The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP041061	Micromonospora sp. HM134 chromosome, complete genome	7565212	451126	487294	7565212	terminase,portal,holin,tail,integrase	Mycobacterium_phage(38.46%)	60	443489:443505	456634:456650
443489:443505	attL	TGCTGCTGCTCGCCGCC	NA	NA	NA	NA
WP_145922526.1|451126_451561_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A059VKS6	Mycobacterium_phage	37.2	1.1e-06
WP_145917511.1|452599_453049_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_145917512.1|453233_453533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917513.1|453529_453736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917514.1|454056_454878_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917515.1|454874_455201_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917516.1|455206_456019_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_145917517.1|456015_456375_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917518.1|456371_456674_+	hypothetical protein	NA	NA	NA	NA	NA
456634:456650	attR	TGCTGCTGCTCGCCGCC	NA	NA	NA	NA
WP_145917519.1|456670_456955_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917520.1|456954_457476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917521.1|457472_457934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917522.1|457930_458434_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917523.1|458430_458673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917524.1|458669_459614_+	hypothetical protein	NA	A0A0R8VB90	Thermobifida_phage	46.7	1.1e-70
WP_145917525.1|459610_459928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917526.1|459924_460827_+	hypothetical protein	NA	A0A2P1CGD3	Mycobacterium_phage	58.8	6.2e-76
WP_145917527.1|460823_461060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917528.1|461056_461314_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917529.1|461313_461925_+	crossover junction endodeoxyribonuclease RuvC	NA	A0A2P1JX93	Rhodococcus_phage	40.2	6.4e-08
WP_145917530.1|461921_462863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917531.1|462855_463047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917532.1|463037_463487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917533.1|463483_463738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917534.1|463734_464097_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917535.1|464093_464459_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168222367.1|464455_464614_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917536.1|464610_464838_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917537.1|464834_465122_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917538.1|465357_466392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917539.1|466639_466999_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917540.1|466995_467265_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917541.1|467261_467468_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917542.1|467464_467737_+	hypothetical protein	NA	A0A142K9Y6	Gordonia_phage	46.8	2.3e-10
WP_145917543.1|467733_468042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168222368.1|468038_468329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917545.1|468397_469411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917546.1|469423_470089_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922527.1|470115_470370_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168222369.1|470549_470930_+|holin	holin	holin	A0A2P0ZZY2	Mycobacterium_phage	45.8	2.9e-19
WP_145917547.1|471020_471539_+	HNH endonuclease	NA	A0A2K9VGY0	Gordonia_phage	56.2	6.2e-20
WP_145917548.1|471663_472176_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H5BLR0	Streptomyces_phage	58.5	3.0e-43
WP_145922529.1|472213_473890_+|terminase	terminase large subunit	terminase	A0A2H5BLT3	Streptomyces_phage	59.8	1.8e-193
WP_145917549.1|473894_475373_+|portal	phage portal protein	portal	A0A1J0GVC9	Mycobacterium_phage	38.5	1.5e-66
WP_145917550.1|475362_476427_+	hypothetical protein	NA	A0A1C9EHV4	Gordonia_phage	39.7	7.7e-41
WP_145917552.1|477143_478328_+	DUF5309 family protein	NA	A0A068F8K1	Mycobacterium_phage	42.7	1.1e-75
