379aa|down_1|NZ_CP042046.1_317074_318211_-	pfam02037, SAP, SAP domain	NA|31aa|down_2|NZ_CP042046.1_318499_318592_+	NA	NA|286aa|down_3|NZ_CP042046.1_319296_320154_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_4|NZ_CP042046.1_320221_321004_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_5|NZ_CP042046.1_321235_323041_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_6|NZ_CP042046.1_323721_325260_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_7|NZ_CP042046.1_325294_327427_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_8|NZ_CP042046.1_327438_327873_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_9|NZ_CP042046.1_327872_328979_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional
GCF_007726465.1_ASM772646v1	NZ_CP042046	Staphylococcus aureus strain B2-7A chromosome, complete genome	2	499754-499842	2	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	CCTCTTATGCAGTTGCTCAGTCAACTGTA	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,TnsE_C	NA|190aa|up_5|NZ_CP042046.1_492348_492918_-,NA|62aa|down_6|NZ_CP042046.1_505772_505958_-	NA|535aa|up_9|NZ_CP042046.1_487381_488986_-	TIGR02005, PTS-IIBC-alpha, PTS system, alpha-glucoside-specific IIBC component	NA|255aa|up_8|NZ_CP042046.1_489315_490080_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|169aa|up_7|NZ_CP042046.1_490137_490644_-	COG3832, COG3832, Uncharacterized conserved protein [Function unknown]	NA|438aa|up_6|NZ_CP042046.1_490810_492124_-	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]	NA|190aa|up_5|NZ_CP042046.1_492348_492918_-	NA	NA|294aa|up_4|NZ_CP042046.1_493404_494286_-	PRK07985, PRK07985, SDR family oxidoreductase	NA|374aa|up_3|NZ_CP042046.1_494396_495518_-	cd05669, M20_Acy1_YxeP-like, M20 Peptidase aminoacyclase-1 YxeP-like proteins, including YxeP, YtnL, YjiB and HipO2	NA|413aa|up_2|NZ_CP042046.1_495794_497033_-	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|554aa|up_1|NZ_CP042046.1_497032_498694_-	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|295aa|up_0|NZ_CP042046.1_498853_499738_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|312aa|down_0|NZ_CP042046.1_500050_500986_-	PRK13774, PRK13774, formimidoylglutamase; Provisional	NA|420aa|down_1|NZ_CP042046.1_501275_502535_+	COG1266, COG1266, Predicted metal-dependent membrane protease [General function prediction only]	NA|229aa|down_2|NZ_CP042046.1_502600_503287_-	PRK13978, PRK13978, ribose 5-phosphate isomerase A	NA|218aa|down_3|NZ_CP042046.1_503460_504114_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|340aa|down_4|NZ_CP042046.1_504348_505368_-	cd09019, galactose_mutarotase_like, galactose mutarotase_like	NA|109aa|down_5|NZ_CP042046.1_505397_505724_-	COG1742, COG1742, Uncharacterized conserved protein [Function unknown]	NA|62aa|down_6|NZ_CP042046.1_505772_505958_-	NA	NA|411aa|down_7|NZ_CP042046.1_505941_507174_-	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism]	NA|300aa|down_8|NZ_CP042046.1_507166_508066_-	COG4152, COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|207aa|down_9|NZ_CP042046.1_508296_508917_-	COG3152, COG3152, Predicted membrane protein [Function unknown]
GCF_007726465.1_ASM772646v1	NZ_CP042046	Staphylococcus aureus strain B2-7A chromosome, complete genome	3	1294011-1294112	3	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,TnsE_C	NA|128aa|up_8|NZ_CP042046.1_1285256_1285640_-,NA|93aa|up_6|NZ_CP042046.1_1286594_1286873_-,NA|34aa|up_1|NZ_CP042046.1_1293236_1293338_+,NA|86aa|up_0|NZ_CP042046.1_1293544_1293802_-,NA|221aa|down_1|NZ_CP042046.1_1295202_1295865_-,NA|179aa|down_7|NZ_CP042046.1_1301956_1302493_-,NA|51aa|down_9|NZ_CP042046.1_1304524_1304677_-	NA|194aa|up_9|NZ_CP042046.1_1284609_1285191_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|128aa|up_8|NZ_CP042046.1_1285256_1285640_-	NA	NA|209aa|up_7|NZ_CP042046.1_1285895_1286522_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|93aa|up_6|NZ_CP042046.1_1286594_1286873_-	NA	