assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007954765.1_ASM795476v1	NZ_CP042409	Lactococcus lactis strain CBA3619 plasmid unnamed, complete sequence	1	37057-37211	1	PILER-CR	no		csa3	Orphan	AATACAACATTTTTACGTCATA	22	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,csa3,DinG,RT	NA|52aa|up_7|NZ_CP042409.1_29815_29971_+,NA|78aa|up_1|NZ_CP042409.1_34854_35088_-,NA|94aa|down_6|NZ_CP042409.1_46843_47125_+	NA|300aa|up_9|NZ_CP042409.1_27877_28777_-	pfam18864, AbiTii, AbiTii	NA|226aa|up_8|NZ_CP042409.1_29009_29687_+	pfam13676, TIR_2, TIR domain	NA|52aa|up_7|NZ_CP042409.1_29815_29971_+	NA	NA|194aa|up_6|NZ_CP042409.1_29975_30557_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|250aa|up_5|NZ_CP042409.1_31559_32309_-	TIGR01528, Protein_pnuC	NA|237aa|up_4|NZ_CP042409.1_32503_33214_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|243aa|up_3|NZ_CP042409.1_33354_34083_-	cd16406, ParB_N_like, ParB N-terminal, parA-binding, -like domain of bacterial and plasmid parABS partitioning systems	NA|253aa|up_2|NZ_CP042409.1_34086_34845_-	pfam13614, AAA_31, AAA domain	NA|78aa|up_1|NZ_CP042409.1_34854_35088_-	NA	NA|451aa|up_0|NZ_CP042409.1_35598_36951_-	pfam01051, Rep_3, Initiator Replication protein	NA|621aa|down_0|NZ_CP042409.1_39452_41315_+	cd02079, P-type_ATPase_HM, P-type heavy metal-transporting ATPase	NA|76aa|down_1|NZ_CP042409.1_42017_42245_+	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]	NA|182aa|down_2|NZ_CP042409.1_42293_42839_+	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain	NA|230aa|down_3|NZ_CP042409.1_42924_43614_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|202aa|down_4|NZ_CP042409.1_44262_44868_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|151aa|down_5|NZ_CP042409.1_45365_45818_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|94aa|down_6|NZ_CP042409.1_46843_47125_+	NA	NA|59aa|down_7|NZ_CP042409.1_47456_47633_+	pfam16935, Hol_Tox, Putative Holin-like Toxin (Hol-Tox)	NA|404aa|down_8|NZ_CP042409.1_48007_49219_-	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|202aa|down_9|NZ_CP042409.1_49272_49878_-	COG0431, COG0431, Predicted flavoprotein [General function prediction only]
GCF_007954765.1_ASM795476v1	NZ_CP042408	Lactococcus lactis strain CBA3619 chromosome, complete genome	1	866433-866526	1	CRISPRCasFinder	no		DEDDh,cas3,csa3,DinG,RT	Orphan	CAGCTTACTGAACCTTCTTTTATTCA	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,RT	NA,NA|185aa|down_3|NZ_CP042408.1_870533_871088_-	NA|209aa|up_9|NZ_CP042408.1_857833_858460_-	COG4915, XpaC, 5-bromo-4-chloroindolyl phosphate hydrolysis protein [General function prediction only]	NA|342aa|up_8|NZ_CP042408.1_858651_859677_+	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|314aa|up_7|NZ_CP042408.1_859719_860661_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|136aa|up_6|NZ_CP042408.1_860731_861139_+	COG5341, COG5341, Uncharacterized protein conserved in bacteria [Function unknown]	NA|177aa|up_5|NZ_CP042408.1_861135_861666_+	COG4769, COG4769, Predicted membrane protein [Function unknown]	NA|320aa|up_4|NZ_CP042408.1_861656_862616_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|239aa|up_3|NZ_CP042408.1_862612_863329_+	COG0357, GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane]	NA|238aa|up_2|NZ_CP042408.1_863810_864524_-	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	NA|312aa|up_1|NZ_CP042408.1_864602_865538_-	PRK07259, PRK07259, dihydroorotate dehydrogenase	NA|263aa|up_0|NZ_CP042408.1_865611_866400_-	cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase	NA|455aa|down_0|NZ_CP042408.1_866798_868163_-	cd17503, MFS_LmrB_MDR_like, Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|239aa|down_1|NZ_CP042408.1_868325_869042_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|481aa|down_2|NZ_CP042408.1_869098_870541_-	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|185aa|down_3|NZ_CP042408.1_870533_871088_-	NA	NA|279aa|down_4|NZ_CP042408.1_871084_871921_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|300aa|down_5|NZ_CP042408.1_871920_872820_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|440aa|down_6|NZ_CP042408.1_872905_874225_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|309aa|down_7|NZ_CP042408.1_874342_875269_-	cd19606, GH113-like, Glycoside hydrolase family 113 beta-mannosidase and similar proteins	NA|313aa|down_8|NZ_CP042408.1_875367_876306_+	pfam05448, AXE1, Acetyl xylan esterase (AXE1)	NA|404aa|down_9|NZ_CP042408.1_876472_877684_+	COG4260, COG4260, Membrane protease subunit, stomatin/prohibitin family [Amino acid    transport and metabolism]
GCF_007954765.1_ASM795476v1	NZ_CP042408	Lactococcus lactis strain CBA3619 chromosome, complete genome	2	1231715-1231816	2	CRISPRCasFinder	no	csa3	DEDDh,cas3,csa3,DinG,RT	Type I-A	ACTGACAGAACTTCCAGCAGAGCTGTCAGT	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,DinG,RT	NA|78aa|up_9|NZ_CP042408.1_1216352_1216586_-,NA	NA|78aa|up_9|NZ_CP042408.1_1216352_1216586_-	NA	NA|247aa|up_8|NZ_CP042408.1_1218280_1219021_-	pfam01209, Ubie_methyltran, ubiE/COQ5 methyltransferase family	NA|902aa|up_7|NZ_CP042408.1_1219118_1221824_-	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|478aa|up_6|NZ_CP042408.1_1222082_1223516_-	PRK09593, arb, 6-phospho-beta-glucosidase; Reviewed	NA|89aa|up_5|NZ_CP042408.1_1223636_1223903_-	COG0759, COG0759, Uncharacterized conserved protein [Function unknown]	NA|581aa|up_4|NZ_CP042408.1_1224019_1225762_-	PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|457aa|up_3|NZ_CP042408.1_1225909_1227280_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|226aa|up_2|NZ_CP042408.1_1227373_1228051_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|325aa|up_1|NZ_CP042408.1_1228219_1229194_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|752aa|up_0|NZ_CP042408.1_1229346_1231602_-	PRK13807, PRK13807, maltose phosphorylase; Provisional	NA|525aa|down_0|NZ_CP042408.1_1233448_1235023_-	cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)	NA|204aa|down_1|NZ_CP042408.1_1235012_1235624_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|542aa|down_2|NZ_CP042408.1_1235644_1237270_-	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins	NA|585aa|down_3|NZ_CP042408.1_1237476_1239231_-	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins	NA|410aa|down_4|NZ_CP042408.1_1239598_1240828_+	COG2182, MalE, Maltose-binding periplasmic proteins/domains [Carbohydrate transport and metabolism]	NA|453aa|down_5|NZ_CP042408.1_1240899_1242258_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|286aa|down_6|NZ_CP042408.1_1242261_1243119_+	COG3833, MalG, ABC-type maltose transport systems, permease component [Carbohydrate transport and metabolism]	NA|192aa|down_7|NZ_CP042408.1_1243248_1243824_-	pfam02517, Abi, CAAX protease self-immunity	NA|373aa|down_8|NZ_CP042408.1_1244049_1245168_-	PRK11281, PRK11281, mechanosensitive channel MscK	NA|69aa|down_9|NZ_CP042408.1_1246170_1246377_-	COG3655, COG3655, Predicted transcriptional regulator [Transcription]