WP_145917553.1|478340_478913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917554.1|478940_479501_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917555.1|479513_479927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917556.1|479932_480877_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917557.1|480886_481285_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917558.1|481284_481671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917559.1|481670_482093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917560.1|482089_482464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145917561.1|482540_482876_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917562.1|482932_483145_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917563.1|483144_483615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917564.1|483611_484145_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917565.1|484177_484498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168222370.1|484516_487294_+|tail	phage tail tape measure protein	tail	I3NL90	Bifidobacterium_phage	42.5	1.1e-78
>prophage 2
NZ_CP041061	Micromonospora sp. HM134 chromosome, complete genome	7565212	669424	681814	7565212	tail,plate	Bacillus_phage(100.0%)	10	NA	NA
WP_145917716.1|669424_670984_+|tail	phage tail sheath family protein	tail	J9PVC2	Bacillus_phage	33.5	2.7e-66
WP_088643766.1|671040_671523_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_145917717.1|671509_671926_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145917718.1|672770_675251_+	DUF4157 domain-containing protein	NA	NA	NA	NA	NA
WP_088643770.1|675334_675820_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_168222374.1|675828_676950_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_145917720.1|676963_678889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088643773.1|678897_679326_+	GPW/gp25 family protein	NA	NA	NA	NA	NA
WP_145917721.1|679325_681266_+|plate	putative baseplate assembly protein	plate	NA	NA	NA	NA
WP_145917722.1|681265_681814_+|tail	phage tail protein	tail	NA	NA	NA	NA
>prophage 3
NZ_CP041061	Micromonospora sp. HM134 chromosome, complete genome	7565212	5013051	5064285	7565212	transposase	Burkholderia_phage(14.29%)	34	NA	NA
WP_168222384.1|5013051_5014566_-|transposase	ISL3 family transposase	transposase	A9YX10	Burkholderia_phage	30.1	5.0e-09
WP_168222529.1|5014689_5015166_-	ricin-type beta-trefoil lectin domain protein	NA	NA	NA	NA	NA
WP_088642401.1|5015478_5015808_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145920639.1|5015773_5016439_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_145920640.1|5016577_5016850_+|transposase	transposase	transposase	A0A0M5M147	Mycobacterium_phage	55.7	1.4e-18
WP_168222530.1|5017234_5021608_+	hypothetical protein	NA	A5LH53	Enterobacteria_phage	35.0	6.4e-25
WP_168222531.1|5022417_5022732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145920643.1|5023250_5024282_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_168222532.1|5024285_5026934_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_168222533.1|5027053_5029003_+	Ig-like domain repeat protein	NA	NA	NA	NA	NA
WP_145919019.1|5029290_5030439_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.6	1.9e-45
WP_145922919.1|5032868_5034068_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_145920646.1|5035339_5035618_-	type I-E CRISPR-associated endoribonuclease Cas2	NA	NA	NA	NA	NA
WP_145920647.1|5035614_5036607_-	type I-E CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_145920648.1|5036608_5037340_-	type I-E CRISPR-associated protein Cas6/Cse3/CasE	NA	NA	NA	NA	NA
WP_145920649.1|5037345_5038155_-	type I-E CRISPR-associated protein Cas5/CasD	NA	NA	NA	NA	NA
WP_145920650.1|5038151_5039312_-	type I-E CRISPR-associated protein Cas7/Cse4/CasC	NA	NA	NA	NA	NA
WP_145920651.1|5039370_5039955_-	type I-E CRISPR-associated protein Cse2/CasB	NA	NA	NA	NA	NA
WP_145922920.1|5039951_5041547_-	type I-E CRISPR-associated protein Cse1/CasA	NA	NA	NA	NA	NA
WP_145920652.1|5041884_5044650_-	CRISPR-associated helicase Cas3'	NA	NA	NA	NA	NA
WP_168222534.1|5047718_5048699_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_145920654.1|5048695_5050720_-	DEAD/DEAH box helicase family protein	NA	A0A1V0SHP4	Klosneuvirus	25.7	6.8e-22
WP_145920655.1|5050716_5051841_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145920656.1|5051934_5053071_-	class II histone deacetylase	NA	A0A2K9L2T7	Tupanvirus	35.3	2.4e-40
WP_145920657.1|5053187_5054456_-	histidine decarboxylase	NA	M1HWX9	Paramecium_bursaria_Chlorella_virus	33.1	8.9e-36
WP_145922921.1|5054452_5055049_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145920658.1|5055490_5056948_-	APC family permease	NA	NA	NA	NA	NA
WP_145920659.1|5056944_5057277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145922922.1|5057459_5058137_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_145922923.1|5058145_5059345_-	oxidoreductase	NA	NA	NA	NA	NA