NA|508aa|up_5|NZ_CP042046.1_1288328_1289852_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_4|NZ_CP042046.1_1289867_1290437_-	TIGR03137, AhpC, peroxiredoxin	NA|252aa|up_3|NZ_CP042046.1_1290928_1291684_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|463aa|up_2|NZ_CP042046.1_1291763_1293152_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|34aa|up_1|NZ_CP042046.1_1293236_1293338_+	NA	NA|86aa|up_0|NZ_CP042046.1_1293544_1293802_-	NA	NA|319aa|down_0|NZ_CP042046.1_1294128_1295085_-	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|221aa|down_1|NZ_CP042046.1_1295202_1295865_-	NA	NA|136aa|down_2|NZ_CP042046.1_1296007_1296415_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|NZ_CP042046.1_1296927_1297506_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|NZ_CP042046.1_1297505_1298774_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|NZ_CP042046.1_1298811_1300278_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|NZ_CP042046.1_1300302_1301844_+	PRK00074, guaA, GMP synthase; Reviewed	NA|179aa|down_7|NZ_CP042046.1_1301956_1302493_-	NA	NA|235aa|down_8|NZ_CP042046.1_1302885_1303590_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|51aa|down_9|NZ_CP042046.1_1304524_1304677_-	NA
GCF_007726465.1_ASM772646v1	NZ_CP042046	Staphylococcus aureus strain B2-7A chromosome, complete genome	4	1538039-1538129	4	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	CAACTGCATAAAAGCCTCTAATCACTAAAG	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,TnsE_C	NA,NA|169aa|down_4|NZ_CP042046.1_1541841_1542348_+,NA|239aa|down_5|NZ_CP042046.1_1542509_1543226_+	NA|211aa|up_9|NZ_CP042046.1_1527789_1528422_+	pfam04276, DUF443, Protein of unknown function (DUF443)	NA|313aa|up_8|NZ_CP042046.1_1528869_1529808_+	cd19083, AKR_AKR11A1_11D1, AKR11A and  AKR11D families of aldo-keto reductase (AKR)	NA|179aa|up_7|NZ_CP042046.1_1530018_1530555_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|159aa|up_6|NZ_CP042046.1_1530723_1531200_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|432aa|up_5|NZ_CP042046.1_1531239_1532535_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|174aa|up_4|NZ_CP042046.1_1532562_1533084_+	pfam08741, YwhD, YwhD family	NA|337aa|up_3|NZ_CP042046.1_1533582_1534593_+	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional	NA|128aa|up_2|NZ_CP042046.1_1534901_1535285_+	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown]	NA|554aa|up_1|NZ_CP042046.1_1535281_1536943_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|212aa|up_0|NZ_CP042046.1_1537276_1537912_+	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|276aa|down_0|NZ_CP042046.1_1538221_1539049_+	cd01143, YvrC, Periplasmic binding protein YvrC	NA|317aa|down_1|NZ_CP042046.1_1539197_1540148_+	pfam01032, FecCD, FecCD transport family	NA|240aa|down_2|NZ_CP042046.1_1540202_1540922_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|267aa|down_3|NZ_CP042046.1_1540905_1541706_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|169aa|down_4|NZ_CP042046.1_1541841_1542348_+	NA	NA|239aa|down_5|NZ_CP042046.1_1542509_1543226_+	NA	NA|263aa|down_6|NZ_CP042046.1_1543394_1544183_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|125aa|down_7|NZ_CP042046.1_1544434_1544809_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|310aa|down_8|NZ_CP042046.1_1545756_1546686_-	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown]	NA|75aa|down_9|NZ_CP042046.1_1546886_1547111_-	pfam11148, DUF2922, Protein of unknown function (DUF2922)
GCF_007726465.1_ASM772646v1	NZ_CP042046	Staphylococcus aureus strain B2-7A chromosome, complete genome	5	1653692-1653774	5	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	CCAATTTCTACAGACAATGCAAGTTGG	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,TnsE_C	NA|69aa|up_9|NZ_CP042046.1_1640349_1640556_+,NA|34aa|down_1|NZ_CP042046.1_1655230_1655332_+,NA|82aa|down_3|NZ_CP042046.1_1656980_1657226_-,NA|89aa|down_6|NZ_CP042046.1_1659026_1659293_+	NA|69aa|up_9|NZ_CP042046.1_1640349_1640556_+	NA	NA|237aa|up_8|NZ_CP042046.1_1640643_1641354_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|335aa|up_7|NZ_CP042046.1_1641337_1642342_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|647aa|up_6|NZ_CP042046.1_1642815_1644756_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|628aa|up_5|NZ_CP042046.1_1645025_1646909_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|594aa|up_4|NZ_CP042046.1_1646920_1648702_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|326aa|up_3|NZ_CP042046.1_1648923_1649901_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|505aa|up_2|NZ_CP042046.1_1649893_1651408_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|353aa|up_1|NZ_CP042046.1_1651647_1652706_+	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional	NA|181aa|up_0|NZ_CP042046.1_1653000_1653543_+	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]	NA|306aa|down_0|NZ_CP042046.1_1654222_1655140_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|34aa|down_1|NZ_CP042046.1_1655230_1655332_+	NA	NA|502aa|down_2|NZ_CP042046.1_1655409_1656915_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|82aa|down_3|NZ_CP042046.1_1656980_1657226_-	NA	NA|167aa|down_4|NZ_CP042046.1_1657255_1657756_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|289aa|down_5|NZ_CP042046.1_1657775_1658642_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|89aa|down_6|NZ_CP042046.1_1659026_1659293_+	NA	NA|133aa|down_7|NZ_CP042046.1_1659442_1659841_+	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism]	NA|702aa|down_8|NZ_CP042046.1_1659803_1661909_+	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|324aa|down_9|NZ_CP042046.1_1662026_1662998_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit
GCF_007726465.1_ASM772646v1	NZ_CP042046	Staphylococcus aureus strain B2-7A chromosome, complete genome	6	1694756-1694836	6	CRISPRCasFinder	no	cas3	DEDDh,csa3,WYL,cas3,DinG	Unclear	TTCTTTATGTTGGGGCCCCGCCAACT	26	1	16	1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810|1694782-1694810	NZ_CP042046.1_2713895-2713867|NZ_CP042046.1_2713950-2713922|NZ_CP042046.1_436469-436497|NZ_CP042046.1_1700216-1700244|NZ_CP042046.1_1743476-1743504|NZ_CP042046.1_1813895-1813923|NZ_CP042046.1_2534581-2534609|NZ_CP042046.1_626387-626359|NZ_CP042046.1_626445-626417|NZ_CP042046.1_1052034-1052006|NZ_CP042046.1_1168758-1168730|NZ_CP042046.1_2049319-2049291|NZ_CP042046.1_2049376-2049348|NZ_CP042046.1_2049433-2049405|NZ_CP042046.1_2049490-2049462|NZ_CP042046.1_2049547-2049519	NA	1	1	Unclear	DEDDh,csa3,WYL,cas3,DinG,TnsE_C	NA|33aa|up_7|NZ_CP042046.1_1685532_1685631_+,NA|36aa|up_5|NZ_CP042046.1_1687206_1687314_+,NA	NA|191aa|up_9|NZ_CP042046.1_1681973_1682546_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|844aa|up_8|NZ_CP042046.1_1682959_1685491_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|33aa|up_7|NZ_CP042046.1_1685532_1685631_+	NA	NA|370aa|up_6|NZ_CP042046.1_1685805_1686916_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|36aa|up_5|NZ_CP042046.1_1687206_1687314_+	NA	NA|280aa|up_4|NZ_CP042046.1_1687461_1688301_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_3|NZ_CP042046.1_1688474_1689125_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_2|NZ_CP042046.1_1689121_1689358_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_1|NZ_CP042046.1_1689626_1691612_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_0|NZ_CP042046.1_1691619_1694466_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|down_0|NZ_CP042046.1_1695072_1696005_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|down_1|NZ_CP042046.1_1696010_1696850_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|down_2|NZ_CP042046.1_1696857_1697343_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|down_3|NZ_CP042046.1_1697350_1698790_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|down_4|NZ_CP042046.1_1698856_1699792_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_5|NZ_CP042046.1_1700498_1701410_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_6|NZ_CP042046.1_1701406_1702402_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_7|NZ_CP042046.1_1702511_1703456_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_8|NZ_CP042046.1_1704029_1704617_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|down_9|NZ_CP042046.1_1704859_1705762_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