WP_168222535.1|5059610_5061278_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_145922924.1|5061274_5061775_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_145920660.1|5061959_5063120_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_145920661.1|5063160_5064285_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP041061	Micromonospora sp. HM134 chromosome, complete genome	7565212	7297955	7356219	7565212	transposase,integrase	Gordonia_phage(28.57%)	50	7327215:7327233	7366134:7366152
WP_145922294.1|7297955_7299422_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B0T6A8	Bacillus_phage	31.5	1.1e-32
WP_145922295.1|7299512_7299785_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_145919019.1|7299883_7301032_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.6	1.9e-45
WP_168222592.1|7301714_7305551_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_168222593.1|7305767_7306082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922297.1|7306149_7306632_+	DUF2690 domain-containing protein	NA	NA	NA	NA	NA
WP_145922298.1|7306737_7307535_-	hypothetical protein	NA	A0A1D8EUL4	Mycobacterium_phage	40.4	2.7e-30
WP_145922299.1|7307503_7308061_-	DNA cytosine methyltransferase	NA	A0A142KA64	Gordonia_phage	46.0	2.4e-46
WP_145922300.1|7308057_7308918_-	hypothetical protein	NA	C8CHK2	Thermus_virus	44.3	6.6e-51
WP_145922301.1|7308914_7309931_-	site-specific DNA-methyltransferase	NA	A0A2I5ARE4	Synechococcus_phage	33.0	2.6e-06
WP_145922302.1|7309878_7310805_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145922303.1|7311625_7312504_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922304.1|7312699_7313596_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145922305.1|7314328_7314709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922306.1|7314715_7315630_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145923104.1|7315668_7316595_+	PrgI family protein	NA	NA	NA	NA	NA
WP_145922307.1|7316591_7318361_+	DUF87 domain-containing protein	NA	NA	NA	NA	NA
WP_145922308.1|7318742_7319066_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_145922309.1|7319069_7319615_+	PspC domain-containing protein	NA	NA	NA	NA	NA
WP_145923105.1|7319836_7320175_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_145922310.1|7320167_7321253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922311.1|7321464_7321803_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145922312.1|7322001_7322985_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145922313.1|7323328_7325812_+	DUF87 domain-containing protein	NA	NA	NA	NA	NA
WP_145922314.1|7326024_7326900_+	hypothetical protein	NA	NA	NA	NA	NA
7327215:7327233	attL	CCCACCCGCCCCACCCAGG	NA	NA	NA	NA
WP_145922315.1|7327375_7328077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922316.1|7328106_7328547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922317.1|7328976_7330167_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922318.1|7330163_7330511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922319.1|7330702_7331623_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922320.1|7331713_7332391_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_145922321.1|7332489_7333074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922322.1|7333196_7333610_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922323.1|7333828_7334197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145923106.1|7334193_7335579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145922324.1|7335898_7336393_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168222354.1|7336389_7336533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145922325.1|7337434_7338382_-	DUF4253 domain-containing protein	NA	NA	NA	NA	NA
WP_145922326.1|7338505_7339165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922327.1|7340657_7341164_+	hypothetical protein	NA	NA	NA	NA	NA
WP_145922328.1|7341156_7343586_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_145922329.1|7343592_7345995_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_145923107.1|7345991_7347242_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_145923108.1|7348137_7349235_+	AAA domain-containing protein	NA	A0A0K0N7E9	Gordonia_phage	35.8	1.5e-36
WP_145922330.1|7349248_7350889_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_168222594.1|7351104_7351530_+	DUF3085 domain-containing protein	NA	NA	NA	NA	NA
WP_145922332.1|7351624_7352080_-	DUF2690 domain-containing protein	NA	NA	NA	NA	NA
WP_145922333.1|7352187_7352802_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_145922276.1|7354061_7354898_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_145923109.1|7355097_7356219_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
7366134:7366152	attR	CCCACCCGCCCCACCCAGG	NA	NA	NA	NA