GCF_007726465.1_ASM772646v1	NZ_CP042046	Staphylococcus aureus strain B2-7A chromosome, complete genome	7	1743410-1743491	7	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	3	1743434-1743467|1743434-1743467|1743434-1743467	NZ_CP042046.1_2259370-2259337|NZ_CP042046.1_2348571-2348604|NZ_CP042046.1_1052076-1052043	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,TnsE_C	NA|38aa|up_1|NZ_CP042046.1_1742312_1742426_+,NA	NA|206aa|up_9|NZ_CP042046.1_1737168_1737786_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_8|NZ_CP042046.1_1737939_1738434_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_7|NZ_CP042046.1_1738832_1739255_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_6|NZ_CP042046.1_1739402_1740119_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_5|NZ_CP042046.1_1740201_1740741_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_4|NZ_CP042046.1_1740890_1741211_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_3|NZ_CP042046.1_1741354_1741711_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_2|NZ_CP042046.1_1741868_1742249_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|38aa|up_1|NZ_CP042046.1_1742312_1742426_+	NA	NA|293aa|up_0|NZ_CP042046.1_1742427_1743306_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|down_0|NZ_CP042046.1_1744271_1744658_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|NZ_CP042046.1_1744650_1744947_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|NZ_CP042046.1_1745196_1746222_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|NZ_CP042046.1_1746214_1746910_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_4|NZ_CP042046.1_1746927_1747749_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|65aa|down_5|NZ_CP042046.1_1748102_1748297_+	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|284aa|down_6|NZ_CP042046.1_1748530_1749382_-	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|254aa|down_7|NZ_CP042046.1_1749709_1750471_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|436aa|down_8|NZ_CP042046.1_1750568_1751876_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|414aa|down_9|NZ_CP042046.1_1751990_1753232_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily
GCF_007726465.1_ASM772646v1	NZ_CP042046	Staphylococcus aureus strain B2-7A chromosome, complete genome	8	2049582-2049667	8	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	AAAGTCAGCTTACAATAATGTGCAAGTTGG	30	1	10	2049612-2049637|2049612-2049637|2049612-2049637|2049612-2049637|2049612-2049637|2049612-2049637|2049612-2049637|2049612-2049637|2049612-2049637|2049612-2049637	NZ_CP042046.1_1052099-1052124|NZ_CP042046.1_869438-869413|NZ_CP042046.1_1743794-1743769|NZ_CP042046.1_1743850-1743825|NZ_CP042046.1_1743906-1743881|NZ_CP042046.1_1743962-1743937|NZ_CP042046.1_1663164-1663189|NZ_CP042046.1_1792679-1792704|NZ_CP042046.1_601070-601045|NZ_CP042046.1_869494-869469	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,TnsE_C	NA|169aa|up_8|NZ_CP042046.1_2043047_2043554_+,NA|62aa|up_5|NZ_CP042046.1_2045636_2045822_-,NA|83aa|up_4|NZ_CP042046.1_2046031_2046280_-,NA|78aa|up_3|NZ_CP042046.1_2046443_2046677_-,NA|49aa|up_1|NZ_CP042046.1_2048785_2048932_+,NA|75aa|up_0|NZ_CP042046.1_2048888_2049113_+,NA|76aa|down_6|NZ_CP042046.1_2056583_2056811_+	NA|134aa|up_9|NZ_CP042046.1_2041976_2042378_-	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed	NA|169aa|up_8|NZ_CP042046.1_2043047_2043554_+	NA	NA|166aa|up_7|NZ_CP042046.1_2043813_2044311_+	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal	NA|117aa|up_6|NZ_CP042046.1_2044464_2044815_+	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN	NA|62aa|up_5|NZ_CP042046.1_2045636_2045822_-	NA	NA|83aa|up_4|NZ_CP042046.1_2046031_2046280_-	NA	NA|78aa|up_3|NZ_CP042046.1_2046443_2046677_-	NA	NA|320aa|up_2|NZ_CP042046.1_2047153_2048113_-	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|49aa|up_1|NZ_CP042046.1_2048785_2048932_+	NA	NA|75aa|up_0|NZ_CP042046.1_2048888_2049113_+	NA	NA|239aa|down_0|NZ_CP042046.1_2049842_2050559_-	PRK13350, PRK13350, superantigen-like protein; Reviewed	NA|242aa|down_1|NZ_CP042046.1_2050666_2051392_-	PRK13349, PRK13349, superantigen-like protein; Reviewed	NA|242aa|down_2|NZ_CP042046.1_2051486_2052212_-	PRK13043, PRK13043, superantigen-like protein; Reviewed	NA|334aa|down_3|NZ_CP042046.1_2052649_2053651_+	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional	NA|292aa|down_4|NZ_CP042046.1_2053673_2054549_+	PRK12353, PRK12353, putative amino acid kinase; Reviewed	NA|502aa|down_5|NZ_CP042046.1_2054771_2056277_+	COG1288, COG1288, Predicted membrane protein [Function unknown]	NA|76aa|down_6|NZ_CP042046.1_2056583_2056811_+	NA	NA|316aa|down_7|NZ_CP042046.1_2057116_2058064_-	cd09325, TDT_C4-dicarb_trans, C4-dicarboxylate transporters of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family	NA|63aa|down_8|NZ_CP042046.1_2058312_2058501_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|440aa|down_9|NZ_CP042046.1_2059036_2060356_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_007726465.1_ASM772646v1	NZ_CP042046	Staphylococcus aureus strain B2-7A chromosome, complete genome	9	2534524-2534606	9	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	TGCATTGCCTGTAGAATTTCTTTTCG	26	1	1	2534550-2534580	NZ_CP042046.1_2049578-2049548	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG,TnsE_C	NA,NA	NA|228aa|up_9|NZ_CP042046.1_2523723_2524407_-	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]	NA|59aa|up_8|NZ_CP042046.1_2524650_2524827_-	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|449aa|up_7|NZ_CP042046.1_2525119_2526466_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|251aa|up_6|NZ_CP042046.1_2526472_2527225_-	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown]	NA|313aa|up_5|NZ_CP042046.1_2527226_2528165_-	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|380aa|up_4|NZ_CP042046.1_2528168_2529308_-	PRK14280, PRK14280, molecular chaperone DnaJ	NA|611aa|up_3|NZ_CP042046.1_2529443_2531276_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|209aa|up_2|NZ_CP042046.1_2531344_2531971_-	PRK14140, PRK14140, heat shock protein GrpE; Provisional	NA|326aa|up_1|NZ_CP042046.1_2532002_2532980_-	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA	NA|375aa|up_0|NZ_CP042046.1_2533080_2534205_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|608aa|down_0|NZ_CP042046.1_2534824_2536648_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|84aa|down_1|NZ_CP042046.1_2536993_2537245_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|325aa|down_2|NZ_CP042046.1_2537289_2538264_-	PRK05574, holA, DNA polymerase III subunit delta; Reviewed	NA|716aa|down_3|NZ_CP042046.1_2538320_2540468_-	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|154aa|down_4|NZ_CP042046.1_2540526_2540988_-	TIGR02571, putative_dCMP_deaminase, ComE operon protein 2	NA|229aa|down_5|NZ_CP042046.1_2541079_2541766_-	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]	NA|239aa|down_6|NZ_CP042046.1_2541805_2542522_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|118aa|down_7|NZ_CP042046.1_2542524_2542878_-	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|195aa|down_8|NZ_CP042046.1_2542878_2543463_-	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]	NA|190aa|down_9|NZ_CP042046.1_2543452_2544022_-	TIGR00482, Probable_nicotinate-nucleotide_adenylyltransferase, nicotinate (nicotinamide) nucleotide adenylyltransferase
